>KMC001981A_C01 KMC001981A_c01
AAACTATAAACTATCAAGTATTACTGCAAATACCAGAAAATTCATTACACTGAATTTCAA
AACTACATCAACAAGAGTGACTGACTTTAAGATCAAACACACCCATCTAAGAAACACAAA
TTTGCTACTTATTTCATATGCATTCTAACTTCAAACACTAGATTTTGAAGTGCTCCCTAC
CAATCAGAGTATAAGAACCCCTGAATTTACATCATAACTAGACCCATACAAACGCACTCA
CTAACCTTACCTATAAACTGACACAAAGCCACCCTTTTCAGAAACCAAATAGTTACAATC
TTTGATATTCCTACAAGCCTTGCTTTGCTCTTCAGCCTTCGAATTTTCCATCACTTTCTT
CACTCGTGCCCAACGGCAATCCTCTTGATAGAAAAATCAAAGGAAGCCAGTGACACTCTG
TGACAAGATCAAACAGTTTTCCCAAGAAAGTAGCCAACAGTTCCTCGCGTCTCACACGCA
ATCCATCATCATCATCAACAGTGAAATCCAGAGAACAGAACCAACCAATCCATCATCATC
GTCTAATTCACCACGCGCAGCAACT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001981A_C01 KMC001981A_c01
         (565 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T46869 heme-binding protein [imported] - Synechocystis sp g...    34  1.4
ref|NP_440106.1| heme binding protein precursor [Synechocystis s...    34  1.4
gb|AAB09407.1| HEHBOX7                                                 33  1.9
ref|NP_570284.1| SPV124 hypothetical protein [Swinepox virus] gi...    32  4.2
gb|EAA19572.1| hypothetical protein [Plasmodium yoelii yoelii]         32  5.4

>pir||T46869 heme-binding protein [imported] - Synechocystis sp
           gi|1477447|emb|CAA65417.1| heme-binding protein
           [Synechocystis sp.]
          Length = 393

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 19/58 (32%), Positives = 29/58 (49%)
 Frame = +1

Query: 232 THSLTLPIN*HKATLFRNQIVTIFDIPTSLALLFSLRIFHHFLHSCPTAILLIEKSKE 405
           T    LP N H   +F      I  +P  L  LF L IF++F    PT++ ++EK ++
Sbjct: 342 TSHFGLPENRHAVYIF------IATVPVFLDSLFKLLIFNYFTRQSPTSVAILEKMQQ 393

>ref|NP_440106.1| heme binding protein precursor [Synechocystis sp. PCC 6803]
           gi|14285377|sp|P72771|CEMA_SYNY3 CemA-like protein
           sll1685 gi|7469333|pir||S74634 heme binding protein
           precursor ycf10 - Synechocystis sp.  (strain PCC 6803)
           gi|1651859|dbj|BAA16786.1| heme binding protein
           precursor [Synechocystis sp. PCC 6803]
          Length = 393

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 19/58 (32%), Positives = 29/58 (49%)
 Frame = +1

Query: 232 THSLTLPIN*HKATLFRNQIVTIFDIPTSLALLFSLRIFHHFLHSCPTAILLIEKSKE 405
           T    LP N H   +F      I  +P  L  LF L IF++F    PT++ ++EK ++
Sbjct: 342 TSHFGLPENRHAVYIF------IATVPVFLDSLFKLLIFNYFTRQSPTSVAILEKMQQ 393

>gb|AAB09407.1| HEHBOX7
          Length = 158

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 21/68 (30%), Positives = 32/68 (46%), Gaps = 12/68 (17%)
 Frame = +3

Query: 387 DRKIKGSQ*HSVTRSNSFPKKVANSSSRLTRNPSSSSTVKSRE------------QNQPI 530
           +R++K  + +   ++ S  KK A  SS  T + SS+S+  S              Q QP 
Sbjct: 66  NRRMKMKKLNEKEKTQSAKKKTAEGSSSHTSSTSSNSSTSSTSTASTMSQSSSSHQQQPH 125

Query: 531 HHHRLIHH 554
           HHH+  HH
Sbjct: 126 HHHQHHHH 133

>ref|NP_570284.1| SPV124 hypothetical protein [Swinepox virus]
           gi|18448617|gb|AAL69863.1| SPV124 hypothetical protein
           [Swinepox virus]
          Length = 280

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 5   YKLSSITANTRKFITLNFKTTSTRVTDFKIKHTHLRNTNLLL 130
           Y +S++   T   ITL+    S R+ D KIK+ H  N+  LL
Sbjct: 129 YSISNVNRGTVTIITLDIDIPSMRIIDKKIKNIHYSNSLTLL 170

>gb|EAA19572.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 845

 Score = 32.0 bits (71), Expect = 5.4
 Identities = 16/48 (33%), Positives = 26/48 (53%)
 Frame = +2

Query: 2   NYKLSSITANTRKFITLNFKTTSTRVTDFKIKHTHLRNTNLLLISYAF 145
           N  L  I +N   +  +N+ TTS  + +  +K+  +   NLL +SYAF
Sbjct: 734 NNYLYKILSNLFSYFYINYDTTSNIILNRTLKNNSILKENLLNLSYAF 781

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,611,165
Number of Sequences: 1393205
Number of extensions: 8758898
Number of successful extensions: 26345
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 23953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25985
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MWM084d08_f AV766104 1 514 2 MFB094e07_f BP040857 1 493 3 MF079e03_f BP032476 21 571 4 GENf028e04 BP059537 28 371

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