Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002144A_C01 KMC002144A_c01
(747 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus] 204 1e-51
ref|NP_187317.1| ATP citrate lyase, putative; protein id: At3g06... 197 1e-49
dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japoni... 197 2e-49
ref|NP_199757.1| ATP citrate lyase; protein id: At5g49460.1, sup... 196 3e-49
gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum] 191 1e-47
>emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus]
Length = 608
Score = 204 bits (518), Expect = 1e-51
Identities = 102/106 (96%), Positives = 103/106 (96%)
Frame = -3
Query: 745 NKDKRVELLQKFARTHFPSVKYMEYAVQVETYTLPKANNLVLNVDGAIGSLFLDLLAGSG 566
NKDKRVELLQKFARTHFPSVKYMEYAV+VETYTL KANNLVLNVDGAIGSLFLDLLAGSG
Sbjct: 495 NKDKRVELLQKFARTHFPSVKYMEYAVEVETYTLTKANNLVLNVDGAIGSLFLDLLAGSG 554
Query: 565 MFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTLDLKRLKQPLYRHP 428
MFTKQEIDEIVEIGYLNGLFVLARSIGLIGHT D KRLKQPLYRHP
Sbjct: 555 MFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
>ref|NP_187317.1| ATP citrate lyase, putative; protein id: At3g06650.1, supported by
cDNA: gi_15292848 [Arabidopsis thaliana]
gi|12321918|gb|AAG50997.1|AC036106_10 ATP citrate lyase,
putative; 38389-41775 [Arabidopsis thaliana]
gi|12322674|gb|AAG51326.1|AC020580_6 ATP citrate lyase,
putative; 3734-7120 [Arabidopsis thaliana]
gi|27754223|gb|AAO22565.1| putative ATP citrate lyase
[Arabidopsis thaliana]
Length = 608
Score = 197 bits (501), Expect = 1e-49
Identities = 98/106 (92%), Positives = 103/106 (96%)
Frame = -3
Query: 745 NKDKRVELLQKFARTHFPSVKYMEYAVQVETYTLPKANNLVLNVDGAIGSLFLDLLAGSG 566
N+DKRVELLQKFAR++FP+VKYMEYAVQVETYTL KANNLVLNVDGAIGSLFLDLLAGSG
Sbjct: 495 NRDKRVELLQKFARSNFPAVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSG 554
Query: 565 MFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTLDLKRLKQPLYRHP 428
MFTKQEIDEIV+IGYLNGLFVLARSIGLIGHT D KRLKQPLYRHP
Sbjct: 555 MFTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
>dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japonica cultivar-group)]
gi|15623805|dbj|BAB67865.1| putative ATP citrate lyase
[Oryza sativa (japonica cultivar-group)]
Length = 608
Score = 197 bits (500), Expect = 2e-49
Identities = 97/106 (91%), Positives = 102/106 (95%)
Frame = -3
Query: 745 NKDKRVELLQKFARTHFPSVKYMEYAVQVETYTLPKANNLVLNVDGAIGSLFLDLLAGSG 566
N+DKRV+LLQK+A THFPSVKYMEYAVQVETYTL KANNLVLNVDGAIGSLFLDLL+GSG
Sbjct: 495 NRDKRVQLLQKYAHTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLSGSG 554
Query: 565 MFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTLDLKRLKQPLYRHP 428
MF+KQEIDEIVEIGYLNGLFVLARSIGLIGHT D KRLKQPLYRHP
Sbjct: 555 MFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
>ref|NP_199757.1| ATP citrate lyase; protein id: At5g49460.1, supported by cDNA:
gi_14334787, supported by cDNA: gi_16648643, supported
by cDNA: gi_17065615 [Arabidopsis thaliana]
gi|9759429|dbj|BAB09916.1| ATP citrate lyase
[Arabidopsis thaliana] gi|14334788|gb|AAK59572.1|
putative ATP citrate lyase [Arabidopsis thaliana]
gi|16648644|gb|AAL25638.1| ATP-citrate lyase subunit B
[Arabidopsis thaliana] gi|17065616|gb|AAL33788.1|
putative ATP citrate lyase [Arabidopsis thaliana]
Length = 608
Score = 196 bits (498), Expect = 3e-49
Identities = 98/106 (92%), Positives = 102/106 (95%)
Frame = -3
Query: 745 NKDKRVELLQKFARTHFPSVKYMEYAVQVETYTLPKANNLVLNVDGAIGSLFLDLLAGSG 566
N+DKRVELLQKFAR++FPSVKYMEYAV VETYTL KANNLVLNVDGAIGSLFLDLLAGSG
Sbjct: 495 NRDKRVELLQKFARSNFPSVKYMEYAVTVETYTLSKANNLVLNVDGAIGSLFLDLLAGSG 554
Query: 565 MFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTLDLKRLKQPLYRHP 428
MFTKQEIDEIV+IGYLNGLFVLARSIGLIGHT D KRLKQPLYRHP
Sbjct: 555 MFTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
>gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum]
Length = 608
Score = 191 bits (484), Expect = 1e-47
Identities = 95/106 (89%), Positives = 100/106 (93%)
Frame = -3
Query: 745 NKDKRVELLQKFARTHFPSVKYMEYAVQVETYTLPKANNLVLNVDGAIGSLFLDLLAGSG 566
N+DKRVE+LQ +AR +FPSVKYMEYAVQVETYTL KANNLVLNVDGAIG+LFLDLLAGSG
Sbjct: 495 NRDKRVEILQLYARDNFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGTLFLDLLAGSG 554
Query: 565 MFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTLDLKRLKQPLYRHP 428
MFTK EIDEIVEIGYLNGLFVLARSIGLIGHT D KRLKQPLYRHP
Sbjct: 555 MFTKPEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 657,892,317
Number of Sequences: 1393205
Number of extensions: 14743226
Number of successful extensions: 33957
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 32875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33948
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36032594816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
