Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002079A_C03 KMC002079A_c03
(804 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM91028.1| calcineurin B [Pisum sativum] 172 6e-55
ref|NP_194387.1| calcineurin B-like protein 3; protein id: At4g2... 169 1e-54
ref|NP_200410.1| calcineurin B-like protein 2 (gb|AAC26009.1); p... 170 3e-54
gb|AAM65177.1| calcineurin B-like protein 2 [Arabidopsis thaliana] 170 9e-54
gb|AAL31695.1|AC092390_16 putative calcineurin B-like protein [O... 168 1e-53
>gb|AAM91028.1| calcineurin B [Pisum sativum]
Length = 225
Score = 172 bits (437), Expect(2) = 6e-55
Identities = 86/89 (96%), Positives = 88/89 (98%)
Frame = -1
Query: 804 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 625
ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKI FSFQLYDLKQQGFIERQ
Sbjct: 82 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQ 141
Query: 624 EVKQMLVATLAESGMNLSDDVIESIIDQT 538
EVKQM+VATLAESGMNLSDDVIESIID+T
Sbjct: 142 EVKQMVVATLAESGMNLSDDVIESIIDKT 170
Score = 64.3 bits (155), Expect(2) = 6e-55
Identities = 29/40 (72%), Positives = 34/40 (84%)
Frame = -3
Query: 505 RLTRRNGGTLLLRHPSLLKNMTLQYLRDITTTFPSFVFHS 386
++ + L+LRHPSLLKNMTLQYL+DITTTFPSFVFHS
Sbjct: 181 KIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHS 220
Score = 48.5 bits (114), Expect = 1e-04
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -2
Query: 548 LTRLFEEADTKHDGKIDKEEWRNL 477
+ + FEEADTKHDGKIDKEEWRNL
Sbjct: 167 IDKTFEEADTKHDGKIDKEEWRNL 190
>ref|NP_194387.1| calcineurin B-like protein 3; protein id: At4g26570.1, supported by
cDNA: gi_18253012, supported by cDNA: gi_3309085
[Arabidopsis thaliana] gi|7487041|pir||T08923
calcineurin B-like protein 3 T15N24.20 [imported] -
Arabidopsis thaliana gi|3309086|gb|AAC26010.1|
calcineurin B-like protein 3 [Arabidopsis thaliana]
gi|4938495|emb|CAB43853.1| calcineurin B-like protein 3
[Arabidopsis thaliana] gi|7269509|emb|CAB79512.1|
calcineurin B-like protein 3 [Arabidopsis thaliana]
gi|18253013|gb|AAL62433.1| calcineurin B-like protein 3
[Arabidopsis thaliana] gi|22136404|gb|AAM91280.1|
calcineurin B-like protein 3 [Arabidopsis thaliana]
Length = 226
Score = 169 bits (427), Expect(2) = 1e-54
Identities = 83/89 (93%), Positives = 88/89 (98%)
Frame = -1
Query: 804 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 625
ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI+DKI FSFQLYDLKQQGFIERQ
Sbjct: 83 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIEDKIDFSFQLYDLKQQGFIERQ 142
Query: 624 EVKQMLVATLAESGMNLSDDVIESIIDQT 538
EVKQM+VATLAESGMNLSD++IESIID+T
Sbjct: 143 EVKQMVVATLAESGMNLSDEIIESIIDKT 171
Score = 67.4 bits (163), Expect(2) = 1e-54
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -3
Query: 505 RLTRRNGGTLLLRHPSLLKNMTLQYLRDITTTFPSFVFHS 386
R+ + TL+LRHPSLLKNMTLQYL+DITTTFPSFVFHS
Sbjct: 182 RIDKEEWRTLVLRHPSLLKNMTLQYLKDITTTFPSFVFHS 221
Score = 45.1 bits (105), Expect = 0.001
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 548 LTRLFEEADTKHDGKIDKEEWRNL 477
+ + FEEADTKHDG+IDKEEWR L
Sbjct: 168 IDKTFEEADTKHDGRIDKEEWRTL 191
>ref|NP_200410.1| calcineurin B-like protein 2 (gb|AAC26009.1); protein id:
At5g55990.2, supported by cDNA: 37280., supported by
cDNA: gi_15450406, supported by cDNA: gi_3309083
[Arabidopsis thaliana] gi|11357211|pir||T51357
calcineurin B-like protein 2 [imported] - Arabidopsis
thaliana gi|3309084|gb|AAC26009.1| calcineurin B-like
protein 2 [Arabidopsis thaliana]
gi|9758619|dbj|BAB09281.1| calcineurin B-like protein 2
