Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002081A_C01 KMC002081A_c01
(633 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175454.1| serine/threonine protein phosphatase; protein i... 214 2e-56
gb|AAM21172.1|AF305635_1 serine/threonine protein phosphatase 2A... 213 3e-56
pir||T17012 phosphoprotein phosphatase (EC 3.1.3.16) - apple tre... 212 6e-56
ref|NP_188632.1| protein phosphatase; protein id: At3g19980.1, s... 211 1e-55
dbj|BAB84606.1| putative Ser/Thr protein phosphatase [Oryza sati... 210 3e-55
>ref|NP_175454.1| serine/threonine protein phosphatase; protein id: At1g50370.1,
supported by cDNA: 35230., supported by cDNA:
gi_16226939 [Arabidopsis thaliana]
gi|25752349|pir||H96539 phosphoprotein phosphatase (EC
3.1.3.16) F14I3.5 [similarity] - Arabidopsis thaliana
gi|5734785|gb|AAD50050.1|AC007980_15 phosphoprotein
phosphatase [Arabidopsis thaliana]
gi|16226940|gb|AAL16304.1|AF428374_1 At1g50370/F14I3_10
[Arabidopsis thaliana] gi|21593021|gb|AAM64970.1|
phosphoprotein phosphatase [Arabidopsis thaliana]
Length = 303
Score = 214 bits (544), Expect(2) = 2e-56
Identities = 97/101 (96%), Positives = 99/101 (97%)
Frame = -3
Query: 631 GPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF 452
GPFCDLMWSDPE+IETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF
Sbjct: 186 GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF 245
Query: 451 PDKGLVTVWSAPNYCYRCGNVASIFSFNENMEREVKFFTET 329
DKGLVTVWSAPNYCYRCGNVASI SFN+NMEREVKFFTET
Sbjct: 246 QDKGLVTVWSAPNYCYRCGNVASILSFNDNMEREVKFFTET 286
Score = 27.3 bits (59), Expect(2) = 2e-56
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = -2
Query: 341 FHRDHEENNQMRGPR 297
F + EENNQMRGPR
Sbjct: 282 FFTETEENNQMRGPR 296
>gb|AAM21172.1|AF305635_1 serine/threonine protein phosphatase 2A [Pisum sativum]
Length = 303
Score = 213 bits (543), Expect(2) = 3e-56
Identities = 97/101 (96%), Positives = 99/101 (97%)
Frame = -3
Query: 631 GPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF 452
GPFCDLMWSDPE+IETWAVSPRGAGWLFGSRVT+EFNHINNLDLVCRAHQLVQEGLKYMF
Sbjct: 186 GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 245
Query: 451 PDKGLVTVWSAPNYCYRCGNVASIFSFNENMEREVKFFTET 329
DKGLVTVWSAPNYCYRCGNVASI SFNENMEREVKFFTET
Sbjct: 246 QDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET 286
Score = 27.3 bits (59), Expect(2) = 3e-56
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = -2
Query: 341 FHRDHEENNQMRGPR 297
F + EENNQMRGPR
Sbjct: 282 FFTETEENNQMRGPR 296
>pir||T17012 phosphoprotein phosphatase (EC 3.1.3.16) - apple tree
gi|1143511|emb|CAA87385.1| Ser/Thr protein phosphatase
homologous to PPX [Malus x domestica]
gi|1586034|prf||2202340A Ser/Thr protein phosphatase
Length = 303
Score = 212 bits (540), Expect(2) = 6e-56
Identities = 96/101 (95%), Positives = 99/101 (97%)
Frame = -3
Query: 631 GPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF 452
GPFCDLMWSDPE+IETWAVSPRGAGWLFGSRVT+EFNHINNLDLVCRAHQLVQEGLKYMF
Sbjct: 186 GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 245
Query: 451 PDKGLVTVWSAPNYCYRCGNVASIFSFNENMEREVKFFTET 329
DKGLVTVWSAPNYCYRCGNVASI SFN+NMEREVKFFTET
Sbjct: 246 QDKGLVTVWSAPNYCYRCGNVASILSFNDNMEREVKFFTET 286
Score = 27.3 bits (59), Expect(2) = 6e-56
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = -2
Query: 341 FHRDHEENNQMRGPR 297
F + EENNQMRGPR
Sbjct: 282 FFTETEENNQMRGPR 296
>ref|NP_188632.1| protein phosphatase; protein id: At3g19980.1, supported by cDNA:
gi_14582205, supported by cDNA: gi_17381248, supported
by cDNA: gi_20453382 [Arabidopsis thaliana]
gi|11994773|dbj|BAB03163.1| phosphoprotein phosphatase
[Arabidopsis thaliana]
gi|14582206|gb|AAK69404.1|AF275664_1 serine/threonine
protein phosphatase [Arabidopsis thaliana]
gi|17381249|gb|AAL36043.1| AT3g19980/MZE19_3
[Arabidopsis thaliana] gi|20453383|gb|AAM19930.1|
AT3g19980/MZE19_3 [Arabidopsis thaliana]
Length = 303
Score = 211 bits (538), Expect(2) = 1e-55
Identities = 96/101 (95%), Positives = 98/101 (96%)
Frame = -3
Query: 631 GPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF 452
GPFCDLMWSDPE+IETWAVSPRGAGWLFGSRVTTEFNHIN LDLVCRAHQLVQEGLKYMF
Sbjct: 186 GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTTEFNHINKLDLVCRAHQLVQEGLKYMF 245
Query: 451 PDKGLVTVWSAPNYCYRCGNVASIFSFNENMEREVKFFTET 329
DKGLVTVWSAPNYCYRCGNVASI SFN+NMEREVKFFTET
Sbjct: 246 QDKGLVTVWSAPNYCYRCGNVASILSFNDNMEREVKFFTET 286
Score = 27.3 bits (59), Expect(2) = 1e-55
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = -2
Query: 341 FHRDHEENNQMRGPR 297
F + EENNQMRGPR
Sbjct: 282 FFTETEENNQMRGPR 296
>dbj|BAB84606.1| putative Ser/Thr protein phosphatase [Oryza sativa (japonica
cultivar-group)]
Length = 303
Score = 210 bits (534), Expect(2) = 3e-55
Identities = 96/101 (95%), Positives = 97/101 (95%)
Frame = -3
Query: 631 GPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF 452
GPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVT EFNHINNLDLVCRAHQLVQEGLKYMF
Sbjct: 186 GPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTAEFNHINNLDLVCRAHQLVQEGLKYMF 245
Query: 451 PDKGLVTVWSAPNYCYRCGNVASIFSFNENMEREVKFFTET 329
DKGLVTVWSAPNYCYRCGNVASI SF+E MEREVKFFTET
Sbjct: 246 QDKGLVTVWSAPNYCYRCGNVASILSFSETMEREVKFFTET 286
Score = 27.3 bits (59), Expect(2) = 3e-55
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = -2
Query: 341 FHRDHEENNQMRGPR 297
F + EENNQMRGPR
Sbjct: 282 FFTETEENNQMRGPR 296
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 581,262,763
Number of Sequences: 1393205
Number of extensions: 12813136
Number of successful extensions: 32656
Number of sequences better than 10.0: 471
Number of HSP's better than 10.0 without gapping: 30963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32024
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
