Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002114A_C03 KMC002114A_c03
(604 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q43317|CYSK_CITLA Cysteine synthase (O-acetylserine sulfhydry... 211 4e-54
sp|P80608|CYSK_MAIZE Cysteine synthase (O-acetylserine sulfhydry... 206 1e-52
sp|Q9XEA8|CYK2_ORYSA Cysteine synthase (O-acetylserine sulfhydry... 206 2e-52
sp|O81154|CYSK_SOLTU Cysteine synthase (O-acetylserine sulfhydry... 205 4e-52
dbj|BAB20861.1| cytosolic cysteine synthase [Solanum tuberosum] 205 4e-52
>sp|Q43317|CYSK_CITLA Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase) (OAS-TL) gi|1071911|pir||S46438
cysteine synthase (EC 4.2.99.8) - watermelon
gi|540497|dbj|BAA05965.1| cysteine synthase [Citrullus
lanatus]
Length = 325
Score = 211 bits (538), Expect = 4e-54
Identities = 105/122 (86%), Positives = 117/122 (95%)
Frame = -2
Query: 603 KLYGVEPSESAILSGGKPGPHKIQGIGAGFIPGILDVDILDEVVQVSSEEAVETAKLLAL 424
KLYGVEP ESAILSGGKPGPHKIQGIGAGFIPG+LDV++LDEV+QVSSEE++ETAKLLAL
Sbjct: 204 KLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLDVNLLDEVIQVSSEESIETAKLLAL 263
Query: 423 KEGLLVGISSGAAAAAAIKLARRPENDGKLIVVVFPSFGERYLSSVLFEATKREAESMVF 244
KEGLLVGISSGAAAAAAI++A+RPEN GKLIV VFPSFGERYLS+VLFE+ KRE E+MVF
Sbjct: 264 KEGLLVGISSGAAAAAAIRIAKRPENAGKLIVAVFPSFGERYLSTVLFESVKRETENMVF 323
Query: 243 EP 238
EP
Sbjct: 324 EP 325
>sp|P80608|CYSK_MAIZE Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase) (OAS-TL) gi|1076798|pir||S52738
cysteine synthase (EC 4.2.99.8) precursor - maize
gi|758353|emb|CAA59798.1| O-acetylserine (thiol) lyase;
cysteine synthase [Zea mays]
Length = 325
Score = 206 bits (525), Expect = 1e-52
Identities = 102/122 (83%), Positives = 115/122 (93%)
Frame = -2
Query: 603 KLYGVEPSESAILSGGKPGPHKIQGIGAGFIPGILDVDILDEVVQVSSEEAVETAKLLAL 424
KLYGVEP ESA+L+GGKPGPHKIQGIGAGFIPG+LDVD+LDE +QVSS+EA+ETAK LAL
Sbjct: 204 KLYGVEPVESAVLNGGKPGPHKIQGIGAGFIPGVLDVDLLDETLQVSSDEAIETAKALAL 263
Query: 423 KEGLLVGISSGAAAAAAIKLARRPENDGKLIVVVFPSFGERYLSSVLFEATKREAESMVF 244
KEGLLVGISSGAAAAAA++LA+RPEN GKL VVVFPSFGERYLSSVLF++ K+EAESMV
Sbjct: 264 KEGLLVGISSGAAAAAAVRLAKRPENAGKLFVVVFPSFGERYLSSVLFQSIKKEAESMVV 323
Query: 243 EP 238
EP
Sbjct: 324 EP 325
>sp|Q9XEA8|CYK2_ORYSA Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase) (OAS-TL)
gi|4574139|gb|AAD23909.1|AF073697_1 cysteine synthase
[Oryza sativa] gi|14626273|gb|AAK71541.1|AC087852_1
cysteine synthase [Oryza sativa (japonica
cultivar-group)]
Length = 325
Score = 206 bits (523), Expect = 2e-52
Identities = 101/122 (82%), Positives = 116/122 (94%)
Frame = -2
Query: 603 KLYGVEPSESAILSGGKPGPHKIQGIGAGFIPGILDVDILDEVVQVSSEEAVETAKLLAL 424
K+YGVEP+ESAILSGG+PGPHKIQGIGAGF+PG+LDV++LDEVVQVSS+EA+ AK LAL
Sbjct: 204 KIYGVEPTESAILSGGRPGPHKIQGIGAGFVPGVLDVNLLDEVVQVSSDEAISMAKQLAL 263
Query: 423 KEGLLVGISSGAAAAAAIKLARRPENDGKLIVVVFPSFGERYLSSVLFEATKREAESMVF 244
KEGLLVGISSGAAA AAI++A+RPEN GKL+VVVFPSFGERYLSSVLFE+ KREAE+MVF
Sbjct: 264 KEGLLVGISSGAAAVAAIRVAQRPENKGKLVVVVFPSFGERYLSSVLFESIKREAENMVF 323
Query: 243 EP 238
EP
Sbjct: 324 EP 325
>sp|O81154|CYSK_SOLTU Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A)
gi|7436946|pir||T07001 cysteine synthase (EC 4.2.99.8),
cytosolic - potato gi|3290020|gb|AAC25635.1| cysteine
synthase; CS-A; O-acetylserine (thiol) lyase; cytosolic
isoform [Solanum tuberosum]
Length = 325
Score = 205 bits (521), Expect = 4e-52
Identities = 102/122 (83%), Positives = 115/122 (93%)
Frame = -2
Query: 603 KLYGVEPSESAILSGGKPGPHKIQGIGAGFIPGILDVDILDEVVQVSSEEAVETAKLLAL 424
KLYGVEP ESAILSGGKPGPHKIQGIGAGFIPG+L+V+++D+VVQVSSEE++E AKLLAL
Sbjct: 204 KLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLEVNLIDDVVQVSSEESIEMAKLLAL 263
Query: 423 KEGLLVGISSGAAAAAAIKLARRPENDGKLIVVVFPSFGERYLSSVLFEATKREAESMVF 244
KEGLLVGISSGAAAAAAIK+A+RPEN GKLIVV+FPSFGERYLSSVLFE +REAE+M
Sbjct: 264 KEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSFGERYLSSVLFETVRREAENMTV 323
Query: 243 EP 238
EP
Sbjct: 324 EP 325
>dbj|BAB20861.1| cytosolic cysteine synthase [Solanum tuberosum]
Length = 325
Score = 205 bits (521), Expect = 4e-52
Identities = 102/122 (83%), Positives = 115/122 (93%)
Frame = -2
Query: 603 KLYGVEPSESAILSGGKPGPHKIQGIGAGFIPGILDVDILDEVVQVSSEEAVETAKLLAL 424
KLYGVEP ESAILSGGKPGPHKIQGIGAGFIPG+L+V+++D+VVQVSSEE++E AKLLAL
Sbjct: 204 KLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLEVNLIDDVVQVSSEESIEMAKLLAL 263
Query: 423 KEGLLVGISSGAAAAAAIKLARRPENDGKLIVVVFPSFGERYLSSVLFEATKREAESMVF 244
KEGLLVGISSGAAAAAAIK+A+RPEN GKLIVV+FPSFGERYLSSVLFE +REAE+M
Sbjct: 264 KEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSFGERYLSSVLFETVRREAENMTV 323
Query: 243 EP 238
EP
Sbjct: 324 EP 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 482,531,867
Number of Sequences: 1393205
Number of extensions: 9841067
Number of successful extensions: 32166
Number of sequences better than 10.0: 494
Number of HSP's better than 10.0 without gapping: 30474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31897
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
