Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002174A_C01 KMC002174A_c01
(802 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193194.1| SNF1 like protein kinase; protein id: At4g14580... 82 8e-21
ref|NP_188940.1| SNF1 related protein kinase (ATSRPK1); protein ... 77 1e-19
dbj|BAB11738.1| serine/threonine protein kinase [Arabidopsis tha... 77 1e-19
gb|AAK96877.1| SNF1 related protein kinase [Arabidopsis thaliana] 75 5e-19
ref|NP_195801.1| serine/threonine protein kinase ATPK10; protein... 82 1e-14
>ref|NP_193194.1| SNF1 like protein kinase; protein id: At4g14580.1, supported by
cDNA: gi_13249502 [Arabidopsis thaliana]
gi|7446364|pir||C71408 probable protein kinase -
Arabidopsis thaliana gi|5302772|emb|CAB46060.1| SNF1
like protein kinase [Arabidopsis thaliana]
gi|7268164|emb|CAB78500.1| SNF1 like protein kinase
[Arabidopsis thaliana] gi|13249503|gb|AAG01367.1|
CBL-interacting protein kinase 4 [Arabidopsis thaliana]
Length = 426
Score = 82.4 bits (202), Expect(2) = 8e-21
Identities = 50/110 (45%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Frame = -2
Query: 801 LDPNPKTRMRLERVLENAWYKKSLR-AEPEESVFESDLYNKWCSCGGEGYKNLGMNAFYI 625
LDPNP+TRM +E V+ W++KSL +E + SVFE D + + E + + AF +
Sbjct: 258 LDPNPETRMSIEAVMGTVWFQKSLEISEFQSSVFELDRFLE-----KEAKSSNAITAFDL 312
Query: 624 ISMSSGLDLRGLFETASSGKREKRFTSEKEVGVVEEKVKEVGVSLGFRVE 475
IS+SSGLDL GLFE ++EKRFT+ V EK +G LGFRVE
Sbjct: 313 ISLSSGLDLSGLFERRK--RKEKRFTARVSAERVVEKAGMIGEKLGFRVE 360
Score = 40.4 bits (93), Expect(2) = 8e-21
Identities = 25/70 (35%), Positives = 41/70 (57%), Gaps = 9/70 (12%)
Frame = -3
Query: 485 LGLRLGRMEP---IGLGKGKVGVVVEVFQIASQLLLVSLKLVDGG------LEFDWTDWE 333
LG R+ + E +GLGKG+ VVVEV + A L++ +K+V G +E W++
Sbjct: 355 LGFRVEKKEETKVVGLGKGRTAVVVEVVEFAEGLVVADVKVVVEGEEEEEEVESHWSELI 414
Query: 332 NGLQDVVLSF 303
L+++VLS+
Sbjct: 415 VELEEIVLSW 424
>ref|NP_188940.1| SNF1 related protein kinase (ATSRPK1); protein id: At3g23000.1,
supported by cDNA: gi_13249112, supported by cDNA:
gi_13448038, supported by cDNA: gi_15451211, supported
by cDNA: gi_5478790, supported by cDNA: gi_9798600
[Arabidopsis thaliana] gi|5478791|dbj|BAA77716.2| SNF1
related protein kinase [Arabidopsis thaliana]
gi|9294189|dbj|BAB02091.1| SNF1 related protein kinase
[Arabidopsis thaliana]
gi|13249113|gb|AAK16682.1|AF290192_1 CBL-interacting
protein kinase 7 [Arabidopsis thaliana]
gi|13448039|gb|AAK26846.1|AF339148_1 SOS2-like protein
kinase PKS7 [Arabidopsis thaliana]
Length = 429
Score = 77.4 bits (189), Expect(2) = 1e-19
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = -2
Query: 801 LDPNPKTRMRLERVLENAWYKKSLR-AEPEESVFESDLYNKWCSCGGEGYKNLGMNAFYI 625
LDPNP TRM +E V++ W+KKSL +E +VF+S++ K + AF +
Sbjct: 261 LDPNPVTRMSIETVMKTNWFKKSLETSEFHRNVFDSEVEMK--------SSVNSITAFDL 312
Query: 624 ISMSSGLDLRGLFETASSGKREKRFTSEKEVGVVEEKVKEVGVSLGFRVE 475
IS+SSGLDL GLFE + K+E+RFT++ VEEK K +G LG+ V+
Sbjct: 313 ISLSSGLDLSGLFE--AKKKKERRFTAKVSGVEVEEKAKMIGEKLGYVVK 360
Score = 41.6 bits (96), Expect(2) = 1e-19
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = -3
Query: 470 GRMEPIGLGKGKVGVVVEVFQIASQLLLVSLKLVDGGLEFD-WTDWENGLQDVVLSF 303
