Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002107A_C08 KMC002107A_c08
(1392 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK54610.1|AF374475_1 hypersensitive-induced response protein... 435 e-128
gb|AAN17462.1| hypersensitive-induced reaction protein 1 [Hordeu... 432 e-128
gb|AAF68389.1|AF236373_1 hypersensitive-induced response protein... 435 e-128
ref|NP_177142.1| unknown protein; protein id: At1g69840.1, suppo... 427 e-127
gb|AAF68390.1|AF236374_1 hypersensitive-induced response protein... 428 e-127
>gb|AAK54610.1|AF374475_1 hypersensitive-induced response protein [Oryza sativa]
Length = 284
Score = 435 bits (1119), Expect(2) = e-128
Identities = 221/259 (85%), Positives = 240/259 (92%)
Frame = -2
Query: 1346 MGQTLGCVQVDQSSVAIKEVFGKYDDVLQPGCHCVPWCIGSQISGSLSLRVKQLDVRCET 1167
MGQ LG VQVDQS+VAIKE FGK+D+VL+PGCH +PWCIG QI+G LSLRV+QLDVRCET
Sbjct: 1 MGQALGLVQVDQSTVAIKESFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCET 60
Query: 1166 KTKDNVFVTVVASIQYRALADKAVDAYYKLSDTKAQIQAYVFDVIRASVPKMELDSAFEQ 987
KTKDNVFV VVAS+QYRALA+KA DA+Y+LS+T+ QIQ+YVFDVIRASVPKM LD AFEQ
Sbjct: 61 KTKDNVFVNVVASVQYRALAEKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 986 KNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDERVKKAMNEINAAARLRVATKEKAEA 807
KNEIAKAVE+ELEKAMS YGYEIVQTLIVDIEPDE VK+AMNEINAAARLRVA EKAEA
Sbjct: 121 KNEIAKAVEDELEKAMSTYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEA 180
Query: 806 EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDIMDMVLVT 627
EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTS+KD+MDMVLVT
Sbjct: 181 EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSAKDVMDMVLVT 240
Query: 626 QYFDTMKEIGASAKIQCCF 570
QYFDTMKEIGAS+K F
Sbjct: 241 QYFDTMKEIGASSKSSSVF 259
Score = 48.5 bits (114), Expect(2) = e-128
Identities = 22/29 (75%), Positives = 25/29 (85%)
Frame = -3
Query: 586 KSNAVFIPHGPGAVKDITSQIRDGLLPRK 500
KS++VFIPHGPGAVKDI +QIRDG L K
Sbjct: 254 KSSSVFIPHGPGAVKDIAAQIRDGQLQAK 282
>gb|AAN17462.1| hypersensitive-induced reaction protein 1 [Hordeum vulgare subsp.
vulgare] gi|23345052|gb|AAN17457.1|
hypersensitive-induced reaction protein 1 [Hordeum
vulgare]
Length = 284
Score = 432 bits (1110), Expect(2) = e-128
Identities = 214/259 (82%), Positives = 239/259 (91%)
Frame = -2
Query: 1346 MGQTLGCVQVDQSSVAIKEVFGKYDDVLQPGCHCVPWCIGSQISGSLSLRVKQLDVRCET 1167
MG LG +Q+DQS+VAIKE FGK+D +LQPGCHC+PWC+G Q++G LSLRV+QLDVRCET
Sbjct: 1 MGGVLGLIQIDQSTVAIKETFGKFDAILQPGCHCLPWCLGQQVAGYLSLRVQQLDVRCET 60
Query: 1166 KTKDNVFVTVVASIQYRALADKAVDAYYKLSDTKAQIQAYVFDVIRASVPKMELDSAFEQ 987
KTKDNVFV VVAS+QYRALADKA DA+Y+LS+T+ QIQ+YVFDVIRASVPKM LD FEQ
Sbjct: 61 KTKDNVFVNVVASVQYRALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDVFEQ 120
Query: 986 KNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDERVKKAMNEINAAARLRVATKEKAEA 807
