KMC002020A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC002020A_C01 KMC002020A_c01
atttggcagcgttatagcgcgcgcttcaggattATTATATTATAATAGATAGATAGATAA
ATTGAATGAGAAATAGAGATAACATGACATTAAAGTTATCTCTTGGATATAATCACAAAT
GATTCAAATATTCACTCTTAACATAATGCACACCATGAAGTCTTCGTCAAAAAGCAAAAA
AATAAAAATCAATACATAAGAACAATAAAAGAGATAGAGAATTGAAGAAGTTAAAAGCGC
ACAAGACTTCACTTTGATAATGTTGTTTAACCCTTCTTCCACTTGAGAGCTAATTGGAAT
ATTTGGTTTGTTGAAGACCCATTTTCCTTTAGAGTTGTAGCAGCTGCCTCTTTGAGATCC
TTCATTTTGCAACGAAGCTTCTTACCTTCCTCACCTTGCATCAACGTCCTCACAACTCTC
GCAATTTCTACCAACTCCACCAACCCATTCTCCCCTACCTTTGGCCTCAGTGCCACCTTC
ACGTCCTCAGTGACCAAGACCGCATTCATCCTCTGCTCTGCATAGAGTGGCCAGGCCACC
AGAGGCACCCCATTCGCCACACTTTCAAGGACGGAGTTCCAACCACAATGACTCAAGAAT
CCACCGATGGAAGCATGGCTCAACACTTTTGCCTGTGGTGCCC


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002020A_C01 KMC002020A_c01
         (643 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9AR73|HQGT_RAUSE Hydroquinone glucosyltransferase (Arbutin s...   177  8e-44
ref|NP_192016.1| putative flavonol glucosyltransferase; protein ...   172  3e-42
pir||T01732 UTP-glucose glucosyltransferase homolog A_IG002N01.1...   172  3e-42
dbj|BAB86931.1| glucosyltransferase-13 [Vigna angularis]              162  4e-39
ref|NP_171649.1| flavonol 3-o-glucosyltransferase, putative; pro...   155  6e-37

>sp|Q9AR73|HQGT_RAUSE Hydroquinone glucosyltransferase (Arbutin synthase)
           gi|13508844|emb|CAC35167.1| arbutin synthase [Rauvolfia
           serpentina]
          Length = 470

 Score =  177 bits (450), Expect = 8e-44
 Identities = 82/122 (67%), Positives = 101/122 (82%)
 Frame = -3

Query: 641 APQAKVLSHASIGGFLSHCGWNSVLESVANGVPLVAWPLYAEQRMNAVLVTEDVKVALRP 462
           APQ ++LSH S GGFL+HCGWNS+LESV NGVPL+AWPLYAEQ+MNAV++TE +KVALRP
Sbjct: 343 APQTEILSHGSTGGFLTHCGWNSILESVVNGVPLIAWPLYAEQKMNAVMLTEGLKVALRP 402

Query: 461 KVGENGLVELVEIARVVRTLMQGEEGKKLRCKMKDLKEAAATTLKENGSSTNQIFQLALK 282
           K GENGL+  VEIA  V+ LM+GEEGKK R  MKDLK+AA+  L ++GSST  + +LA K
Sbjct: 403 KAGENGLIGRVEIANAVKGLMEGEEGKKFRSTMKDLKDAASRALSDDGSSTKALAELACK 462

Query: 281 WK 276
           W+
Sbjct: 463 WE 464

>ref|NP_192016.1| putative flavonol glucosyltransferase; protein id: At4g01070.1,
           supported by cDNA: 1204., supported by cDNA: gi_13430699
           [Arabidopsis thaliana] gi|28380085|sp|Q9M156|HQGT_ARATH
           Probable hydroquinone glucosyltransferase (Arbutin
           synthase) gi|25286798|pir||B85014 probable flavonol
           glucosyltransferase [imported] - Arabidopsis thaliana
           gi|7267604|emb|CAB80916.1| putative flavonol
           glucosyltransferase [Arabidopsis thaliana]
           gi|13430700|gb|AAK25972.1|AF360262_1 putative flavonol
           glucosyltransferase [Arabidopsis thaliana]
           gi|14532902|gb|AAK64133.1| putative flavonol
           glucosyltransferase [Arabidopsis thaliana]
           gi|21537114|gb|AAM61455.1| putative flavonol
           glucosyltransferase [Arabidopsis thaliana]
          Length = 480

 Score =  172 bits (436), Expect = 3e-42
 Identities = 79/122 (64%), Positives = 103/122 (83%)
 Frame = -3

Query: 641 APQAKVLSHASIGGFLSHCGWNSVLESVANGVPLVAWPLYAEQRMNAVLVTEDVKVALRP 462
           APQA+VL+H S GGFL+HCGWNS LESV +G+PL+AWPLYAEQ+MNAVL++ED++ ALRP
Sbjct: 347 APQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 406

