>KMC002015A_C02 KMC002015A_c02
gacctaagtatgacatttttaactGTAGAAGGGGCATCCCAGTCATTTAATGGAGGGTAC
AACCGGGAGAAAACGTTCATAACTCTCTCACATTGGAATAGAAATAAGGAGAAGTCAGAA
TGATTTGATCTCACATTACATATACACATAGAATAAGAGGTTTGAATCAAAATTAAAATA
ATGCAATGAAGTGACATTTTTAAATCATTATCAGAACAGTCAAGAGTCTTCCTCTCATAG
CAACTCTCAAGCAATTGGCAAACAAGCTCTCTCGCTGCATACATCATTCAATATTATAAA
ACAGTAACAAACTTAGAGATTCAGAAACTTAGATTTAGTTGATGCCTTTGACCAAAAAAA
AAAAGATTTAGTTGATGCCCAACTCTACAGCAACAGGGTGTTCTGGTTGGAGATTCAATG
CCCAAACTCTACAGCAACAGGGTTTCTGGTGGGACAGGCAGCCATCTTTATAAGAAAGGC
AATGTCATCCTTCGATAGTGTCTTTTTCTTAAGTAGAGCACGGGCAACCAAAAGGTAGCT
TGGGCTTTATGAACGATAATCAACTCTTTCGCCATGTTCCAGGCTTCATCAAGTAAAAAG
TTAACCTCCTCATCTATTTCATACCTTGTCCTATGACTTAATTTCAGATGGGACAAGTTT
TCAAAATCAAAATATGCAGGCCCAAATCCAGCGCTCATACCATACATCGCAACAATATCT
CTTGCTATAATTCTTGCTTCATGAAAGTCTCCAGAAGCTCCTGTACATACAAACTCAGGA
CCAAGAATCTCCCCCTCTGCACTCGAAGCAGCCATACTTATAACCATTTCATCGATCAAT
TTCTT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002015A_C02 KMC002015A_c02
         (845 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB91902.1| putative FtsH protease [Oryza sativa (japonica c...    62  1e-08
dbj|BAB91903.1| putative FtsH protease [Oryza sativa (japonica c...    61  2e-08
ref|NP_073127.1| cell division protein (ftsH) [Mycoplasma genita...    60  4e-08
ref|ZP_00072536.1| hypothetical protein [Trichodesmium erythraeu...    59  7e-08
ref|NP_602769.1| Cell division protein ftsH [Fusobacterium nucle...    59  7e-08

>dbj|BAB91902.1| putative FtsH protease [Oryza sativa (japonica cultivar-group)]
          Length = 709

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 37/102 (36%), Positives = 57/102 (55%)
 Frame = -1

Query: 845 KKLIDEMVISMAASSAEGEILGPEFVCTGASGDFHEARIIARDIVAMYGMSAGFGPAYFD 666
           K+++  + +SMA   AE  I G   V +GAS DF  A  +AR +V  YGMS   G   ++
Sbjct: 528 KQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKYGMSKQLGFVSYN 587

Query: 665 FENLSHLKLSHRTRYEIDEEVNFLLDEAWNMAKELIIVHKAQ 540
           +E+     +S  TR  I++EV  LL+ A+N AK ++  H  +
Sbjct: 588 YED-DGKSMSTETRLLIEQEVKSLLENAYNNAKTILTKHSKE 628

>dbj|BAB91903.1| putative FtsH protease [Oryza sativa (japonica cultivar-group)]
          Length = 715

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%)
 Frame = -1

Query: 845 KKLIDEMVISMAASSAEGEILGPEFVCTGASGDFHEARIIARDIVAMYGMSAGFGPAYFD 666
           K+++  + + M    AE  I G   V +GAS DF +A  +AR +V  YGMS   G   ++
Sbjct: 535 KQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAMVTKYGMSKQLGFVSYN 594

Query: 665 FENLSHLKLSHRTRYEIDEEVNFLLDEAWNMAKELIIVHKAQ 540
           +E+     +S  TR  I++EV   ++ A+N AK ++I H  +
Sbjct: 595 YED-DGKSMSTETRLLIEKEVKCFVENAYNNAKNILIKHNKE 635

