Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002034A_C01 KMC002034A_c01
(701 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL73563.1|AC079632_7 Putative serine carboxypeptidase [Oryza... 155 7e-37
ref|NP_179876.1| putative serine carboxypeptidase I; protein id:... 155 7e-37
ref|NP_179880.1| putative serine carboxypeptidase II; protein id... 154 9e-37
ref|NP_179883.1| putative serine carboxypeptidase I; protein id:... 154 1e-36
ref|NP_177473.1| putative serine carboxypeptidase; protein id: A... 154 1e-36
>gb|AAL73563.1|AC079632_7 Putative serine carboxypeptidase [Oryza sativa]
gi|19920203|gb|AAM08635.1|AC108883_8 Putative serine
carboxypeptidase [Oryza sativa]
Length = 432
Score = 155 bits (391), Expect = 7e-37
Identities = 64/103 (62%), Positives = 83/103 (80%)
Frame = -2
Query: 694 DISSSFEYHVHLSEKGYRSLIYSGDHDLTVPFLATQAWVRSLNYSIVDDWRQWRINDQVG 515
DI SS YH+ L+ +GYRSLIYSGDHD+ +PF+ TQAW+RSLN+S+VD+WR W ++ QV
Sbjct: 330 DIKSSVRYHLDLTTRGYRSLIYSGDHDMIIPFIGTQAWIRSLNFSVVDEWRPWFVDGQVA 389
Query: 514 GYTRTYSNRMTFATVKGGGHTAPEYKPEECFTIYSRWISNMAL 386
GY R+YSN +TFATVKGGGHTAPEY P++C + +RW+S L
Sbjct: 390 GYIRSYSNNLTFATVKGGGHTAPEYMPKQCLAMLARWVSGNPL 432
>ref|NP_179876.1| putative serine carboxypeptidase I; protein id: At2g22920.1
[Arabidopsis thaliana] gi|25289780|pir||E84618 probable
serine carboxypeptidase I [imported] - Arabidopsis
thaliana gi|3445209|gb|AAC32439.1| putative serine
carboxypeptidase I [Arabidopsis thaliana]
Length = 435
Score = 155 bits (391), Expect = 7e-37
Identities = 70/99 (70%), Positives = 82/99 (82%)
Frame = -2
Query: 694 DISSSFEYHVHLSEKGYRSLIYSGDHDLTVPFLATQAWVRSLNYSIVDDWRQWRINDQVG 515
DI++S YH++ S GYRSLIYSGDHDL VPFLATQAW++SLNYSI+ +WR W I DQ+
Sbjct: 334 DINNSIPYHMNNSISGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIHEWRPWMIKDQIA 393
Query: 514 GYTRTYSNRMTFATVKGGGHTAPEYKPEECFTIYSRWIS 398
GYTRTYSN+MTFATVKG GHTA EYKP E F ++ RWIS
Sbjct: 394 GYTRTYSNKMTFATVKGSGHTA-EYKPNETFIMFQRWIS 431
>ref|NP_179880.1| putative serine carboxypeptidase II; protein id: At2g22970.1,
supported by cDNA: gi_14517521 [Arabidopsis thaliana]
gi|25289781|pir||A84619 probable serine carboxypeptidase
II [imported] - Arabidopsis thaliana
gi|3169171|gb|AAC17814.1| putative serine
carboxypeptidase II [Arabidopsis thaliana]
gi|14517522|gb|AAK62651.1| T20K9.18/T20K9.18
[Arabidopsis thaliana] gi|20197275|gb|AAM15007.1|
putative serine carboxypeptidase II [Arabidopsis
thaliana] gi|21360533|gb|AAM47382.1| At2g22970/T20K9.18
[Arabidopsis thaliana] gi|23397211|gb|AAN31888.1|
putative serine carboxypeptidase II [Arabidopsis
thaliana]
Length = 433
Score = 154 bits (390), Expect = 9e-37
Identities = 71/103 (68%), Positives = 83/103 (79%)
Frame = -2
Query: 694 DISSSFEYHVHLSEKGYRSLIYSGDHDLTVPFLATQAWVRSLNYSIVDDWRQWRINDQVG 515
DI SS YH++ S GYRSLIYSGDHDL VPFLATQAW++SLNYSI+D+WR W I DQ+
Sbjct: 332 DIKSSVPYHMNNSVSGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIDEWRPWMIRDQIT 391
Query: 514 GYTRTYSNRMTFATVKGGGHTAPEYKPEECFTIYSRWISNMAL 386
GYTRTYSN+MTFATVKG GHTA E KP+E F ++ RWI+ L
Sbjct: 392 GYTRTYSNKMTFATVKGSGHTA-ENKPQESFIMFRRWINGQPL 433
>ref|NP_179883.1| putative serine carboxypeptidase I; protein id: At2g23000.1,
supported by cDNA: 33165. [Arabidopsis thaliana]
gi|25289783|pir||D84619 probable serine carboxypeptidase
I [imported] - Arabidopsis thaliana
gi|3169174|gb|AAC17817.1| putative serine
carboxypeptidase I [Arabidopsis thaliana]
Length = 437
Score = 154 bits (389), Expect = 1e-36
Identities = 72/103 (69%), Positives = 82/103 (78%)
Frame = -2
Query: 694 DISSSFEYHVHLSEKGYRSLIYSGDHDLTVPFLATQAWVRSLNYSIVDDWRQWRINDQVG 515
+I SS YH+ S GYRSLIYSGDHD+T+PF ATQAW++SLNYSIVDDWR W INDQ+
Sbjct: 336 NIISSVPYHMDNSINGYRSLIYSGDHDITMPFQATQAWIKSLNYSIVDDWRPWMINDQIA 395
Query: 514 GYTRTYSNRMTFATVKGGGHTAPEYKPEECFTIYSRWISNMAL 386
GYTRTYSN+MTFATVKGGGHTA EY P E ++ RWIS L
Sbjct: 396 GYTRTYSNKMTFATVKGGGHTA-EYLPNESSIMFQRWISGQPL 437
>ref|NP_177473.1| putative serine carboxypeptidase; protein id: At1g73300.1
[Arabidopsis thaliana] gi|25289779|pir||C96759 protein
serine carboxypeptidase T18K17.3 [imported] -
Arabidopsis thaliana
gi|12324326|gb|AAG52135.1|AC010556_17 putative serine
carboxypeptidase; 5659-8034 [Arabidopsis thaliana]
Length = 441
Score = 154 bits (388), Expect = 1e-36
Identities = 69/103 (66%), Positives = 82/103 (78%)
Frame = -2
Query: 694 DISSSFEYHVHLSEKGYRSLIYSGDHDLTVPFLATQAWVRSLNYSIVDDWRQWRINDQVG 515
DI SS YHV+ S GYRSLIYSGDHDL VP+L TQAW+RSLNYSI+DDWR W I +Q+
Sbjct: 340 DIKSSMPYHVNNSISGYRSLIYSGDHDLEVPYLGTQAWIRSLNYSIIDDWRPWMIKNQIA 399
Query: 514 GYTRTYSNRMTFATVKGGGHTAPEYKPEECFTIYSRWISNMAL 386
GYTRTY+N+MTFAT+KGGGHT E+KPEE ++ RWI+ L
Sbjct: 400 GYTRTYANKMTFATIKGGGHTI-EFKPEEASIMFQRWINGQPL 441
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 587,603,235
Number of Sequences: 1393205
Number of extensions: 12541768
Number of successful extensions: 26127
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 25209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26002
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 32250355128
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
