Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002014A_C01 KMC002014A_c01
(653 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568304.1| L-aspartate oxidase -like protein; protein id: ... 123 2e-27
pir||T51421 L-aspartate oxidase-like protein - Arabidopsis thali... 123 2e-27
ref|NP_661461.1| L-aspartate oxidase [Chlorobium tepidum TLS] gi... 56 5e-07
gb|ZP_00096561.1| hypothetical protein [Novosphingobium aromatic... 54 1e-06
ref|NP_520568.1| PROBABLE L-ASPARTATE OXIDASE (QUINOLINATE SYNTH... 54 2e-06
>ref|NP_568304.1| L-aspartate oxidase -like protein; protein id: At5g14760.1,
supported by cDNA: gi_15010649 [Arabidopsis thaliana]
gi|15010650|gb|AAK73984.1| AT5g14760/T9L3_60
[Arabidopsis thaliana] gi|24111279|gb|AAN46763.1|
At5g14760/T9L3_60 [Arabidopsis thaliana]
Length = 651
Score = 123 bits (309), Expect = 2e-27
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = -2
Query: 652 KWEEYLFQHGWKPTMVAPEICEMRNLFCCAKLVVSSALSRHESRGLHYTIDFPYLEESER 473
KWE +LF+HGW+ T+VA E CEMRNLFCCAKLVVSSAL+RHESRGLHY DFP++EES+R
Sbjct: 561 KWETFLFEHGWEQTVVALEACEMRNLFCCAKLVVSSALARHESRGLHYMTDFPFVEESKR 620
Query: 472 LPTIIFPSSRVKSTRSFRQL 413
+PTII PSS ++ S R+L
Sbjct: 621 IPTIILPSSPTTASWSSRRL 640
>pir||T51421 L-aspartate oxidase-like protein - Arabidopsis thaliana
gi|9755744|emb|CAC01875.1| L-aspartate oxidase-like
protein [Arabidopsis thaliana]
Length = 642
Score = 123 bits (309), Expect = 2e-27
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = -2
Query: 652 KWEEYLFQHGWKPTMVAPEICEMRNLFCCAKLVVSSALSRHESRGLHYTIDFPYLEESER 473
KWE +LF+HGW+ T+VA E CEMRNLFCCAKLVVSSAL+RHESRGLHY DFP++EES+R
Sbjct: 552 KWETFLFEHGWEQTVVALEACEMRNLFCCAKLVVSSALARHESRGLHYMTDFPFVEESKR 611
Query: 472 LPTIIFPSSRVKSTRSFRQL 413
+PTII PSS ++ S R+L
Sbjct: 612 IPTIILPSSPTTASWSSRRL 631
>ref|NP_661461.1| L-aspartate oxidase [Chlorobium tepidum TLS]
gi|21646494|gb|AAM71803.1| L-aspartate oxidase
[Chlorobium tepidum TLS]
Length = 531
Score = 55.8 bits (133), Expect = 5e-07
Identities = 24/58 (41%), Positives = 35/58 (59%)
Frame = -2
Query: 622 WKPTMVAPEICEMRNLFCCAKLVVSSALSRHESRGLHYTIDFPYLEESERLPTIIFPS 449
+K T + P+I E+RN+ A L++ A+ R ESRGLHYT DFP ++ L + S
Sbjct: 473 YKKTKITPQIIELRNIIKVASLIIQGAIKRRESRGLHYTTDFPQKDDKHYLADTVLRS 530
>gb|ZP_00096561.1| hypothetical protein [Novosphingobium aromaticivorans]
Length = 540
Score = 54.3 bits (129), Expect = 1e-06
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -2
Query: 607 VAPEICEMRNLFCCAKLVVSSALSRHESRGLHYTIDFPYLEESERLPTIIFP 452
V ++ E+RNL A+L+V SA +RHESRGLHYT+D+P E R T++ P
Sbjct: 490 VTTDLIELRNLLQSAELIVRSARARHESRGLHYTLDYPQTNEVAR-DTVLVP 540
>ref|NP_520568.1| PROBABLE L-ASPARTATE OXIDASE (QUINOLINATE SYNTHETASE B)
OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum]
gi|22653858|sp|Q8XWM7|NAB1_RALSO L-aspartate oxidase 1
(LASPO 1) (Quinolinate synthetase B 1)
gi|17429468|emb|CAD16154.1| PROBABLE L-ASPARTATE OXIDASE
(QUINOLINATE SYNTHETASE B) OXIDOREDUCTASE PROTEIN
[Ralstonia solanacearum]
Length = 533
Score = 53.9 bits (128), Expect = 2e-06
Identities = 28/60 (46%), Positives = 41/60 (67%)
Frame = -2
Query: 607 VAPEICEMRNLFCCAKLVVSSALSRHESRGLHYTIDFPYLEESERLPTIIFPSSRVKSTR 428
V+ ++ E+RNL A L+V SALSRHESRGLH++ D+P + LPT++ P+ R S +
Sbjct: 474 VSHDLLELRNLVEAASLIVDSALSRHESRGLHFSRDYPQ-TLPKALPTVMQPAHRRTSRK 532
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 572,591,543
Number of Sequences: 1393205
Number of extensions: 12336980
Number of successful extensions: 34051
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 33140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34035
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 28144814643
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