>ref|NP_073127.1| cell division protein (ftsH) [Mycoplasma genitalium]
           gi|1346047|sp|P47695|FTSH_MYCGE Cell division protein
           ftsH homolog gi|1361466|pir||E64250 cell division
           protein ftsH - Mycoplasma genitalium
           gi|3845051|gb|AAC72477.1| cell division protein (ftsH)
           [Mycoplasma genitalium]
          Length = 702

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
 Frame = -1

Query: 839 LIDEMVISMAASSAEGEILGPEFVCTGASGDFHEARIIARDIVAMYGMSAGFGPAYFDFE 660
           L+  +  +M   +AE EI G   + TGAS DF++A  IAR +V   GMS      Y   +
Sbjct: 542 LLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMSKLGQVQYVPSQ 601

Query: 659 NL--SHLKL-SHRTRYEIDEEVNFLLDEAWNMAKELIIVHKAQATFWLPVLYLRKRHYRR 489
               S++KL S +T  +ID E+NF+++E +  AK +I  ++ +    +  L + +    +
Sbjct: 602 GTLPSNVKLYSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAET-ILK 660

Query: 488 MTLPFL*RWLPVPPETLL 435
             + F+ +   +PPE LL
Sbjct: 661 SDIDFIHKNTKLPPEILL 678

>ref|ZP_00072536.1| hypothetical protein [Trichodesmium erythraeum IMS101]
          Length = 613

 Score = 59.3 bits (142), Expect = 7e-08
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
 Frame = -1

Query: 839 LIDEMVISMAASSAEGEILGPEFVCTGASGDFHEARIIARDIVAMYGMSAGFGPAYFDFE 660
           L ++M +++    AE  + G E V TGAS D  +   +AR +V  +GMS   GP     +
Sbjct: 471 LQNQMAVALGGRLAEEIVFGDEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQ 530

Query: 659 N---------LSHLKLSHRTRYEIDEEVNFLLDEAWNMAKELII 555
           N         +S    S  T   ID+EV+ L+D+A+  AKE+++
Sbjct: 531 NGNMFLGRDIMSERDFSEETAAAIDDEVSNLVDQAYRRAKEVLV 574

>ref|NP_602769.1| Cell division protein ftsH [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586] gi|19713237|gb|AAL94068.1| Cell
           division protein ftsH [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 714

 Score = 59.3 bits (142), Expect = 7e-08
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
 Frame = -1

Query: 845 KKLIDEMVISMAASSAEGEILGPEFVCTGASGDFHEARIIARDIVAMYGMSAGFGPAYFD 666
           K ++D +       +AE  I G E +  GA  D + A +IA+DIV  YGM+  FGP + +
Sbjct: 581 KYMLDRIARYFGGRAAEEIIFGKENITDGAGSDIYYATLIAKDIVTKYGMTEKFGPVFLE 640

Query: 665 FEN----LSHLKLSHRTRYEIDEEVNFLLDEAWNMAKELIIVHK 546
                  L     S +T  E+D+E+  ++ E ++ AK +++ ++
Sbjct: 641 ATEEDYMLQRKYYSEQTGKEVDDEIRKIITEQYSRAKNILLENR 684