[Arabidopsis thaliana] gi|15450407|gb|AAK96497.1|
AT5g55990/MDA7_3 [Arabidopsis thaliana]
gi|22655046|gb|AAM98114.1| At5g55990/MDA7_3 [Arabidopsis
thaliana]
Length = 226
Score = 170 bits (430), Expect(2) = 3e-54
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = -1
Query: 804 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 625
ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ
Sbjct: 83 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 142
Query: 624 EVKQMLVATLAESGMNLSDDVIESIIDQT 538
EVKQM+VATLAESGMNL D VIE IID+T
Sbjct: 143 EVKQMVVATLAESGMNLKDTVIEDIIDKT 171
Score = 64.7 bits (156), Expect(2) = 3e-54
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = -3
Query: 505 RLTRRNGGTLLLRHPSLLKNMTLQYLRDITTTFPSFVFHS 386
++ + +L+LRHPSLLKNMTLQYL+DITTTFPSFVFHS
Sbjct: 182 KIDKEEWRSLVLRHPSLLKNMTLQYLKDITTTFPSFVFHS 221
Score = 46.6 bits (109), Expect = 4e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -2
Query: 548 LTRLFEEADTKHDGKIDKEEWRNL 477
+ + FEEADTKHDGKIDKEEWR+L
Sbjct: 168 IDKTFEEADTKHDGKIDKEEWRSL 191
>gb|AAM65177.1| calcineurin B-like protein 2 [Arabidopsis thaliana]
Length = 226
Score = 170 bits (430), Expect(2) = 9e-54
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = -1
Query: 804 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 625
ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ
Sbjct: 83 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 142
Query: 624 EVKQMLVATLAESGMNLSDDVIESIIDQT 538
EVKQM+VATLAESGMNL D VIE IID+T
Sbjct: 143 EVKQMVVATLAESGMNLKDTVIEDIIDKT 171
Score = 63.2 bits (152), Expect(2) = 9e-54
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = -3
Query: 505 RLTRRNGGTLLLRHPSLLKNMTLQYLRDITTTFPSFVFHS 386
++ + +L+LRHPSLLKN+TLQYL+DITTTFPSFVFHS
Sbjct: 182 KIDKEEWRSLVLRHPSLLKNVTLQYLKDITTTFPSFVFHS 221
Score = 46.6 bits (109), Expect = 4e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -2
Query: 548 LTRLFEEADTKHDGKIDKEEWRNL 477
+ + FEEADTKHDGKIDKEEWR+L
Sbjct: 168 IDKTFEEADTKHDGKIDKEEWRSL 191
>gb|AAL31695.1|AC092390_16 putative calcineurin B-like protein [Oryza sativa]
Length = 225
Score = 168 bits (426), Expect(2) = 1e-53
Identities = 83/89 (93%), Positives = 88/89 (98%)
Frame = -1
Query: 804 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 625
ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP+D+KI FSFQLYDLKQQGFIERQ
Sbjct: 82 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPLDEKIDFSFQLYDLKQQGFIERQ 141
Query: 624 EVKQMLVATLAESGMNLSDDVIESIIDQT 538
EVKQM+VATLAESGMNLSD+VIESIID+T
Sbjct: 142 EVKQMVVATLAESGMNLSDEVIESIIDKT 170
Score = 64.3 bits (155), Expect(2) = 1e-53
Identities = 29/40 (72%), Positives = 34/40 (84%)
Frame = -3
Query: 505 RLTRRNGGTLLLRHPSLLKNMTLQYLRDITTTFPSFVFHS 386
++ + L+LRHPSLLKNMTLQYL+DITTTFPSFVFHS
Sbjct: 181 KIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHS 220
Score = 48.5 bits (114), Expect = 1e-04
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -2
Query: 548 LTRLFEEADTKHDGKIDKEEWRNL 477
+ + FEEADTKHDGKIDKEEWRNL
Sbjct: 167 IDKTFEEADTKHDGKIDKEEWRNL 190
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 651,327,784
Number of Sequences: 1393205
Number of extensions: 13603874
Number of successful extensions: 33326
Number of sequences better than 10.0: 356
Number of HSP's better than 10.0 without gapping: 31622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33187
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40896270532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
