Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002182A_C01 KMC002182A_c01
(669 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568221.1| protein kinase; protein id: At5g09890.1, suppor... 142 3e-33
gb|AAM63223.1| protein kinase [Arabidopsis thaliana] 142 3e-33
dbj|BAB09410.1| protein kinase [Arabidopsis thaliana] 110 1e-23
pir||A86170 hypothetical protein [imported] - Arabidopsis thalia... 89 4e-17
pir||S42864 protein kinase (EC 2.7.1.-) - common ice plant (frag... 89 7e-17
>ref|NP_568221.1| protein kinase; protein id: At5g09890.1, supported by cDNA:
206518., supported by cDNA: gi_14334481, supported by
cDNA: gi_15147868, supported by cDNA: gi_16323449
[Arabidopsis thaliana] gi|14334482|gb|AAK59439.1|
putative protein kinase [Arabidopsis thaliana]
gi|15147869|dbj|BAB62845.1| Ndr kinase [Arabidopsis
thaliana] gi|16323450|gb|AAL15219.1| putative protein
kinase [Arabidopsis thaliana]
Length = 515
Score = 142 bits (359), Expect = 3e-33
Identities = 65/94 (69%), Positives = 82/94 (87%)
Frame = -1
Query: 669 LYEMEAAFKPTVNGDLDTQNFEKFPDVDGPPSSTTTVGPWRKMLTSKDNNFIGYTYKKSD 490
LY+MEAA++P V+G+LDTQNFEKFP+V+G PS VGPWRKMLTSKD NFIG+T+KKSD
Sbjct: 412 LYDMEAAYRPIVDGELDTQNFEKFPEVEGSPSEAPQVGPWRKMLTSKDTNFIGFTFKKSD 471
Query: 489 ILKSLESSDADIRVNGSSNAPSLISLLGRIDLQD 388
I +S+ESS AD++ NGS APSLISLLGRI++++
Sbjct: 472 ITRSMESSGADMKSNGSGEAPSLISLLGRINMEE 505
>gb|AAM63223.1| protein kinase [Arabidopsis thaliana]
Length = 515
Score = 142 bits (359), Expect = 3e-33
Identities = 65/94 (69%), Positives = 82/94 (87%)
Frame = -1
Query: 669 LYEMEAAFKPTVNGDLDTQNFEKFPDVDGPPSSTTTVGPWRKMLTSKDNNFIGYTYKKSD 490
LY+MEAA++P V+G+LDTQNFEKFP+V+G PS VGPWRKMLTSKD NFIG+T+KKSD
Sbjct: 412 LYDMEAAYRPIVDGELDTQNFEKFPEVEGSPSEAPQVGPWRKMLTSKDTNFIGFTFKKSD 471
Query: 489 ILKSLESSDADIRVNGSSNAPSLISLLGRIDLQD 388
I +S+ESS AD++ NGS APSLISLLGRI++++
Sbjct: 472 ITRSMESSGADMKSNGSGEAPSLISLLGRINMEE 505
>dbj|BAB09410.1| protein kinase [Arabidopsis thaliana]
Length = 495
Score = 110 bits (276), Expect = 1e-23
Identities = 49/68 (72%), Positives = 60/68 (88%)
Frame = -1
Query: 669 LYEMEAAFKPTVNGDLDTQNFEKFPDVDGPPSSTTTVGPWRKMLTSKDNNFIGYTYKKSD 490
LY+MEAA++P V+G+LDTQNFEKFP+V+G PS VGPWRKMLTSKD NFIG+T+KKSD
Sbjct: 412 LYDMEAAYRPIVDGELDTQNFEKFPEVEGSPSEAPQVGPWRKMLTSKDTNFIGFTFKKSD 471
Query: 489 ILKSLESS 466
I +S+ESS
Sbjct: 472 ITRSMESS 479
>pir||A86170 hypothetical protein [imported] - Arabidopsis thaliana
gi|4204296|gb|AAD10677.1| putative protien kinase
[Arabidopsis thaliana]
Length = 569
Score = 89.4 bits (220), Expect = 4e-17
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Frame = -1
Query: 669 LYEMEAAFKPTVNGDLDTQNFEKFPDVDGPPSSTTTVGPWRKMLTSKDNNFIGYTYKKSD 490
+Y+MEAAF P VN DLDTQNFEKF + D + + GPWRKML+SKD NF+GYTYK +
Sbjct: 443 IYQMEAAFIPEVNDDLDTQNFEKFDEEDNQTQAPSRTGPWRKMLSSKDINFVGYTYKNFE 502
Query: 489 ILKSLE-SSDADIRVNGS-SNAPSLISLLGRIDLQDTSIPENEQK 361
I+ + A+++ S S PS+ SL G D+S +EQ+
Sbjct: 503 IVNDYQVPGIAELKKKESKSKRPSVKSLFG--TESDSSSSGSEQQ 545
>pir||S42864 protein kinase (EC 2.7.1.-) - common ice plant (fragment)
Length = 479
Score = 88.6 bits (218), Expect = 7e-17
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = -1
Query: 669 LYEMEAAFKPTVNGDLDTQNFEKFPDVDGPPSSTTTVGPWRKMLTSKDNNFIGYTYKKSD 490
+Y+MEAAF P VN +LDTQNFEKF + D ST+ GPWRKML+SKD NF+GYTYK +
Sbjct: 346 IYQMEAAFIPEVNDELDTQNFEKFEEADNSSQSTSKAGPWRKMLSSKDLNFVGYTYKNFE 405
Query: 489 ILKSLE 472
I+ +
Sbjct: 406 IVNDYQ 411
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 573,883,996
Number of Sequences: 1393205
Number of extensions: 12141237
Number of successful extensions: 30098
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 29172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30069
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29138478756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