Query: 461 KVGENGLVELVEIARVVRTLMQGEEGKKLRCKMKDLKEAAATTLKENGSSTNQIFQLALK 282
           + G++GLV   E+ARVV+ LM+GEEGK +R KMK+LKEAA   LK++G+ST  +  +ALK
Sbjct: 407 RAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALK 466

Query: 281 WK 276
           WK
Sbjct: 467 WK 468

>pir||T01732 UTP-glucose glucosyltransferase homolog A_IG002N01.15 - Arabidopsis
           thaliana gi|2191136|gb|AAB61023.1| Similar to
           UTP-Glucose Glucosyltransferase; coded for by A.
           thaliana cDNA T46230; coded for by A. thaliana cDNA
           H76538; coded for by A. thaliana cDNA H76290
           [Arabidopsis thaliana]
          Length = 462

 Score =  172 bits (436), Expect = 3e-42
 Identities = 79/122 (64%), Positives = 103/122 (83%)
 Frame = -3

Query: 641 APQAKVLSHASIGGFLSHCGWNSVLESVANGVPLVAWPLYAEQRMNAVLVTEDVKVALRP 462
           APQA+VL+H S GGFL+HCGWNS LESV +G+PL+AWPLYAEQ+MNAVL++ED++ ALRP
Sbjct: 329 APQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 388

Query: 461 KVGENGLVELVEIARVVRTLMQGEEGKKLRCKMKDLKEAAATTLKENGSSTNQIFQLALK 282
           + G++GLV   E+ARVV+ LM+GEEGK +R KMK+LKEAA   LK++G+ST  +  +ALK
Sbjct: 389 RAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALK 448

Query: 281 WK 276
           WK
Sbjct: 449 WK 450

>dbj|BAB86931.1| glucosyltransferase-13 [Vigna angularis]
          Length = 559

 Score =  162 bits (410), Expect = 4e-39
 Identities = 74/122 (60%), Positives = 101/122 (82%)
 Frame = -3

Query: 641 APQAKVLSHASIGGFLSHCGWNSVLESVANGVPLVAWPLYAEQRMNAVLVTEDVKVALRP 462
           APQ +VL+H+SIGGFL+HCGWNSVLESV NGVPL+ WPL+AEQRMNAV+++E +KV +RP
Sbjct: 435 APQIQVLAHSSIGGFLTHCGWNSVLESVMNGVPLITWPLFAEQRMNAVVLSEGLKVGVRP 494

Query: 461 KVGENGLVELVEIARVVRTLMQGEEGKKLRCKMKDLKEAAATTLKENGSSTNQIFQLALK 282
           +V ENGLVE VEI +V++ LM+ EEG ++  +M++LK+AA+  LK +GSST  + +L  K
Sbjct: 495 RVSENGLVERVEIVKVIKCLMEEEEGGEMHKRMEELKQAASNALKADGSSTKTLSELVQK 554

Query: 281 WK 276
           W+
Sbjct: 555 WE 556

>ref|NP_171649.1| flavonol 3-o-glucosyltransferase, putative; protein id: At1g01420.1
           [Arabidopsis thaliana] gi|25286824|pir||G86144
           hypothetical protein F6F3.22 [imported] - Arabidopsis
           thaliana gi|9665137|gb|AAF97321.1|AC023628_2 Similar to
           UTP-glucose glucosyltransferases [Arabidopsis thaliana]
          Length = 481

 Score =  155 bits (391), Expect = 6e-37
 Identities = 72/122 (59%), Positives = 99/122 (81%)
 Frame = -3

Query: 641 APQAKVLSHASIGGFLSHCGWNSVLESVANGVPLVAWPLYAEQRMNAVLVTEDVKVALRP 462
           APQA++L+H SIGGFL+HCGWNS LES+ NGVPL+AWPLYAEQ+MNA+L+  DV  ALR 
Sbjct: 347 APQAQILTHTSIGGFLTHCGWNSSLESIVNGVPLIAWPLYAEQKMNALLLV-DVGAALRA 405

Query: 461 KVGENGLVELVEIARVVRTLMQGEEGKKLRCKMKDLKEAAATTLKENGSSTNQIFQLALK 282
           ++GE+G+V   E+ARVV+ L++GEEG  +R KMK+LKE +   L+++G ST  + +++LK
Sbjct: 406 RLGEDGVVGREEVARVVKGLIEGEEGNAVRKKMKELKEGSVRVLRDDGFSTKSLNEVSLK 465

Query: 281 WK 276
           WK
Sbjct: 466 WK 467

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 547,366,214
Number of Sequences: 1393205
Number of extensions: 12163515
Number of successful extensions: 68764
Number of sequences better than 10.0: 900
Number of HSP's better than 10.0 without gapping: 56219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65584
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 GENf031c03 BP059655 1 351
2 MR040g10_f BP079116 34 426
3 MR006f01_f BP076411 39 421
4 GENf098b04 BP062333 64 194
5 MR044h12_f BP079447 65 542
6 GNf003a04 BP067556 66 280
7 MWM140f05_f AV766919 106 513
8 MF061a11_f BP031502 109 645




Lotus japonicus
Kazusa DNA Research Institute