Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001968A_C02 KMC001968A_c02
(1127 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA65771.1| ferritin [Medicago sativa] 279 4e-87
pir||T08123 ferritin 3 precursor - cowpea gi|2970652|gb|AAC06026... 270 4e-84
dbj|BAB60683.1| ferritin [Glycine max] 260 3e-80
sp|P19976|FRI_SOYBN Ferritin, chloroplast precursor (SOF-35) gi|... 253 4e-79
gb|AAA34016.1| ferritin light chain 251 2e-78
>emb|CAA65771.1| ferritin [Medicago sativa]
Length = 250
Score = 279 bits (714), Expect(2) = 4e-87
Identities = 150/204 (73%), Positives = 170/204 (82%), Gaps = 2/204 (0%)
Frame = -1
Query: 1052 MALSSSNVSVFSLSPVVGDVSKKLVSSSSSSSSMSFVPSSSSPCSQRRSLKV--SAVDAT 879
MALS+S VS+FS SP+VG SK SS + +P +R+++KV +A +A
Sbjct: 1 MALSASKVSIFSPSPIVGHFSKNTTFSSLN------LPMDGD---KRKNVKVHAAAANAP 51
Query: 878 VSLTGVIFQPFEEVKKEVLAVPIAPNVSLARQRFEDESEAAINEQINVEYNVSYVYHSLF 699
+LTGVIF+PFEEVKK+VLAVPIA NVSLARQ ++DE E+AINEQINVEYNVSYVYHSLF
Sbjct: 52 TALTGVIFEPFEEVKKDVLAVPIAHNVSLARQNYQDEVESAINEQINVEYNVSYVYHSLF 111
Query: 698 AYFDRDNIALKGLAKFFKESSDEERGHAEKLMKYQNIRGGRVVLHPIVSPLSEFAHVEKG 519
AYFDRDN+ALKGLAKFFKESS+EER HAEKLMKYQNIRGGRVVLHPIVSP SEF H EKG
Sbjct: 112 AYFDRDNVALKGLAKFFKESSEEEREHAEKLMKYQNIRGGRVVLHPIVSPPSEFDHAEKG 171
Query: 518 DALYAMELALSLEKLVNEKLLNLH 447
DALYAMELALSLEKLVNEKLLN+H
Sbjct: 172 DALYAMELALSLEKLVNEKLLNVH 195
Score = 65.9 bits (159), Expect(2) = 4e-87
Identities = 33/43 (76%), Positives = 36/43 (82%)
Frame = -2
Query: 445 SVADRNNDPQLADFIESEFLDEQVQSIKKISEYVNSAEISWKG 317
SVADRNNDPQLA+FIESEFL EQV+SIKKISEYV + KG
Sbjct: 196 SVADRNNDPQLANFIESEFLVEQVESIKKISEYVTQLRLVGKG 238
Score = 46.2 bits (108), Expect = 0.001
Identities = 20/44 (45%), Positives = 27/44 (60%)
Frame = -3
Query: 414 LQTSLRASFWMNRFNQLRRYQSM*TQLRLVGKGHGVWHFDPRLL 283
L + + F + + +++ TQLRLVGKGHGVWHFD LL
Sbjct: 206 LANFIESEFLVEQVESIKKISEYVTQLRLVGKGHGVWHFDQTLL 249
>pir||T08123 ferritin 3 precursor - cowpea gi|2970652|gb|AAC06026.1| ferritin
subunit cowpea3 precursor [Vigna unguiculata]
Length = 256
Score = 270 bits (690), Expect(2) = 4e-84
Identities = 150/206 (72%), Positives = 164/206 (78%), Gaps = 4/206 (1%)
Frame = -1
Query: 1052 MALSSSNVSVFSLSPVVG--DVSKKLVSSSSSSSSMSFVPSSSSPCSQRRSLKVSAV--D 885
MALS S V FSLS VVG D KKL SSSS S S S R+++V A +
Sbjct: 1 MALSCSKVLTFSLSSVVGGDDAKKKLSLCSSSSLSASVNGGGS------RNMRVCAAASN 54
Query: 884 ATVSLTGVIFQPFEEVKKEVLAVPIAPNVSLARQRFEDESEAAINEQINVEYNVSYVYHS 705
A LTGVIF+PF+E+KK+ LAVPIAPNVSL+RQ + DE+EAAINEQINVEYNVSYVYHS
Sbjct: 55 APAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHS 114
Query: 704 LFAYFDRDNIALKGLAKFFKESSDEERGHAEKLMKYQNIRGGRVVLHPIVSPLSEFAHVE 525
LFAYFDRDNIALKGLAKFFKESS+EER HAEKL+KYQNIRGGRVVLHPI SP SEF H E
Sbjct: 115 LFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPE 174
