KMC002032A_c02
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KMC002032A_C02 KMC002032A_c02
aaaagtgcaataattttttttttCTTTCTTTTGCAATGCTCTCGAACAAATCTGCTTTCA
ATAGATTTAACTTGCACCTCTCTGTTTCTCAGAAACTAACATGACCTTATTTTTAATTAC
TTTGAAAACCGAAAGGGGATCCAAACCAAATAATTTTCCGGGTGGGGAACAAATAACAAT
GACCTCTATGGAAAGAGTAAGCTTGGAAAATTCATTCCTGATATGCAGTAATATATACTA
CAGATTTGAGTCTTAATTAGAAACTTATTGAAATTGTAGCACACAAGCACCTTGTAATTA
ATTAAGGAAAAACTTCAATGAGAGACTTGAAGCCACATATGGGTGTAACTCTTGTAGCTG
CTGGAAGCCTGCATCATATATGAGCTTCTCCCATTCTTTCTTCTCTCTTTCTTTGTCCAT
TGAACATAGTCAGCATGACCAAGTCATAGTCCAATTTCAACTCAGTCAGTTCTCTGTCAT
CACTTGTTTCATCAATTGATATGTCTATGATAATCACTTTGCCTTCTTTCCCTCTCCCTG
AAATAGCTTCTTTGCAGTTCTTCAATATCTTTAAGGAGAGCTCATCATTCCAGTCATGCA
GAACCCACTTCAACAGAACAGCATCTGCAGGAGGGACAGACTTGAACATATCACCACCAA
CAAAGTTCAAATTCTCATCTCCAGTCAAGTTAGCCACAAGCTGAGGCTGATCCAAAACCG
TACACT
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002032A_C02 KMC002032A_c02
(726 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC58013.1| S-adenosyl-L-methionine: 2,7,4'-trihydroxyisofla... 234 7e-61
dbj|BAC58011.1| S-adenosyl-L-methionine: 2,7,4'-trihydroxyisofla... 216 3e-55
pir||T06786 6a-hydroxymaackiain methyltransferase (EC 2.1.1.-) -... 202 4e-51
gb|AAM23005.1|AF502434_1 orcinol O-methyltransferase [Rosa hybri... 141 1e-32
gb|AAB71213.1| methyltransferase [Prunus armeniaca] 139 3e-32
>dbj|BAC58013.1| S-adenosyl-L-methionine: 2,7,4'-trihydroxyisoflavanone
4'-O-methyltransferase [Lotus japonicus]
Length = 365
Score = 234 bits (598), Expect = 7e-61
Identities = 119/140 (85%), Positives = 128/140 (91%)
Frame = -3
Query: 724 CTVLDQPQLVANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEA 545
CTV DQPQ+VANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEA
Sbjct: 227 CTVFDQPQVVANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEA 286
Query: 544 ISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNGQRKREERMGEAHI*CRL 365
ISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNG ++RE++ E I
Sbjct: 287 ISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNG-KEREKKEWEKLIYDAG 345
Query: 364 PAATRVTPICGFKSLIEVFP 305
++ ++TPICGFKSLIEVFP
Sbjct: 346 FSSYKITPICGFKSLIEVFP 365
>dbj|BAC58011.1| S-adenosyl-L-methionine: 2,7,4'-trihydroxyisoflavanone
4'-O-methyltransferase [Glycyrrhiza echinata]
Length = 367
Score = 216 bits (549), Expect = 3e-55
Identities = 109/140 (77%), Positives = 123/140 (87%)
Frame = -3
Query: 724 CTVLDQPQLVANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEA 545
CTV DQPQ+V NL+G+ENL FVGGDMFKS+PPADAVLLKWVLHDWNDELSLKILKN KEA
Sbjct: 229 CTVFDQPQVVGNLSGNENLKFVGGDMFKSIPPADAVLLKWVLHDWNDELSLKILKNSKEA 288
Query: 544 ISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNGQRKREERMGEAHI*CRL 365
ISG+GKEGKVIIIDISIDE S DRELTEL+LDYDLVMLTMFNG ++RE++ E I
Sbjct: 289 ISGKGKEGKVIIIDISIDEASGDRELTELQLDYDLVMLTMFNG-KEREKKEWEKLISDAG 347
Query: 364 PAATRVTPICGFKSLIEVFP 305
++ ++TPICGFKSLIEVFP
Sbjct: 348 FSSYKITPICGFKSLIEVFP 367
>pir||T06786 6a-hydroxymaackiain methyltransferase (EC 2.1.1.-) - garden pea
gi|1568637|gb|AAC49856.1| 6a-hydroxymaackiain
methyltransferase [Pisum sativum]
Length = 360
Score = 202 bits (514), Expect = 4e-51
Identities = 104/140 (74%), Positives = 119/140 (84%)
Frame = -3
Query: 724 CTVLDQPQLVANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEA 545
CTV DQPQ+V NLTG+ENLNFVGGDMFKSVP ADAVLLKWVLHDWNDELSLKILKN KEA
Sbjct: 222 CTVFDQPQVVGNLTGNENLNFVGGDMFKSVPSADAVLLKWVLHDWNDELSLKILKNSKEA 281
Query: 544 ISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNGQRKREERMGEAHI*CRL 365
IS +GK+GKVIIIDISIDE SDDR LTEL+L+YD+VMLTMF G ++R ++ E I
Sbjct: 282 ISHKGKDGKVIIIDISIDENSDDRGLTELQLEYDVVMLTMFLG-KERTKKEWEKLIYDAG 340
Query: 364 PAATRVTPICGFKSLIEVFP 305
+ ++TPICGFKSLIEV+P
Sbjct: 341 FSRYKITPICGFKSLIEVYP 360
>gb|AAM23005.1|AF502434_1 orcinol O-methyltransferase [Rosa hybrid cultivar]
