Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002066A_C01 KMC002066A_c01
(753 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194193.1| glucose-6-phosphate isomerase; protein id: At4g... 252 5e-66
gb|AAN41353.1| putative glucose-6-phosphate isomerase [Arabidops... 252 5e-66
gb|AAF24124.1|AF120494_1 phosphoglucose isomerase precursor [Ara... 252 5e-66
pir||T09153 glucose-6-phosphate isomerase (EC 5.3.1.9) precursor... 251 6e-66
ref|ZP_00071859.1| hypothetical protein [Trichodesmium erythraeu... 143 2e-33
>ref|NP_194193.1| glucose-6-phosphate isomerase; protein id: At4g24620.1 [Arabidopsis
thaliana] gi|7484979|pir||T05572 glucose-6-phosphate
isomerase (EC 5.3.1.9) - Arabidopsis thaliana
gi|4220528|emb|CAA23001.1| glucose-6-phosphate isomerase
[Arabidopsis thaliana] gi|7269312|emb|CAB79372.1|
glucose-6-phosphate isomerase [Arabidopsis thaliana]
Length = 611
Score = 252 bits (643), Expect = 5e-66
Identities = 122/141 (86%), Positives = 136/141 (95%)
Frame = -3
Query: 751 ALYANDRESITVTVQEVTPRSVGALIALYERAVGIYASIVNINAYHQPGVEAGKKAAGEV 572
ALYAN RESI+VT+QEVTP SVGA+IALYERAVG+YASIVNINAYHQPGVEAGKKAA EV
Sbjct: 471 ALYANGRESISVTIQEVTPTSVGAIIALYERAVGLYASIVNINAYHQPGVEAGKKAAAEV 530
Query: 571 LALQKRVLTVLNEASCKEPVEPFTLEEVADRCHAPEDIEIIYKIIAHMAANDRALIAEGS 392
LALQKRVL+VLNEA+CK+PVEP TLEE+ADRCHAPE+IE+IYKIIAHM+ANDR LIAEG+
Sbjct: 531 LALQKRVLSVLNEATCKDPVEPLTLEEIADRCHAPEEIEMIYKIIAHMSANDRVLIAEGN 590
Query: 391 CGSPRSIKVFLGECNVDELYA 329
CGSPRSIKV+LGECNVD+LYA
Sbjct: 591 CGSPRSIKVYLGECNVDDLYA 611
>gb|AAN41353.1| putative glucose-6-phosphate isomerase [Arabidopsis thaliana]
Length = 613
Score = 252 bits (643), Expect = 5e-66
Identities = 122/141 (86%), Positives = 136/141 (95%)
Frame = -3
Query: 751 ALYANDRESITVTVQEVTPRSVGALIALYERAVGIYASIVNINAYHQPGVEAGKKAAGEV 572
ALYAN RESI+VT+QEVTP SVGA+IALYERAVG+YASIVNINAYHQPGVEAGKKAA EV
Sbjct: 473 ALYANGRESISVTIQEVTPTSVGAIIALYERAVGLYASIVNINAYHQPGVEAGKKAAAEV 532
Query: 571 LALQKRVLTVLNEASCKEPVEPFTLEEVADRCHAPEDIEIIYKIIAHMAANDRALIAEGS 392
LALQKRVL+VLNEA+CK+PVEP TLEE+ADRCHAPE+IE+IYKIIAHM+ANDR LIAEG+
Sbjct: 533 LALQKRVLSVLNEATCKDPVEPLTLEEIADRCHAPEEIEMIYKIIAHMSANDRVLIAEGN 592
Query: 391 CGSPRSIKVFLGECNVDELYA 329
CGSPRSIKV+LGECNVD+LYA
Sbjct: 593 CGSPRSIKVYLGECNVDDLYA 613
>gb|AAF24124.1|AF120494_1 phosphoglucose isomerase precursor [Arabidopsis thaliana]
Length = 612
Score = 252 bits (643), Expect = 5e-66
Identities = 122/141 (86%), Positives = 136/141 (95%)
Frame = -3
