Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002167A_C01 KMC002167A_c01
(563 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||JQ2252 peroxidase (EC 1.11.1.7), cationic - adzuki bean gi|... 166 2e-40
gb|AAB02926.1| peroxidase [Linum usitatissimum] 150 1e-35
pir||T09163 probable peroxidase (EC 1.11.1.7) (clone PC42) - spi... 144 8e-34
gb|AAK52084.1| peroxidase [Nicotiana tabacum] 144 1e-33
emb|CAA66962.1| peroxidase [Arabidopsis thaliana] 134 1e-30
>pir||JQ2252 peroxidase (EC 1.11.1.7), cationic - adzuki bean
gi|218328|dbj|BAA01950.1| peroxidase [Vigna angularis]
Length = 357
Score = 166 bits (419), Expect = 2e-40
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = -3
Query: 561 SPNTFDNKYYVDLMNRQGLFFSDQDLYTDKRTKDIVTSFAVNQSLFFEKFVVAMLKMGQL 382
SPNTFDNKYYVDLMNRQGLF SDQDLYTDKRT+ IVTSFAVNQSLFFEKFV AMLKMGQL
Sbjct: 259 SPNTFDNKYYVDLMNRQGLFTSDQDLYTDKRTRGIVTSFAVNQSLFFEKFVFAMLKMGQL 318
Query: 381 NVLTGSQGEIRANCSVRNADKKKSFLTTVVEEVVEELIEM 262
+VLTG+QGEIRANCSVRNA+ K+FL++VVE V +E IEM
Sbjct: 319 SVLTGNQGEIRANCSVRNAN-SKAFLSSVVENVAQEFIEM 357
>gb|AAB02926.1| peroxidase [Linum usitatissimum]
Length = 355
Score = 150 bits (378), Expect = 1e-35
Identities = 77/102 (75%), Positives = 84/102 (81%), Gaps = 2/102 (1%)
Frame = -3
Query: 561 SPNTFDNKYYVDLMNRQGLFFSDQDLYTDKRTKDIVTSFAVNQSLFFEKFVVAMLKMGQL 382
SPN FDNKYYVDLMNRQGLF SDQDLYTD RT+ IVTSFA+NQ+LFFEKFVVAM+KMGQ+
Sbjct: 253 SPNVFDNKYYVDLMNRQGLFTSDQDLYTDSRTRGIVTSFAINQTLFFEKFVVAMIKMGQI 312
Query: 381 NVLTGSQGEIRANCSVRNADK--KKSFLTTVVEEVVEELIEM 262
+VLTG QGEIRANCSV N+ K SFL VEE VE L M
Sbjct: 313 SVLTGKQGEIRANCSVTNSAKVQTSSFLEEAVEEAVELLAGM 354
>pir||T09163 probable peroxidase (EC 1.11.1.7) (clone PC42) - spinach
gi|1781326|emb|CAA71490.1| peroxidase [Spinacia
oleracea]
Length = 351
Score = 144 bits (363), Expect = 8e-34
Identities = 71/91 (78%), Positives = 81/91 (88%)
Frame = -3
Query: 561 SPNTFDNKYYVDLMNRQGLFFSDQDLYTDKRTKDIVTSFAVNQSLFFEKFVVAMLKMGQL 382
+PN FDNKYY+DLMNRQGLF SDQDLYTD RTKDIVTSFA+NQ+LFF+KF+ AM+KMGQL
Sbjct: 251 TPNVFDNKYYIDLMNRQGLFTSDQDLYTDSRTKDIVTSFALNQNLFFQKFIDAMVKMGQL 310
Query: 381 NVLTGSQGEIRANCSVRNADKKKSFLTTVVE 289
NVLTG+QGEIRANCSVRNA+ L +VVE
Sbjct: 311 NVLTGTQGEIRANCSVRNAN-SNLHLKSVVE 340
>gb|AAK52084.1| peroxidase [Nicotiana tabacum]
Length = 354
Score = 144 bits (362), Expect = 1e-33
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = -3
Query: 561 SPNTFDNKYYVDLMNRQGLFFSDQDLYTDKRTKDIVTSFAVNQSLFFEKFVVAMLKMGQL 382
SPN FDNKYYVDLMNRQGLF SDQDLYTD+RT+ IVTSFA+N+SLFFE+FV +M+KMGQL
Sbjct: 254 SPNKFDNKYYVDLMNRQGLFTSDQDLYTDRRTRGIVTSFAINESLFFEEFVNSMIKMGQL 313
Query: 381 NVLTGSQGEIRANCSVRNADKKKSFLTTVVEE 286
NVLTG+QGEIRANCSVRN+ L+T V E
Sbjct: 314 NVLTGTQGEIRANCSVRNSANYNLLLSTSVAE 345
>emb|CAA66962.1| peroxidase [Arabidopsis thaliana]
Length = 358
Score = 134 bits (336), Expect = 1e-30
Identities = 67/100 (67%), Positives = 83/100 (83%)
Frame = -3
Query: 561 SPNTFDNKYYVDLMNRQGLFFSDQDLYTDKRTKDIVTSFAVNQSLFFEKFVVAMLKMGQL 382
SP+ FDNKYYVDLMNRQGLF SDQDL+ DKRT+ IV SFA++Q LFF+ F VAM+KMGQ+
Sbjct: 262 SPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQM 321
Query: 381 NVLTGSQGEIRANCSVRNADKKKSFLTTVVEEVVEELIEM 262
+VLTG+QGEIR+NCS RN +SF+ +V+EE +EE I M
Sbjct: 322 SVLTGTQGEIRSNCSARNT---QSFM-SVLEEGIEEAISM 357
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 472,892,728
Number of Sequences: 1393205
Number of extensions: 10217193
Number of successful extensions: 34412
Number of sequences better than 10.0: 452
Number of HSP's better than 10.0 without gapping: 31611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34026
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