gi|27527924|emb|CAD29459.1| orcinol O-methyltransferase
[Rosa chinensis]
Length = 366
Score = 141 bits (355), Expect = 1e-32
Identities = 67/140 (47%), Positives = 96/140 (67%)
Frame = -3
Query: 724 CTVLDQPQLVANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEA 545
CTVLD P +VA+L G +NL + GGDMF++VPPAD VLLKW+LHDWNDE +KILK + A
Sbjct: 228 CTVLDLPHVVADLQGSKNLKYTGGDMFEAVPPADTVLLKWILHDWNDEECIKILKRSRVA 287
Query: 544 ISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNGQRKREERMGEAHI*CRL 365
I+ + K+GKVIIID+ ++ D E E +L +D++M+ + GQ + E+ +
Sbjct: 288 ITSKDKKGKVIIIDMMMENQKGDEESIETQLFFDMLMMALVRGQERNEKEWAKLFTDAGF 347
Query: 364 PAATRVTPICGFKSLIEVFP 305
+ ++TPI G +SLIEV+P
Sbjct: 348 -SDYKITPILGLRSLIEVYP 366
>gb|AAB71213.1| methyltransferase [Prunus armeniaca]
Length = 354
Score = 139 bits (351), Expect = 3e-32
Identities = 64/140 (45%), Positives = 99/140 (70%)
Frame = -3
Query: 724 CTVLDQPQLVANLTGDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEA 545
CTVLD P +VA+L G +NL +V GDMF++VP ADA+ LKW+LHDW+DE +KIL+ CK A
Sbjct: 216 CTVLDLPHVVADLKGSKNLEYVAGDMFEAVPAADAIFLKWILHDWSDEECVKILERCKAA 275
Query: 544 ISGRGKEGKVIIIDISIDETSDDRELTELKLDYDLVMLTMFNGQRKREERMGEAHI*CRL 365
++ GK+GKVII++++++ + D+E E +L +D+ M+ M G+ + E+ +
Sbjct: 276 VTREGKKGKVIIVEMTVENKNTDKESGETQLFFDMHMMVMSTGKERNEKEWAKLFSDAGF 335
Query: 364 PAATRVTPICGFKSLIEVFP 305
+ ++TP+ GFKSLIEV+P
Sbjct: 336 -SQYKITPLFGFKSLIEVYP 354
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 584,887,604
Number of Sequences: 1393205
Number of extensions: 12004370
Number of successful extensions: 31981
Number of sequences better than 10.0: 201
Number of HSP's better than 10.0 without gapping: 30409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31829
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34062062287
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
EST assemble image
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|
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|
clone |
accession |
position |
1 |
MR086a03_f |
BP082580 |
1 |
521 |
2 |
MR044d06_f |
BP079402 |
24 |
446 |
3 |
MR007b02_f |
BP076453 |
24 |
455 |
4 |
SPD060a04_f |
BP048738 |
32 |
645 |
5 |
MFB072a11_f |
BP039213 |
36 |
648 |
6 |
MFB088f03_f |
BP040439 |
39 |
624 |
7 |
MR076d06_f |
BP081845 |
43 |
218 |
8 |
GNf032d03 |
BP069690 |
50 |
558 |
9 |
MR025g01_f |
BP077934 |
55 |
457 |
10 |
GNf015g06 |
BP068479 |
70 |
203 |
11 |
MR054b12_f |
BP080143 |
88 |
420 |
12 |
MR069f03_f |
BP081318 |
88 |
147 |
13 |
MR027f06_f |
BP078097 |
88 |
598 |
14 |
MR090e01_f |
BP082926 |
88 |
502 |
15 |
MR015b07_f |
BP077086 |
88 |
311 |
16 |
MR017b01_f |
BP077242 |
90 |
543 |
17 |
MFB034f08_f |
BP036513 |
92 |
653 |
18 |
MR043d01_f |
BP079319 |
139 |
335 |
19 |
MR041h04_f |
BP079202 |
153 |
582 |
20 |
MR015c10_f |
BP077099 |
162 |
582 |
21 |
MR064a07_f |
BP080881 |
176 |
573 |
22 |
MFB010e02_f |
BP034638 |
189 |
594 |
23 |
MR091f01_f |
BP083014 |
189 |
583 |
24 |
MR058e10_f |
BP080465 |
189 |
707 |
25 |
GENf040a07 |
BP060047 |
191 |
690 |
26 |
MR082h09_f |
BP082349 |
192 |
584 |
27 |
MR045b11_f |
BP079465 |
192 |
618 |
28 |
GNf093a02 |
BP074209 |
192 |
641 |
29 |
MR094h05_f |
BP083258 |
192 |
582 |
30 |
MR040h01_f |
BP079119 |
192 |
609 |
31 |
GNf080d07 |
BP073272 |
192 |
350 |
32 |
MR069d03_f |
BP081296 |
192 |
310 |
33 |
GNf032b03 |
BP069671 |
195 |
681 |
34 |
SPD061f05_f |
BP048870 |
200 |
726 |
35 |
GNf037a08 |
BP070032 |
201 |
645 |
36 |
MPD005h04_f |
AV770358 |
202 |
771 |
37 |
MR096a10_f |
BP083335 |
206 |
630 |
38 |
MR091a02_f |
BP082965 |
206 |
610 |
39 |
MFB068b10_f |
BP038914 |
209 |
676 |
40 |
MFB023c05_f |
BP035645 |
215 |
399 |
41 |
GNf006e10 |
BP067817 |
219 |
471 |
42 |
MR058g07_f |
BP080479 |
241 |
667 |
|
Lotus japonicus
Kazusa DNA Research Institute