KNEIA+AVEEELEKAMSAYGYEIVQTLIVDIEPDE VK+AMNEINAAAR+R+A EKAEA
Sbjct: 121 KNEIARAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAATEKAEA 180
Query: 806 EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDIMDMVLVT 627
EKILQIKRAEG+AESKYLAG+GIARQRQAIVDGLRDSVLAFSENVPGTSSKD+MDMVLVT
Sbjct: 181 EKILQIKRAEGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVT 240
Query: 626 QYFDTMKEIGASAKIQCCF 570
QYFDTMK+IGAS+K F
Sbjct: 241 QYFDTMKDIGASSKSSAVF 259
Score = 49.7 bits (117), Expect(2) = e-128
Identities = 23/26 (88%), Positives = 24/26 (91%)
Frame = -3
Query: 586 KSNAVFIPHGPGAVKDITSQIRDGLL 509
KS+AVFIPHGPGAVKDI SQIRDG L
Sbjct: 254 KSSAVFIPHGPGAVKDIASQIRDGQL 279
>gb|AAF68389.1|AF236373_1 hypersensitive-induced response protein [Zea mays]
Length = 284
Score = 435 bits (1118), Expect(2) = e-128
Identities = 220/259 (84%), Positives = 239/259 (91%)
Frame = -2
Query: 1346 MGQTLGCVQVDQSSVAIKEVFGKYDDVLQPGCHCVPWCIGSQISGSLSLRVKQLDVRCET 1167
MGQ LG +QVDQS+VAIKE FGK+D+VL+PGCH +PWCIG QI+G LSLRV+QLDVRCET
Sbjct: 1 MGQALGLIQVDQSTVAIKETFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCET 60
Query: 1166 KTKDNVFVTVVASIQYRALADKAVDAYYKLSDTKAQIQAYVFDVIRASVPKMELDSAFEQ 987
KTKDNVFV VVAS+QYRALADKA DA+Y+LS+T+ QIQ+YVFDVIRASVPKM LD AFEQ
Sbjct: 61 KTKDNVFVNVVASVQYRALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 986 KNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDERVKKAMNEINAAARLRVATKEKAEA 807
KNEIAKAVE ELEKAMS YGYEIVQTLIVDIEPDE VK+AMNEINAAARLR+A EKAEA
Sbjct: 121 KNEIAKAVENELEKAMSMYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRLAASEKAEA 180
Query: 806 EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDIMDMVLVT 627
EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTS+KD+MDMVLVT
Sbjct: 181 EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSAKDVMDMVLVT 240
Query: 626 QYFDTMKEIGASAKIQCCF 570
QYFDTMKEIGAS+K F
Sbjct: 241 QYFDTMKEIGASSKSSSVF 259
Score = 46.2 bits (108), Expect(2) = e-128
Identities = 20/26 (76%), Positives = 24/26 (91%)
Frame = -3
Query: 586 KSNAVFIPHGPGAVKDITSQIRDGLL 509
KS++VFIPHGPGAV+DI +QIRDG L
Sbjct: 254 KSSSVFIPHGPGAVRDIAAQIRDGQL 279
>ref|NP_177142.1| unknown protein; protein id: At1g69840.1, supported by cDNA:
gi_20466747 [Arabidopsis thaliana]
gi|25404843|pir||F96720 unknown protein, 58197-59415
[imported] - Arabidopsis thaliana
gi|12325226|gb|AAG52556.1|AC010675_4 unknown protein;
58197-59415 [Arabidopsis thaliana]
gi|20466748|gb|AAM20691.1| unknown protein [Arabidopsis
thaliana] gi|23198256|gb|AAN15655.1| unknown protein
[Arabidopsis thaliana]
Length = 286
Score = 427 bits (1099), Expect(2) = e-127
Identities = 212/259 (81%), Positives = 240/259 (91%)
Frame = -2
Query: 1346 MGQTLGCVQVDQSSVAIKEVFGKYDDVLQPGCHCVPWCIGSQISGSLSLRVKQLDVRCET 1167
MGQ LGC+QVDQS+VAIKE FGK+D+VL+PGCHC+PWC+GSQ++G LSLRV+QLDVRCET
Sbjct: 1 MGQALGCIQVDQSNVAIKETFGKFDEVLEPGCHCLPWCLGSQVAGHLSLRVQQLDVRCET 60