Query: 524 KGDALYAMELALSLEKLVNEKLLNLH 447
KGDALYAMELALSLEKL NEKLL +H
Sbjct: 175 KGDALYAMELALSLEKLTNEKLLYVH 200
Score = 65.1 bits (157), Expect(2) = 4e-84
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = -2
Query: 445 SVADRNNDPQLADFIESEFLDEQVQSIKKISEYVNSAEISWKG 317
SVADRNND QLADFIESEFL+EQV+SIKKI+EYV + KG
Sbjct: 201 SVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKG 243
Score = 47.4 bits (111), Expect = 4e-04
Identities = 20/42 (47%), Positives = 27/42 (63%)
Frame = -3
Query: 402 LRASFWMNRFNQLRRYQSM*TQLRLVGKGHGVWHFDPRLLEE 277
+ + F + +++ TQLRLVGKGHGVWHFD RLL +
Sbjct: 215 IESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256
>dbj|BAB60683.1| ferritin [Glycine max]
Length = 257
Score = 260 bits (665), Expect(2) = 3e-80
Identities = 143/204 (70%), Positives = 159/204 (77%), Gaps = 2/204 (0%)
Frame = -1
Query: 1052 MALSSSNVSVFSLSPVVG--DVSKKLVSSSSSSSSMSFVPSSSSPCSQRRSLKVSAVDAT 879
MALS S V F LSPVVG DV KKL SS F+ S R S +A +A
Sbjct: 1 MALSCSKVLSFYLSPVVGGGDVPKKLTFSS-------FLGLSKGVGGSRSSRVCAASNAP 53
Query: 878 VSLTGVIFQPFEEVKKEVLAVPIAPNVSLARQRFEDESEAAINEQINVEYNVSYVYHSLF 699
L GVIF+PF+E+KK+ LAVPIA NV LARQ + D+SE+AINEQINVEYNVSYVYH+LF
Sbjct: 54 APLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALF 113
Query: 698 AYFDRDNIALKGLAKFFKESSDEERGHAEKLMKYQNIRGGRVVLHPIVSPLSEFAHVEKG 519
AYFDRDNIALKGLAKFFKESS+EER HAE+L+KYQNIRGGRVVLHPI SP SEF H EKG
Sbjct: 114 AYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKG 173
Query: 518 DALYAMELALSLEKLVNEKLLNLH 447
DALYAMELALSLEKL NEKLL++H
Sbjct: 174 DALYAMELALSLEKLTNEKLLHVH 197
Score = 62.0 bits (149), Expect(2) = 3e-80
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -2
Query: 445 SVADRNNDPQLADFIESEFLDEQVQSIKKISEYVNSAEISWKG 317
SVA+RNNDPQ ADFIESEFL EQV+SIKKI+EYV + KG
Sbjct: 198 SVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKG 240
Score = 45.8 bits (107), Expect = 0.001
Identities = 19/45 (42%), Positives = 27/45 (59%)
Frame = -3
Query: 402 LRASFWMNRFNQLRRYQSM*TQLRLVGKGHGVWHFDPRLLEEGVH 268
+ + F + +++ QLRLVGKGHGVWHFD +LL + H
Sbjct: 212 IESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDEDH 256
>sp|P19976|FRI_SOYBN Ferritin, chloroplast precursor (SOF-35) gi|81773|pir||A40992
ferritin precursor - soybean gi|169953|gb|AAA33959.1|
ferritin light chain
Length = 250
Score = 253 bits (646), Expect(2) = 4e-79
Identities = 142/205 (69%), Positives = 157/205 (76%), Gaps = 3/205 (1%)
Frame = -1
Query: 1052 MALSSSNVSVFS---LSPVVGDVSKKLVSSSSSSSSMSFVPSSSSPCSQRRSLKVSAVDA 882
MAL+ S VS FS P VG K + + S S+SF+ R+L+V A +
Sbjct: 1 MALAPSKVSTFSGFSPKPSVGGAQK----NPTCSVSLSFLNEKLGS----RNLRVCA--S 50
Query: 881 TVSLTGVIFQPFEEVKKEVLAVPIAPNVSLARQRFEDESEAAINEQINVEYNVSYVYHSL 702
TV LTGVIF+PFEEVKK LAVP AP VSLARQ + DE E+AINEQINVEYN SYVYHSL
