Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002016A_C01 KMC002016A_c01
(780 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180632.1| putative protein kinase; protein id: At2g30740.... 236 3e-61
pir||F86201 probable protein kinase [imported] - Arabidopsis tha... 235 5e-61
ref|NP_172155.1| protein kinase interactor, putative; protein id... 235 5e-61
gb|AAF24808.1|AC007592_1 F12K11.1 [Arabidopsis thaliana] 235 5e-61
pir||F84863 probable protein kinase [imported] - Arabidopsis tha... 234 1e-60
>ref|NP_180632.1| putative protein kinase; protein id: At2g30740.1 [Arabidopsis
thaliana] gi|25287590|pir||B84712 probable protein
kinase [imported] - Arabidopsis thaliana
gi|2880051|gb|AAC02745.1| putative protein kinase
[Arabidopsis thaliana] gi|13374083|emb|CAC34450.1|
putative PTI1-like protein tyrosine kinase [Arabidopsis
thaliana]
Length = 366
Score = 236 bits (602), Expect = 3e-61
Identities = 119/131 (90%), Positives = 121/131 (91%)
Frame = -1
Query: 780 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 601
ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV
Sbjct: 233 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 292
Query: 600 TWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKATGNH 421
TWATPRLSEDKVKQCVDPKLKGEYPPK VAKLAAVAALCVQYE+EFRPNMSIVVKA
Sbjct: 293 TWATPRLSEDKVKQCVDPKLKGEYPPKSVAKLAAVAALCVQYESEFRPNMSIVVKAL-QP 351
Query: 420 F*RPPLAAAAP 388
+PP A AP
Sbjct: 352 LLKPPAPAPAP 362
>pir||F86201 probable protein kinase [imported] - Arabidopsis thaliana
gi|7523708|gb|AAF63147.1|AC011001_17 Putative protein
kinase [Arabidopsis thaliana]
Length = 377
Score = 235 bits (600), Expect = 5e-61
Identities = 118/131 (90%), Positives = 121/131 (92%)
Frame = -1
Query: 780 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 601
ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV
Sbjct: 246 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 305
Query: 600 TWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKATGNH 421
TWATPRLSEDKVKQC+DPKLK +YPPK VAKLAAVAALCVQYEAEFRPNMSIVVKA
Sbjct: 306 TWATPRLSEDKVKQCIDPKLKADYPPKAVAKLAAVAALCVQYEAEFRPNMSIVVKAL-QP 364
Query: 420 F*RPPLAAAAP 388
+PP AA AP
Sbjct: 365 LLKPPAAAPAP 375
>ref|NP_172155.1| protein kinase interactor, putative; protein id: At1g06700.1,
supported by cDNA: gi_13877994 [Arabidopsis thaliana]
gi|23297211|gb|AAN12919.1| putative kinase interactor
[Arabidopsis thaliana]
Length = 361
Score = 235 bits (600), Expect = 5e-61
Identities = 118/131 (90%), Positives = 121/131 (92%)
Frame = -1
Query: 780 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 601
ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV
Sbjct: 230 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 289
Query: 600 TWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKATGNH 421
TWATPRLSEDKVKQC+DPKLK +YPPK VAKLAAVAALCVQYEAEFRPNMSIVVKA
Sbjct: 290 TWATPRLSEDKVKQCIDPKLKADYPPKAVAKLAAVAALCVQYEAEFRPNMSIVVKAL-QP 348
Query: 420 F*RPPLAAAAP 388
+PP AA AP
Sbjct: 349 LLKPPAAAPAP 359
>gb|AAF24808.1|AC007592_1 F12K11.1 [Arabidopsis thaliana]
Length = 246
Score = 235 bits (600), Expect = 5e-61
Identities = 118/131 (90%), Positives = 121/131 (92%)
Frame = -1
Query: 780 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 601
ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV
Sbjct: 115 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 174
Query: 600 TWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKATGNH 421
TWATPRLSEDKVKQC+DPKLK +YPPK VAKLAAVAALCVQYEAEFRPNMSIVVKA
Sbjct: 175 TWATPRLSEDKVKQCIDPKLKADYPPKAVAKLAAVAALCVQYEAEFRPNMSIVVKAL-QP 233
Query: 420 F*RPPLAAAAP 388
+PP AA AP
Sbjct: 234 LLKPPAAAPAP 244
>pir||F84863 probable protein kinase [imported] - Arabidopsis thaliana
Length = 367
Score = 234 bits (597), Expect = 1e-60
Identities = 120/131 (91%), Positives = 120/131 (91%)
Frame = -1
Query: 780 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 601
ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV
Sbjct: 234 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV 293
Query: 600 TWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKATGNH 421
TWATPRLSEDKVKQCVDPKLKGEYPPK VAKLAAVAALCVQYEAEFRPNMSIVVKA
Sbjct: 294 TWATPRLSEDKVKQCVDPKLKGEYPPKAVAKLAAVAALCVQYEAEFRPNMSIVVKAL-QP 352
Query: 420 F*RPPLAAAAP 388
R AAA P
Sbjct: 353 LLRSATAAAPP 363
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 726,482,705
Number of Sequences: 1393205
Number of extensions: 16998166
Number of successful extensions: 65284
Number of sequences better than 10.0: 3147
Number of HSP's better than 10.0 without gapping: 58229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64185
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38655378996
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