Query: 1166 KTKDNVFVTVVASIQYRALADKAVDAYYKLSDTKAQIQAYVFDVIRASVPKMELDSAFEQ 987
KTKDNVFVTVVASIQYRALA+ A DA+YKLS+T+ QIQAYVFDVIRASVPK++LDS FEQ
Sbjct: 61 KTKDNVFVTVVASIQYRALAESAQDAFYKLSNTRNQIQAYVFDVIRASVPKLDLDSTFEQ 120
Query: 986 KNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDERVKKAMNEINAAARLRVATKEKAEA 807
KN+IAK VE ELEKAMS YGYEIVQTLIVDIEPD VK+AMNEINAA+R+R A EKAEA
Sbjct: 121 KNDIAKTVETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAASEKAEA 180
Query: 806 EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDIMDMVLVT 627
EKILQIKRAEG+AESKYL+G+GIARQRQAIVDGLR+SVLAFSE+VPGTSSKD+MDMVLVT
Sbjct: 181 EKILQIKRAEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVT 240
Query: 626 QYFDTMKEIGASAKIQCCF 570
QYFDT+KEIGAS+K F
Sbjct: 241 QYFDTLKEIGASSKSNSVF 259
Score = 51.6 bits (122), Expect(2) = e-127
Identities = 23/26 (88%), Positives = 25/26 (95%)
Frame = -3
Query: 586 KSNAVFIPHGPGAVKDITSQIRDGLL 509
KSN+VFIPHGPGAV+DI SQIRDGLL
Sbjct: 254 KSNSVFIPHGPGAVRDIASQIRDGLL 279
>gb|AAF68390.1|AF236374_1 hypersensitive-induced response protein [Zea mays]
Length = 284
Score = 428 bits (1101), Expect(2) = e-127
Identities = 216/259 (83%), Positives = 241/259 (92%)
Frame = -2
Query: 1346 MGQTLGCVQVDQSSVAIKEVFGKYDDVLQPGCHCVPWCIGSQISGSLSLRVKQLDVRCET 1167
MGQ LG VQVDQS+VAIKE FGK+ +VL+PGCH +PWCIG QI+G LSLRV+QLDVRCET
Sbjct: 1 MGQILGLVQVDQSTVAIKENFGKFSEVLEPGCHFLPWCIGQQIAGYLSLRVRQLDVRCET 60
Query: 1166 KTKDNVFVTVVASIQYRALADKAVDAYYKLSDTKAQIQAYVFDVIRASVPKMELDSAFEQ 987
KTKDNVFVTVVAS+QYRALADKA DA+YKLS+T+ QIQ+YVFDVIRA+VPK+ LD AFEQ
Sbjct: 61 KTKDNVFVTVVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLGLDDAFEQ 120
Query: 986 KNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDERVKKAMNEINAAARLRVATKEKAEA 807
KNEIAKAVEEELEKAMS YGY+IVQTLIVDIEPD+RVK+AMNEINAAAR+RVA EKAEA
Sbjct: 121 KNEIAKAVEEELEKAMSTYGYQIVQTLIVDIEPDDRVKRAMNEINAAARMRVAASEKAEA 180
Query: 806 EKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDIMDMVLVT 627
EKILQIK+AEG+AESKYLAG+GIARQRQAIVDGLRDSVLAFSENVPGT++KDIMDMVLVT
Sbjct: 181 EKILQIKKAEGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVT 240
Query: 626 QYFDTMKEIGASAKIQCCF 570
QYFDTM+EIGAS+K F
Sbjct: 241 QYFDTMREIGASSKSSSVF 259
Score = 49.7 bits (117), Expect(2) = e-127
Identities = 21/26 (80%), Positives = 26/26 (99%)
Frame = -3
Query: 586 KSNAVFIPHGPGAVKDITSQIRDGLL 509
KS++VFIPHGPGAVKD+++QIRDGLL
Sbjct: 254 KSSSVFIPHGPGAVKDVSAQIRDGLL 279
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,204,165,516
Number of Sequences: 1393205
Number of extensions: 27553277
Number of successful extensions: 72911
Number of sequences better than 10.0: 285
Number of HSP's better than 10.0 without gapping: 67585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72629
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 91308743232
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
