Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002002A_C01 KMC002002A_c01
(979 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187740.1| integral membrane protein, putative; protein id... 175 1e-42
ref|NP_196201.1| phosphate/phosphoenolpyruvate translocator prot... 171 2e-41
gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocat... 163 3e-39
ref|NP_172712.1| hypothetical protein; protein id: At1g12500.1 [... 123 5e-27
gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like p... 120 3e-26
>ref|NP_187740.1| integral membrane protein, putative; protein id: At3g11320.1
[Arabidopsis thaliana]
gi|12321869|gb|AAG50965.1|AC073395_7 integral membrane
protein, putative; 85705-84183 [Arabidopsis thaliana]
Length = 344
Score = 175 bits (443), Expect = 1e-42
Identities = 88/98 (89%), Positives = 95/98 (96%)
Frame = -2
Query: 978 MEENVVGITLALARDDVKIIWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 799
ME+NVVGIT+ALARDD +I+WYLLFNS LAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA
Sbjct: 247 MEKNVVGITIALARDDFRIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 306
Query: 798 VVVSILIFKNPVSVTGMMGYALTVFGVILYSEAKKRSK 685
VVVSILIF+NPVSVTGM+GY+LTV GVILYSEAKKRSK
Sbjct: 307 VVVSILIFRNPVSVTGMLGYSLTVCGVILYSEAKKRSK 344
>ref|NP_196201.1| phosphate/phosphoenolpyruvate translocator protein-like; protein
id: At5g05820.1 [Arabidopsis thaliana]
gi|9759107|dbj|BAB09676.1| phosphate/phosphoenolpyruvate
translocator protein-like [Arabidopsis thaliana]
Length = 307
Score = 171 bits (432), Expect = 2e-41
Identities = 86/98 (87%), Positives = 93/98 (94%)
Frame = -2
Query: 978 MEENVVGITLALARDDVKIIWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 799
ME+NVVGIT+ALARDD +I+WYLLFNS LAY VNLTNFLVT HTSALTLQVLGNAKGAVA
Sbjct: 209 MEKNVVGITIALARDDFRIVWYLLFNSALAYLVNLTNFLVTNHTSALTLQVLGNAKGAVA 268
Query: 798 VVVSILIFKNPVSVTGMMGYALTVFGVILYSEAKKRSK 685
VVVSILIFKNPVSVTGM+GY+LTV GVILYSEAKKR+K
Sbjct: 269 VVVSILIFKNPVSVTGMLGYSLTVCGVILYSEAKKRNK 306
>gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocator protein [Oryza
sativa (japonica cultivar-group)]
Length = 322
Score = 163 bits (413), Expect = 3e-39
Identities = 82/98 (83%), Positives = 90/98 (91%)
Frame = -2
Query: 978 MEENVVGITLALARDDVKIIWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 799
ME+NVVGIT+ LA+ D I+W LLFNS LAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA
Sbjct: 224 MEDNVVGITIELAKKDTTIVWLLLFNSCLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 283
Query: 798 VVVSILIFKNPVSVTGMMGYALTVFGVILYSEAKKRSK 685
VVVSILIF+NPVSVTGM+GY LTV GVILYSE+KKR+K
Sbjct: 284 VVVSILIFRNPVSVTGMLGYTLTVIGVILYSESKKRNK 321
>ref|NP_172712.1| hypothetical protein; protein id: At1g12500.1 [Arabidopsis
thaliana] gi|8778643|gb|AAF79651.1|AC025416_25 F5O11.25
[Arabidopsis thaliana]
gi|9502394|gb|AAF88101.1|AC025417_29 T12C24.5
[Arabidopsis thaliana] gi|26449593|dbj|BAC41922.1|
unknown protein [Arabidopsis thaliana]
Length = 361
Score = 123 bits (308), Expect = 5e-27
Identities = 62/98 (63%), Positives = 78/98 (79%)
Frame = -2
Query: 978 MEENVVGITLALARDDVKIIWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 799
+E NV+ + + AR D II+ L N+T+AY VNLTNFLVTKHTSALTLQVLGN K AVA
Sbjct: 259 IEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFLVTKHTSALTLQVLGNGKAAVA 318
Query: 798 VVVSILIFKNPVSVTGMMGYALTVFGVILYSEAKKRSK 685
VS+LIF+NPV+V G+ G+ +T+ GV+LYSEA+KRSK
Sbjct: 319 AGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSK 356
>gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana] gi|20259810|gb|AAM13252.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana]
Length = 309
Score = 120 bits (301), Expect = 3e-26
Identities = 61/96 (63%), Positives = 75/96 (77%)
Frame = -2
Query: 978 MEENVVGITLALARDDVKIIWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 799
ME +V+ +TL LA+ + LL NS +AY NL NFLVTKHTSALTLQVLGNAKGAVA
Sbjct: 212 MEPDVISVTLTLAKQHQYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVA 271
Query: 798 VVVSILIFKNPVSVTGMMGYALTVFGVILYSEAKKR 691
VV+SILIF+NPV+V G+ GY++TV GV+ Y E K+R
Sbjct: 272 VVISILIFQNPVTVMGIGGYSITVLGVVAYGETKRR 307
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 752,915,259
Number of Sequences: 1393205
Number of extensions: 15140357
Number of successful extensions: 32251
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 30174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32238
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 56019656464
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
