Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002062A_C08 KMC002062A_c08
(637 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_728599.1| CG2199-PB [Drosophila melanogaster] gi|23092763... 33 3.2
ref|NP_612104.1| CG2199-PA [Drosophila melanogaster] gi|7292072|... 33 3.2
ref|NP_665826.1| mast cell maturation inducible protein 1 [Mus m... 33 4.1
gb|AAO17166.1| similar to KIAA0783 [Mus musculus] 32 5.4
dbj|BAC40735.1| unnamed protein product [Mus musculus] 32 5.4
>ref|NP_728599.1| CG2199-PB [Drosophila melanogaster] gi|23092763|gb|AAN11474.1|
CG2199-PB [Drosophila melanogaster]
Length = 733
Score = 33.1 bits (74), Expect = 3.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 266 TSNLEEGKLDSSPFRVKKNYWQCPECSIFSKIP 364
T + EE D P + N +QCPEC +K P
Sbjct: 208 TESEEEEDSDKGPITINTNNFQCPECEFHAKFP 240
>ref|NP_612104.1| CG2199-PA [Drosophila melanogaster] gi|7292072|gb|AAF47485.1|
CG2199-PA [Drosophila melanogaster]
Length = 724
Score = 33.1 bits (74), Expect = 3.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 266 TSNLEEGKLDSSPFRVKKNYWQCPECSIFSKIP 364
T + EE D P + N +QCPEC +K P
Sbjct: 199 TESEEEEDSDKGPITINTNNFQCPECEFHAKFP 231
>ref|NP_665826.1| mast cell maturation inducible protein 1 [Mus musculus]
gi|19548956|gb|AAL90874.1|AF486632_1 mast cell
maturation inducible protein 1 [Mus musculus]
Length = 1033
Score = 32.7 bits (73), Expect = 4.1
Identities = 28/105 (26%), Positives = 43/105 (40%)
Frame = -3
Query: 584 QAHR*SQSSGI*MKMCFFQRLCRIWCPSLLRLWRDIMEEETELEIKK*TTTEVFVFLDDV 405
+A R Q + + MCF +C I C L + ME L TTT V+VF
Sbjct: 390 EAFRLIQENEVLFTMCFIPLVCWIVCTGL----KQQMETGKSLAQTSKTTTAVYVFFLSS 445
Query: 404 LAEE*S*LETNLFKEFC*KLNTQDTANSSS*L*KGWSQVFLLQDC 270
L + +E +LF ++ L + W+Q L ++C
Sbjct: 446 LLQSRGGIEEHLFSDYLQGLCSLAADGI-------WNQKILFEEC 483
>gb|AAO17166.1| similar to KIAA0783 [Mus musculus]
Length = 405
Score = 32.3 bits (72), Expect = 5.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 290 LDSSPFRVKKNYWQCPECSIFSKIP*KG*SLVKTIPQPKHHPRRQIPQ 433
L P + K +YWQC EC + ++T+P RRQI +
Sbjct: 240 LTRMPRKTKNSYWQCSECDQAGSSDMEAEMAMETLPDGTKRSRRQIKE 287
>dbj|BAC40735.1| unnamed protein product [Mus musculus]
Length = 267
Score = 32.3 bits (72), Expect = 5.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 290 LDSSPFRVKKNYWQCPECSIFSKIP*KG*SLVKTIPQPKHHPRRQIPQ 433
L P + K +YWQC EC + ++T+P RRQI +
Sbjct: 78 LTRMPRKTKNSYWQCSECDQAGSSDMEAEMAMETLPDGTKRSRRQIKE 125
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,510,225
Number of Sequences: 1393205
Number of extensions: 10254643
Number of successful extensions: 26268
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26217
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
