Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002042A_C01 KMC002042A_c01
(670 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM13146.1| trehalose-6-phosphate phosphatase [Arabidopsis th... 89 5e-17
ref|NP_199959.1| trehalose-6-phosphate phosphatase; protein id: ... 89 5e-17
ref|NP_193990.1| trehalose-6-phosphate phosphatase - like protei... 87 2e-16
ref|NP_192980.1| putative trehalose-6-phosphate phosphatase (AtT... 87 2e-16
gb|AAG13478.1|AC026758_15 putative trehalose-6-phosphate phospha... 86 3e-16
>gb|AAM13146.1| trehalose-6-phosphate phosphatase [Arabidopsis thaliana]
Length = 384
Score = 89.0 bits (219), Expect = 5e-17
Identities = 46/62 (74%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = -1
Query: 670 LAIYVGDDRTDEDAFKVLREAYK-GCGILVSSAPKESHAFYSLHDTSEVMEFLKSLAAWK 494
L IYVGDDRTDEDAFKVLR+ G GILVS+ PK+S+AFYSL D SEVMEFLKSL WK
Sbjct: 321 LPIYVGDDRTDEDAFKVLRDGPNHGYGILVSAVPKDSNAFYSLRDPSEVMEFLKSLVTWK 380
Query: 493 SS 488
S
Sbjct: 381 RS 382
>ref|NP_199959.1| trehalose-6-phosphate phosphatase; protein id: At5g51460.1,
supported by cDNA: gi_2944177 [Arabidopsis thaliana]
gi|25763511|pir||T52057 trehalose-phosphatase (EC
3.1.3.12) A [validated] - Arabidopsis thaliana
gi|2944178|gb|AAC39369.1| trehalose-6-phosphate
phosphatase [Arabidopsis thaliana]
gi|9758188|dbj|BAB08662.1| trehalose-6-phosphate
phosphatase [Arabidopsis thaliana]
Length = 385
Score = 89.0 bits (219), Expect = 5e-17
Identities = 46/62 (74%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = -1
Query: 670 LAIYVGDDRTDEDAFKVLREAYK-GCGILVSSAPKESHAFYSLHDTSEVMEFLKSLAAWK 494
L IYVGDDRTDEDAFKVLR+ G GILVS+ PK+S+AFYSL D SEVMEFLKSL WK
Sbjct: 322 LPIYVGDDRTDEDAFKVLRDGPNHGYGILVSAVPKDSNAFYSLRDPSEVMEFLKSLVTWK 381
Query: 493 SS 488
S
Sbjct: 382 RS 383
>ref|NP_193990.1| trehalose-6-phosphate phosphatase - like protein; protein id:
At4g22590.1 [Arabidopsis thaliana]
gi|7488398|pir||T05453 trehalose-6-phosphate phosphatase
homolog F7K2.170 - Arabidopsis thaliana
gi|3892714|emb|CAA22164.1| trehalose-6-phosphate
phosphatase-like protein [Arabidopsis thaliana]
gi|7269105|emb|CAB79214.1| trehalose-6-phosphate
phosphatase-like protein [Arabidopsis thaliana]
Length = 377
Score = 87.4 bits (215), Expect = 2e-16
Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -1
Query: 670 LAIYVGDDRTDEDAFKVLREAYKGCGILVSSAPKESHAFYSLHDTSEVMEFLKSLAAW-- 497
L I++GDD+TDEDAFKVLRE +G GILVSS PKES+AFYSL D SEV +FLK+L W
Sbjct: 310 LPIFIGDDKTDEDAFKVLREGNRGFGILVSSVPKESNAFYSLRDPSEVKKFLKTLVKWGK 369
Query: 496 KSSSLNSF 473
SS SF
Sbjct: 370 MESSKTSF 377
>ref|NP_192980.1| putative trehalose-6-phosphate phosphatase (AtTPPA); protein id:
At4g12430.1, supported by cDNA: gi_16648940 [Arabidopsis
thaliana] gi|7488399|pir||T07635 trehalose-6-phosphate
phosphatase homolog T1P17.20 - Arabidopsis thaliana
gi|4725942|emb|CAB41713.1| putative
trehalose-6-phosphate phosphatase (AtTPPA) [Arabidopsis
thaliana] gi|7267945|emb|CAB78286.1| putative
trehalose-6-phosphate phosphatase (AtTPPA) [Arabidopsis
thaliana] gi|16648941|gb|AAL24322.1| putative
trehalose-6-phosphate phosphatase (AtTPPA) [Arabidopsis
thaliana] gi|27311921|gb|AAO00926.1| putative
trehalose-6-phosphate phosphatase (AtTPPA) [Arabidopsis
thaliana]
Length = 368
Score = 87.4 bits (215), Expect = 2e-16
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = -1
Query: 670 LAIYVGDDRTDEDAFKVLREAYKGCGILVSSAPKESHAFYSLHDTSEVMEFLKSLAAWKS 491
L IY+GDD TDEDAFKVLR+ +G GILVSS PKES+AFYSL D SEV +FLK+L W
Sbjct: 301 LPIYIGDDTTDEDAFKVLRDGNRGFGILVSSIPKESNAFYSLRDPSEVKKFLKTLVKWAK 360
Query: 490 SSLNS 476
NS
Sbjct: 361 LEKNS 365
>gb|AAG13478.1|AC026758_15 putative trehalose-6-phosphate phosphatase [Oryza sativa (japonica
cultivar-group)]
Length = 382
Score = 86.3 bits (212), Expect = 3e-16
Identities = 42/62 (67%), Positives = 49/62 (78%)
Frame = -1
Query: 670 LAIYVGDDRTDEDAFKVLREAYKGCGILVSSAPKESHAFYSLHDTSEVMEFLKSLAAWKS 491
L IYVGDD+TDEDAFKVL+ G GILVSS PK++ AFYS+ D +EVMEFLK LA+WK
Sbjct: 320 LPIYVGDDKTDEDAFKVLKANSIGFGILVSSVPKDTDAFYSVRDPAEVMEFLKKLASWKE 379
Query: 490 SS 485
S
Sbjct: 380 ES 381
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 559,115,423
Number of Sequences: 1393205
Number of extensions: 12113878
Number of successful extensions: 26338
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 25344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26296
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29138478756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