Sbjct: 51 TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSL 110
Query: 701 FAYFDRDNIALKGLAKFFKESSDEERGHAEKLMKYQNIRGGRVVLHPIVSPLSEFAHVEK 522
FAYFDRDN+ALKG AKFFKESS+EER HAEKLMKYQN RGGRVVLHPI + SEF HVEK
Sbjct: 111 FAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEK 170
Query: 521 GDALYAMELALSLEKLVNEKLLNLH 447
GDALYAMELALSLEKLVNEKLLN+H
Sbjct: 171 GDALYAMELALSLEKLVNEKLLNVH 195
Score = 65.5 bits (158), Expect(2) = 4e-79
Identities = 33/43 (76%), Positives = 35/43 (80%)
Frame = -2
Query: 445 SVADRNNDPQLADFIESEFLDEQVQSIKKISEYVNSAEISWKG 317
SVADRNNDPQ+ADFIESEFL EQV+SIKKISEYV KG
Sbjct: 196 SVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKG 238
Score = 43.9 bits (102), Expect = 0.005
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 402 LRASFWMNRFNQLRRYQSM*TQLRLVGKGHGVWHFDPRLLE 280
+ + F + +++ QLR VGKGHGVWHFD RLL+
Sbjct: 210 IESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLLD 250
>gb|AAA34016.1| ferritin light chain
Length = 250
Score = 251 bits (640), Expect(2) = 2e-78
Identities = 141/204 (69%), Positives = 156/204 (76%), Gaps = 3/204 (1%)
Frame = -1
Query: 1049 ALSSSNVSVFS---LSPVVGDVSKKLVSSSSSSSSMSFVPSSSSPCSQRRSLKVSAVDAT 879
AL+ S VS FS P VG K + + S S+SF+ R+L+V A +T
Sbjct: 2 ALAPSKVSTFSGFSPKPSVGGAQK----NPTCSVSLSFLNEKLGS----RNLRVCA--ST 51
Query: 878 VSLTGVIFQPFEEVKKEVLAVPIAPNVSLARQRFEDESEAAINEQINVEYNVSYVYHSLF 699
V LTGVIF+PFEEVKK LAVP AP VSLARQ + DE E+AINEQINVEYN SYVYHSLF
Sbjct: 52 VPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLF 111
Query: 698 AYFDRDNIALKGLAKFFKESSDEERGHAEKLMKYQNIRGGRVVLHPIVSPLSEFAHVEKG 519
AYFDRDN+ALKG AKFFKESS+EER HAEKLMKYQN RGGRVVLHPI + SEF HVEKG
Sbjct: 112 AYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKG 171
Query: 518 DALYAMELALSLEKLVNEKLLNLH 447
DALYAMELALSLEKLVNEKLLN+H
Sbjct: 172 DALYAMELALSLEKLVNEKLLNVH 195
Score = 65.5 bits (158), Expect(2) = 2e-78
Identities = 33/43 (76%), Positives = 35/43 (80%)
Frame = -2
Query: 445 SVADRNNDPQLADFIESEFLDEQVQSIKKISEYVNSAEISWKG 317
SVADRNNDPQ+ADFIESEFL EQV+SIKKISEYV KG
Sbjct: 196 SVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKG 238
Score = 43.9 bits (102), Expect = 0.005
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 402 LRASFWMNRFNQLRRYQSM*TQLRLVGKGHGVWHFDPRLLE 280
+ + F + +++ QLR VGKGHGVWHFD RLL+
Sbjct: 210 IESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLLD 250
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 979,619,490
Number of Sequences: 1393205
Number of extensions: 22632972
Number of successful extensions: 181436
Number of sequences better than 10.0: 1139
Number of HSP's better than 10.0 without gapping: 91908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141892
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 68634655500
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