Query: 751 ALYANDRESITVTVQEVTPRSVGALIALYERAVGIYASIVNINAYHQPGVEAGKKAAGEV 572
ALYAN RESI+VT+QEVTP SVGA+IALYERAVG+YASIVNINAYHQPGVEAGKKAA EV
Sbjct: 472 ALYANGRESISVTIQEVTPTSVGAIIALYERAVGLYASIVNINAYHQPGVEAGKKAAAEV 531
Query: 571 LALQKRVLTVLNEASCKEPVEPFTLEEVADRCHAPEDIEIIYKIIAHMAANDRALIAEGS 392
LALQKRVL+VLNEA+CK+PVEP TLEE+ADRCHAPE+IE+IYKIIAHM+ANDR LIAEG+
Sbjct: 532 LALQKRVLSVLNEATCKDPVEPLTLEEIADRCHAPEEIEMIYKIIAHMSANDRVLIAEGN 591
Query: 391 CGSPRSIKVFLGECNVDELYA 329
CGSPRSIKV+LGECNVD+LYA
Sbjct: 592 CGSPRSIKVYLGECNVDDLYA 612
>pir||T09153 glucose-6-phosphate isomerase (EC 5.3.1.9) precursor, chloroplast -
spinach gi|3413511|emb|CAA03982.1| glucose-6-phosphate
isomerase [Spinacia oleracea]
Length = 618
Score = 251 bits (642), Expect = 6e-66
Identities = 121/141 (85%), Positives = 133/141 (93%)
Frame = -3
Query: 751 ALYANDRESITVTVQEVTPRSVGALIALYERAVGIYASIVNINAYHQPGVEAGKKAAGEV 572
ALYAN+RESI+VTVQEVTPRSVGA++ALYERAVG+YAS+VNINAYHQPGVEAGKKAA EV
Sbjct: 478 ALYANNRESISVTVQEVTPRSVGAMVALYERAVGLYASLVNINAYHQPGVEAGKKAAAEV 537
Query: 571 LALQKRVLTVLNEASCKEPVEPFTLEEVADRCHAPEDIEIIYKIIAHMAANDRALIAEGS 392
LALQKRVL VLNEASCK+PVEP T+EEVAD CH P+DIE+IYKIIAHMAANDR ++AEG
Sbjct: 538 LALQKRVLAVLNEASCKDPVEPLTIEEVADHCHCPDDIEMIYKIIAHMAANDRVILAEGD 597
Query: 391 CGSPRSIKVFLGECNVDELYA 329
CGSPRSIK FLGECNVDELYA
Sbjct: 598 CGSPRSIKAFLGECNVDELYA 618
>ref|ZP_00071859.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 528
Score = 143 bits (361), Expect = 2e-33
Identities = 72/129 (55%), Positives = 94/129 (72%)
Frame = -3
Query: 751 ALYANDRESITVTVQEVTPRSVGALIALYERAVGIYASIVNINAYHQPGVEAGKKAAGEV 572
ALY NDR+SITVT+ +V P ++GALIALYERAVG Y S+VNINAYHQPGVEAGKKAA V
Sbjct: 402 ALYENDRDSITVTIPKVNPYNLGALIALYERAVGFYGSLVNINAYHQPGVEAGKKAAAAV 461
Query: 571 LALQKRVLTVLNEASCKEPVEPFTLEEVADRCHAPEDIEIIYKIIAHMAANDRALIAEGS 392
L LQ +V+ +L K+ P +LEE++++ A + IE IYKI+ H+AAN R ++ G+
Sbjct: 462 LELQHKVINIL-----KQEKSPLSLEELSEKAGAGDQIETIYKILRHLAANKRGIVFHGN 516
Query: 391 CGSPRSIKV 365
G P + V
Sbjct: 517 VGQPDKLGV 525
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 623,332,468
Number of Sequences: 1393205
Number of extensions: 13080526
Number of successful extensions: 35961
Number of sequences better than 10.0: 341
Number of HSP's better than 10.0 without gapping: 33087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35928
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36595604110
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
