Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002022A_C01 KMC002022A_c01
(477 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM93692.1| putative PKCq-interacting protein [Oryza sativa (... 159 1e-38
ref|NP_192404.1| putative thioredoxin; protein id: At4g04950.1, ... 147 7e-35
ref|NP_596647.1| glutaredoxin-like protein [Schizosaccharomyces ... 117 6e-26
gb|EAA07378.1| agCP10114 [Anopheles gambiae str. PEST] 115 2e-25
ref|NP_421308.1| glutaredoxin-related protein [Caulobacter cresc... 112 2e-24
>gb|AAM93692.1| putative PKCq-interacting protein [Oryza sativa (japonica
cultivar-group)]
Length = 491
Score = 159 bits (402), Expect = 1e-38
Identities = 74/90 (82%), Positives = 84/90 (93%)
Frame = -2
Query: 458 ASSPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFP 279
+S+PVMLFMKGTPDAPRCGFSS+VV AL++ GV FG FDIL+D+EVRQGLKT+SNWPTFP
Sbjct: 402 SSAPVMLFMKGTPDAPRCGFSSKVVNALKQAGVSFGAFDILSDEEVRQGLKTYSNWPTFP 461
Query: 278 QLYYKSELIGGCDIVMELRNNGELKSTLSE 189
QLYYKSELIGGCDIV+EL +GELKSTLSE
Sbjct: 462 QLYYKSELIGGCDIVLELEKSGELKSTLSE 491
Score = 135 bits (339), Expect = 3e-31
Identities = 60/94 (63%), Positives = 75/94 (78%)
Frame = -2
Query: 470 EEIDASSPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNW 291
E++ S PV LFMKGTP+ PRCGFS +VV L++EGV+FG FDILTD++VR+G+K FSNW
Sbjct: 155 EQLVNSHPVFLFMKGTPEQPRCGFSRKVVDVLKQEGVEFGSFDILTDNDVREGMKKFSNW 214
Query: 290 PTFPQLYYKSELIGGCDIVMELRNNGELKSTLSE 189
PTFPQLY K EL+GGCDIV+ + +GELK E
Sbjct: 215 PTFPQLYCKGELLGGCDIVIAMHESGELKDVFKE 248
Score = 121 bits (304), Expect = 3e-27
Identities = 55/88 (62%), Positives = 68/88 (76%)
Frame = -2
Query: 452 SPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFPQL 273
S VM F+KGTP+ P+CGFS ++V L++E + F FDILTDDEVRQGLK SNWP++PQL
Sbjct: 297 STVMAFIKGTPEEPKCGFSGKLVHILKQEKIPFSSFDILTDDEVRQGLKLLSNWPSYPQL 356
Query: 272 YYKSELIGGCDIVMELRNNGELKSTLSE 189
Y EL+GG DIVME+ +GELK LSE
Sbjct: 357 YINGELVGGSDIVMEMHKSGELKKVLSE 384
>ref|NP_192404.1| putative thioredoxin; protein id: At4g04950.1, supported by cDNA:
gi_16648848 [Arabidopsis thaliana]
gi|25407304|pir||C85062 probable thioredoxin [imported]
- Arabidopsis thaliana gi|4325345|gb|AAD17344.1| similar
to thioredoxin-like proteins (Pfam: PF00085, Score=42.9,
E=1.4e-11, N=1); contains similarity to dihydroorotases
(Pfam: PF00744, Score=154.9, E=1.4e-42, N=1)
[Arabidopsis thaliana] gi|7267254|emb|CAB81037.1|
putative thioredoxin [Arabidopsis thaliana]
gi|16648849|gb|AAL25614.1| AT4g04950/T1J1_6 [Arabidopsis
thaliana] gi|22655350|gb|AAM98267.1| At4g04950/T1J1_6
[Arabidopsis thaliana]
Length = 488
Score = 147 bits (370), Expect = 7e-35
Identities = 68/89 (76%), Positives = 78/89 (87%)
Frame = -2
Query: 455 SSPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFPQ 276
SS VMLFMKG+PD P+CGFSS+VV AL+ E V FG FDILTD+EVRQG+K FSNWPTFPQ
Sbjct: 400 SSEVMLFMKGSPDEPKCGFSSKVVKALRGENVSFGSFDILTDEEVRQGIKNFSNWPTFPQ 459
Query: 275 LYYKSELIGGCDIVMELRNNGELKSTLSE 189
LYYK ELIGGCDI+MEL +G+LK+TLSE
Sbjct: 460 LYYKGELIGGCDIIMELSESGDLKATLSE 488
Score = 125 bits (314), Expect = 2e-28
Identities = 56/89 (62%), Positives = 71/89 (78%)
