Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001960A_C01 KMC001960A_c01
(596 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK84889.1|AF402608_1 TGA-type basic leucine zipper protein T... 166 2e-40
gb|AAK84890.1|AF402609_1 TGA-type basic leucine zipper protein T... 159 3e-38
sp|O24160|TG21_TOBAC TGACG-sequence specific DNA-binding protein... 157 1e-37
gb|AAD34570.1|AF143442_1 NPR1-interactor protein 1 [Lycopersicon... 156 2e-37
gb|AAF06696.1|AF031487_1 bZIP transcription factor [Nicotiana ta... 152 2e-36
>gb|AAK84889.1|AF402608_1 TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris]
Length = 467
Score = 166 bits (421), Expect = 2e-40
Identities = 84/91 (92%), Positives = 88/91 (96%)
Frame = -3
Query: 594 SLSETLSTGSPGSSGSSGNVPNYMGQMAMXMGKLGTLEGFIRQADNLRQQTLQQIHRILT 415
SL+ETLSTG+P SSGSSGNV NYMGQMAM MGKLGTLEGFIRQADNLRQQTLQQ+HRILT
Sbjct: 377 SLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILT 436
Query: 414 TRQSARALLAINDYFSRLRALSSLWLARPRD 322
TRQSARALLAI+DYFSRLRALSSLWLARPRD
Sbjct: 437 TRQSARALLAIHDYFSRLRALSSLWLARPRD 467
>gb|AAK84890.1|AF402609_1 TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris]
Length = 460
Score = 159 bits (402), Expect = 3e-38
Identities = 81/91 (89%), Positives = 86/91 (94%)
Frame = -3
Query: 594 SLSETLSTGSPGSSGSSGNVPNYMGQMAMXMGKLGTLEGFIRQADNLRQQTLQQIHRILT 415
SLSETL+ GSP SSGSSGNV NYMGQMAM MGKLGTLEGF+RQADNLRQQTLQQ+ RILT
Sbjct: 370 SLSETLANGSPSSSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILT 429
Query: 414 TRQSARALLAINDYFSRLRALSSLWLARPRD 322
TRQSARALLAI+DYFSRLRALSSLWLARPR+
Sbjct: 430 TRQSARALLAISDYFSRLRALSSLWLARPRE 460
>sp|O24160|TG21_TOBAC TGACG-sequence specific DNA-binding protein TGA-2.1 (TGA2.1)
gi|7489164|pir||T03935 leucine zipper transcription
factor TGA2.1 - common tobacco gi|2281449|gb|AAB68661.1|
leucine zipper transcription factor TGA2.1 [Nicotiana
tabacum]
Length = 456
Score = 157 bits (396), Expect = 1e-37
Identities = 77/91 (84%), Positives = 85/91 (92%)
Frame = -3
Query: 594 SLSETLSTGSPGSSGSSGNVPNYMGQMAMXMGKLGTLEGFIRQADNLRQQTLQQIHRILT 415
SL+ETL+ GSP GSSG+V NYMGQMAM MGKLGTLEGF+RQADNLRQQTLQQ+HR+LT
Sbjct: 363 SLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRVLT 422
Query: 414 TRQSARALLAINDYFSRLRALSSLWLARPRD 322
TRQSARALLAIN+YFSRLRALSSLWLARPR+
Sbjct: 423 TRQSARALLAINEYFSRLRALSSLWLARPRE 453
>gb|AAD34570.1|AF143442_1 NPR1-interactor protein 1 [Lycopersicon esculentum]
Length = 237
Score = 156 bits (394), Expect = 2e-37
Identities = 77/91 (84%), Positives = 86/91 (93%)
Frame = -3
Query: 594 SLSETLSTGSPGSSGSSGNVPNYMGQMAMXMGKLGTLEGFIRQADNLRQQTLQQIHRILT 415
SL+ETL+ GSP + GSSG+V NYMGQMAM MGKLGTLEGF+RQADNLRQQTLQQ+HRILT
Sbjct: 146 SLAETLANGSPATEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILT 205
Query: 414 TRQSARALLAINDYFSRLRALSSLWLARPRD 322
TRQSARALLAI++YFSRLRALSSLWLARPR+
Sbjct: 206 TRQSARALLAISEYFSRLRALSSLWLARPRE 236
>gb|AAF06696.1|AF031487_1 bZIP transcription factor [Nicotiana tabacum]
Length = 325
Score = 152 bits (385), Expect = 2e-36
Identities = 80/91 (87%), Positives = 85/91 (92%)
Frame = -3
Query: 594 SLSETLSTGSPGSSGSSGNVPNYMGQMAMXMGKLGTLEGFIRQADNLRQQTLQQIHRILT 415
SL+ETL+ GS G S SSGNV NYMGQMAM MGKLGTLEGFIRQADNLRQQTLQQ+HRILT
Sbjct: 236 SLAETLA-GSLGPSSSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILT 294
Query: 414 TRQSARALLAINDYFSRLRALSSLWLARPRD 322
TRQSARALLAI+DYFSRLRALSSLWLARPR+
Sbjct: 295 TRQSARALLAISDYFSRLRALSSLWLARPRE 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 517,124,970
Number of Sequences: 1393205
Number of extensions: 10797680
Number of successful extensions: 23524
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 22538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23484
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
