Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002115A_C01 KMC002115A_c01
(589 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG17942.1| putative pyridoxine biosynthetic enzyme [Phaseolu... 143 2e-33
pir||S71492 ethylene-responsive protein 2 - Para rubber tree (fr... 142 4e-33
sp|Q39963|ER1_HEVBR ETHYLENE-INDUCIBLE PROTEIN HEVER gi|2129913|... 141 5e-33
ref|NP_195761.1| pyridoxine biosynthesis protein - like; protein... 139 3e-32
gb|AAM66972.1| pyridoxine biosynthesis protein-like [Arabidopsis... 139 3e-32
>gb|AAG17942.1| putative pyridoxine biosynthetic enzyme [Phaseolus vulgaris]
Length = 312
Score = 143 bits (360), Expect = 2e-33
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -2
Query: 588 ADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGL 409
ADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDP +LAE+SCGLGEAMVG+
Sbjct: 238 ADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGI 297
Query: 408 NLNDSNVERFANRSE 364
NL+D+NVERFANRSE
Sbjct: 298 NLSDTNVERFANRSE 312
>pir||S71492 ethylene-responsive protein 2 - Para rubber tree (fragment)
Length = 190
Score = 142 bits (357), Expect = 4e-33
Identities = 68/75 (90%), Positives = 72/75 (95%)
Frame = -2
Query: 588 ADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGL 409
ADAALMMQLGCDGVFVGSGVFKSGDPA+RARAIVQAVTHYSDP +LAE+SCGLGEAMVG+
Sbjct: 116 ADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPNMLAEVSCGLGEAMVGI 175
Query: 408 NLNDSNVERFANRSE 364
NLND VERFANRSE
Sbjct: 176 NLNDKKVERFANRSE 190
>sp|Q39963|ER1_HEVBR ETHYLENE-INDUCIBLE PROTEIN HEVER gi|2129913|pir||S60047
ethylene-responsive protein 1 - Para rubber tree
gi|1209317|gb|AAA91063.1| ethylene-inducible protein
Length = 309
Score = 141 bits (356), Expect = 5e-33
Identities = 68/75 (90%), Positives = 72/75 (95%)
Frame = -2
Query: 588 ADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGL 409
ADAALMMQLGCDGVFVGSGVFKSGDPA+RARAIVQAVTHYSDP +LAE+SCGLGEAMVG+
Sbjct: 235 ADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEAMVGI 294
Query: 408 NLNDSNVERFANRSE 364
NLND VERFANRSE
Sbjct: 295 NLNDKKVERFANRSE 309
>ref|NP_195761.1| pyridoxine biosynthesis protein - like; protein id: At5g01410.1,
supported by cDNA: 8877., supported by cDNA:
gi_16226308, supported by cDNA: gi_17933286, supported
by cDNA: gi_20453410 [Arabidopsis thaliana]
gi|11358736|pir||T48163 pyridoxine biosynthesis
protein-like - Arabidopsis thaliana
gi|7320719|emb|CAB81924.1| pyridoxine biosynthesis
protein-like [Arabidopsis thaliana]
gi|16226309|gb|AAL16130.1|AF428298_1 AT5g01410/T10O8_120
[Arabidopsis thaliana]
gi|17933287|gb|AAL48227.1|AF446352_1 AT5g01410/T10O8_120
[Arabidopsis thaliana] gi|20453411|gb|AAM19944.1|
AT5g01410/T10O8_120 [Arabidopsis thaliana]
Length = 309
Score = 139 bits (350), Expect = 3e-32
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -2
Query: 588 ADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGL 409
ADAALMMQLGCDGVFVGSG+FKSGDPA+RARAIVQAVTHYSDP +L E+SCGLGEAMVG+
Sbjct: 235 ADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGI 294
Query: 408 NLNDSNVERFANRSE 364
NLND VERFANRSE
Sbjct: 295 NLNDEKVERFANRSE 309
>gb|AAM66972.1| pyridoxine biosynthesis protein-like [Arabidopsis thaliana]
Length = 309
Score = 139 bits (350), Expect = 3e-32
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -2
Query: 588 ADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGL 409
ADAALMMQLGCDGVFVGSG+FKSGDPA+RARAIVQAVTHYSDP +L E+SCGLGEAMVG+
Sbjct: 235 ADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGI 294
Query: 408 NLNDSNVERFANRSE 364
NLND VERFANRSE
Sbjct: 295 NLNDEKVERFANRSE 309
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,293,672
Number of Sequences: 1393205
Number of extensions: 11298227
Number of successful extensions: 33644
Number of sequences better than 10.0: 166
Number of HSP's better than 10.0 without gapping: 31048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33452
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