Frame = -2
Query: 455 SSPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFPQ 276
S PVMLFMKG P+ P+CGFS +VV L +E ++FG FDIL DDEVRQGLK +SNW ++PQ
Sbjct: 293 SKPVMLFMKGRPEEPKCGFSGKVVEILNQEKIEFGSFDILLDDEVRQGLKVYSNWSSYPQ 352
Query: 275 LYYKSELIGGCDIVMELRNNGELKSTLSE 189
LY K EL+GG DIV+E++ +GELK L+E
Sbjct: 353 LYVKGELMGGSDIVLEMQKSGELKKVLTE 381
Score = 124 bits (312), Expect = 4e-28
Identities = 57/94 (60%), Positives = 70/94 (73%)
Frame = -2
Query: 470 EEIDASSPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNW 291
E++ S PVMLFMKG P+ PRCGFS +VV L+E VDFG FDIL+D+EVR+GLK FSNW
Sbjct: 158 EKLTNSHPVMLFMKGIPEEPRCGFSRKVVDILKEVNVDFGSFDILSDNEVREGLKKFSNW 217
Query: 290 PTFPQLYYKSELIGGCDIVMELRNNGELKSTLSE 189
PTFPQLY EL+GG DI + + +GELK +
Sbjct: 218 PTFPQLYCNGELLGGADIAIAMHESGELKDAFKD 251
>ref|NP_596647.1| glutaredoxin-like protein [Schizosaccharomyces pombe]
gi|7490589|pir||T40018 glutaredoxin-like protein -
fission yeast (Schizosaccharomyces pombe)
gi|3650389|emb|CAA21098.1| glutaredoxin-like protein
[Schizosaccharomyces pombe]
Length = 244
Score = 117 bits (293), Expect = 6e-26
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -2
Query: 446 VMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFPQLYY 267
VMLF+KGTP P CGFS ++VG L+E+ V +G F+IL DD VRQGLK FS+WPTFPQLY
Sbjct: 159 VMLFLKGTPSEPACGFSRKLVGLLREQNVQYGFFNILADDSVRQGLKVFSDWPTFPQLYI 218
Query: 266 KSELIGGCDIVMELRNNGELKSTL 195
K E +GG DIV E+ NGEL+ L
Sbjct: 219 KGEFVGGLDIVSEMIENGELQEML 242
>gb|EAA07378.1| agCP10114 [Anopheles gambiae str. PEST]
Length = 221
Score = 115 bits (289), Expect = 2e-25
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = -2
Query: 452 SPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFPQL 273
S VM+FMKG + PRCGFS +++ + + GV++ FDILTD+ VRQGLKTFSNWPT+PQ+
Sbjct: 134 SKVMIFMKGDRNTPRCGFSKQLIAIVNDTGVEYDTFDILTDEAVRQGLKTFSNWPTYPQV 193
Query: 272 YYKSELIGGCDIVMELRNNGELKSTLS 192
Y ELIGG DI+ EL GELK TL+
Sbjct: 194 YVSGELIGGLDIIKELLEGGELKETLN 220
>ref|NP_421308.1| glutaredoxin-related protein [Caulobacter crescentus CB15]
gi|25318346|pir||H87559 glutaredoxin-related protein
[imported] - Caulobacter crescentus
gi|13424062|gb|AAK24476.1| glutaredoxin-related protein
[Caulobacter crescentus CB15]
Length = 113
Score = 112 bits (281), Expect = 2e-24
Identities = 53/90 (58%), Positives = 67/90 (73%)
Frame = -2
Query: 458 ASSPVMLFMKGTPDAPRCGFSSRVVGALQEEGVDFGHFDILTDDEVRQGLKTFSNWPTFP 279
A PV++FMKG PD PRCGFSS VV L GV+F D+L D+++RQG+KTF++WPT P
Sbjct: 18 ADHPVVVFMKGVPDQPRCGFSSVVVQILDHLGVEFVGVDVLQDEDLRQGVKTFTDWPTIP 77
Query: 278 QLYYKSELIGGCDIVMELRNNGELKSTLSE 189
QLY K E IGG DIV E+ +GELK+ L+E
Sbjct: 78 QLYVKGEFIGGSDIVREMFQSGELKTFLTE 107
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 427,963,720
Number of Sequences: 1393205
Number of extensions: 9346266
Number of successful extensions: 24176
Number of sequences better than 10.0: 236
Number of HSP's better than 10.0 without gapping: 23444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24124
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13106568690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