G ++ +GLG+G+ +VVE ++ +++V +K+V+G + W+D L+D+VLS+
Sbjct: 368 GEVKVVGLGRGRTVIVVEAVELTVDVVVVEVKVVEGEEDDSRWSDLITELEDIVLSW 424
>dbj|BAB11738.1| serine/threonine protein kinase [Arabidopsis thaliana]
Length = 429
Score = 77.4 bits (189), Expect(2) = 1e-19
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = -2
Query: 801 LDPNPKTRMRLERVLENAWYKKSLR-AEPEESVFESDLYNKWCSCGGEGYKNLGMNAFYI 625
LDPNP TRM +E V++ W+KKSL +E +VF+S++ K + AF +
Sbjct: 261 LDPNPVTRMSIETVMKTNWFKKSLETSEFHRNVFDSEVEMK--------SSVNSITAFDL 312
Query: 624 ISMSSGLDLRGLFETASSGKREKRFTSEKEVGVVEEKVKEVGVSLGFRVE 475
IS+SSGLDL GLFE + K+E+RFT++ VEEK K +G LG+ V+
Sbjct: 313 ISLSSGLDLSGLFE--AKKKKERRFTAKVSGVEVEEKAKMIGEKLGYVVK 360
Score = 41.6 bits (96), Expect(2) = 1e-19
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = -3
Query: 470 GRMEPIGLGKGKVGVVVEVFQIASQLLLVSLKLVDGGLEFD-WTDWENGLQDVVLSF 303
G ++ +GLG+G+ +VVE ++ +++V +K+V+G + W+D L+D+VLS+
Sbjct: 368 GEVKVVGLGRGRTVIVVEAVELTVDVVVVEVKVVEGEEDDSRWSDLITELEDIVLSW 424
>gb|AAK96877.1| SNF1 related protein kinase [Arabidopsis thaliana]
Length = 429
Score = 75.1 bits (183), Expect(2) = 5e-19
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Frame = -2
Query: 801 LDPNPKTRMRLERVLENAWYKKSLR-AEPEESVFESDLYNKWCSCGGEGYKNLGMNAFYI 625
LDPNP TRM +E V++ W+KKSL +E +VF+S++ K + AF +
Sbjct: 261 LDPNPVTRMSIETVMKTNWFKKSLETSEFHRNVFDSEVEMK--------SSVNSITAFDL 312
Query: 624 ISMSSGLDLRGLFETASSGKREKRFTSEKEVGVVEEKVKEVGVSLGFRVE 475
IS+SSGLDL GLFE + K+E+RF ++ VEEK K +G LG+ V+
Sbjct: 313 ISLSSGLDLSGLFE--AKKKKERRFPAKVSGVEVEEKAKMIGEKLGYVVK 360
Score = 41.6 bits (96), Expect(2) = 5e-19
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = -3
Query: 470 GRMEPIGLGKGKVGVVVEVFQIASQLLLVSLKLVDGGLEFD-WTDWENGLQDVVLSF 303
G ++ +GLG+G+ +VVE ++ +++V +K+V+G + W+D L+D+VLS+
Sbjct: 368 GEVKVVGLGRGRTVIVVEAVELTVDVVVVEVKVVEGEEDDSRWSDLITELEDIVLSW 424
>ref|NP_195801.1| serine/threonine protein kinase ATPK10; protein id: At5g01810.1,
supported by cDNA: gi_13249133, supported by cDNA:
gi_13448030, supported by cDNA: gi_1777311 [Arabidopsis
thaliana] gi|11346417|pir||T48202 protein kinase AK22
(EC 2.7.1.-) - Arabidopsis thaliana
gi|7329654|emb|CAB82751.1| serine/threonine protein
kinase ATPK10 [Arabidopsis thaliana]
Length = 421
Score = 81.6 bits (200), Expect = 1e-14
Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Frame = -2
Query: 801 LDPNPKTRMRLERVLENAWYKKSLRAEPEESVFESDLYNKW----CSCGGEGYKNLGMNA 634
LDPNP TR+ E++++++W++K L+ E +ESV E + S E + + +NA
Sbjct: 247 LDPNPNTRVSTEKIMKSSWFRKGLQEEVKESVEEETEVDAEAEGNASAEKEKKRCINLNA 306
Query: 633 FYIISMSSGLDLRGLFETASSGKREKRFTSEKEVGVVEEKVKEVGVSLGFRV 478
F IIS+S+G DL GLFE K E RFTS +E + EK+ E+G L +V
Sbjct: 307 FEIISLSTGFDLSGLFEKGEE-KEEMRFTSNREASEITEKLVEIGKDLKMKV 357
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 823,038,038
Number of Sequences: 1393205
Number of extensions: 22397107
Number of successful extensions: 176586
Number of sequences better than 10.0: 1699
Number of HSP's better than 10.0 without gapping: 93610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146110
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40616159090
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