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 697,782,364
Number of Sequences: 1393205
Number of extensions: 14632627
Number of successful extensions: 33540
Number of sequences better than 10.0: 244
Number of HSP's better than 10.0 without gapping: 32321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33479
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 44316199683
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MR083h05_f BP082423 1 389 2 MFB100e01_f BP041264 23 579 3 MR036d02_f BP078779 47 538 4 MFB011a04_f BP034680 83 669 5 MPDL019b05_f AV777446 89 572 6 MFB048c01_f BP037472 108 569 7 MR040d02_f BP079087 117 523 8 SPD100b11_f BP051962 128 675 9 SPD093a10_f BP051394 128 662 10 MR029f11_f BP078261 128 546 11 MFB017f03_f BP035196 129 735 12 MR052b03_f BP079993 135 398 13 MR011f08_f BP076808 136 549 14 SPD066a10_f BP049239 136 717 15 MR027d02_f BP078070 138 590 16 GNf097e10 BP074566 144 584 17 SPD025d04_f BP045969 152 660 18 SPD054a04_f BP048272 152 493 19 MR059a12_f BP080500 164 456 20 SPD100f05_f BP051994 164 748 21 MR099f05_f BP083599 166 578 22 MR008f04_f BP076569 166 599 23 MR029g06_f BP078264 166 569 24 MR067g04_f BP081180 166 580 25 MR091d12_f BP083005 166 563 26 SPD066h05_f BP049305 167 792 27 MR041h01_f BP079199 172 588 28 MR040b08_f BP079072 172 671 29 MR042h10_f BP079292 172 286 30 MR056f06_f BP080323 172 722 31 MR084c10_f BP082456 172 550 32 MPD010b12_f AV770644 173 662 33 SPDL091c04_f BP057695 176 667 34 MPD051a09_f AV773440 177 668 35 MR092c09_f BP083069 177 564 36 MR055c07_f BP080227 177 593 37 MPD073f05_f AV774797 178 670 38 GNf062h11 BP072017 178 596 39 MR029c01_f BP078221 178 589 40 GNf091c12 BP074077 178 593 41 MPD086d12_f AV775647 179 653 42 MPD077e06_f AV775065 185 764 43 MR050e03_f BP079875 185 611 44 SPD063h09_f BP049064 186 772 45 GENf067b06 BP061219 186 573 46 GENf086a03 BP061980 186 699 47 MFB010f06_f BP034651 187 711 48 SPD001h10_f BP044114 187 494 49 SPD081h10_f BP050507 189 751 50 MR085b05_f BP082519 189 755 51 MFB019c09_f BP035329 190 633 52 SPD014f09_f BP045131 190 560 53 MFB034a05_f BP036463 191 675 54 MPD087c06_f AV775704 194 750 55 SPD065e11_f BP049198 197 309 56 MR091f08_f BP083020 197 693 57 MR092g11_f BP083110 197 276 58 SPD035c04_f BP046771 197 696 59 SPD070d08_f BP049599 197 697 60 MR021h06_f BP077631 197 620 61 MFB007f03_f BP034427 197 802 62 MR023c08_f BP077740 197 587 63 MR092h08_f BP083116 197 604 64 MFB016b06_f BP035082 197 675 65 MR043f04_f BP079340 197 612 66 MFBL031e11_f BP042814 197 702 67 MR005c01_f BP076296 197 635 68 SPD098a04_f BP051794 197 790 69 MR050c03_f BP079855 197 594 70 MR083e07_f BP082394 197 560 71 SPD042b09_f BP047321 197 548 72 MFBL028d09_f BP042661 198 662 73 SPD091h03_f BP051302 201 673 74 MFB088d02_f BP040417 202 757 75 SPD098f08_f BP051843 202 791 76 MR099a08_f BP083553 202 603 77 SPD034h09_f BP046745 202 675 78 SPD080b06_f BP050367 203 696 79 MR081g02_f BP082253 203 614 80 MR014d05_f BP077027 203 705 81 MFB070d05_f BP039085 203 796 82 MFB094g10_f BP040877 203 772 83 MR094a12_f BP083202 204 589 84 MR080h09_f BP082190 204 677 85 MR017e04_f BP077279 204 552 86 SPD053a05_f BP048199 206 664 87 MPDL092e03_f AV781313 207 320 88 MR059b03_f BP080503 208 607 89 SPD038f03_f BP047036 209 796 90 MR079e06_f BP082087 209 696 91 SPD098e07_f BP051834 210 812 92 MFB041e01_f BP036988 210 723 93 SPDL097e09_f BP058103 210 816 94 SPD003f01_f BP044248 211 811 95 MFB034a09_f BP036467 213 718 96 SPDL002b08_f BP052093 214 728 97 SPD035f05_f BP046799 215 798 98 SPDL085b09_f BP057311 215 749 99 MR055e06_f BP080244 218 636 100 MFB063b09_f BP038548 220 807 101 MFB097f10_f BP041082 220 752 102 MR009a12_f BP076599 226 655 103 MR020a09_f BP077487 235 434 104 MR053f12_f BP080103 235 576 105 MR013d04_f BP076946 235 727 106 MR093b10_f BP083137 235 642 107 MWM163b09_f AV767254 235 690 108 MR026e11_f BP078006 236 484 109 MPDL034f07_f AV778195 236 810 110 MFB069f02_f BP039024 249 802 111 SPD043a11_f BP047398 249 759 112 MPD094e12_f AV776170 266 749 113 MFB011e09_f BP034725 274 700 114 MR002h01_f BP076110 287 684 115 GENf030h11 BP059639 288 814 116 SPD075g03_f BP050020 293 896

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