Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001956A_C02 KMC001956A_c02
(645 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD31713.1| epoxide hydrolase [Cicer arietinum] 114 4e-35
emb|CAA55294.1| epoxide hydrolase [Glycine max] 116 4e-34
pir||T07145 epoxide hydrolase homolog - soybean gi|1304227|dbj|B... 116 4e-34
gb|AAM28292.1| epoxide hydrolase [Ananas comosus] 119 4e-34
gb|AAA81891.1| epoxide hydrolase 119 2e-33
>emb|CAD31713.1| epoxide hydrolase [Cicer arietinum]
Length = 275
Score = 114 bits (284), Expect(2) = 4e-35
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = -1
Query: 645 SWLSQQDLDYYVSQFNKTGFSGALNYYRNLNLNWELTAPWTGVPLTHVPVKFIVGDVDIA 466
SWL++ DL Y+VS+F KTGF+G LNYYRNLNLNWEL APW G + +VPVKFI G++D+
Sbjct: 163 SWLTEADLAYFVSKFEKTGFTGGLNYYRNLNLNWELMAPWRGAKV-YVPVKFITGELDMV 221
Query: 465 YHFSGMKEYIPHGGFKKDVP 406
Y MKEYI GGFK+DVP
Sbjct: 222 YTSLNMKEYIHGGGFKEDVP 241
Score = 56.2 bits (134), Expect(2) = 4e-35
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = -2
Query: 401 LEEVVVPEGVAHFNHPEAAEDVSHHIYDFIKKF 303
LEEV+V +GVAHFN+ EAAE++S+HIY+FIKKF
Sbjct: 243 LEEVIVQKGVAHFNNQEAAEEISNHIYEFIKKF 275
>emb|CAA55294.1| epoxide hydrolase [Glycine max]
Length = 341
Score = 116 bits (290), Expect(2) = 4e-34
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = -1
Query: 645 SWLSQQDLDYYVSQFNKTGFSGALNYYRNLNLNWELTAPWTGVPLTHVPVKFIVGDVDIA 466
SWL+++DL YYVS+F KTGF+G LNYYRN NLNWELTAPWTG + VPVK+I G++D+
Sbjct: 229 SWLTEEDLAYYVSKFEKTGFTGPLNYYRNFNLNWELTAPWTGGQI-KVPVKYITGELDMV 287
Query: 465 YHFSGMKEYIPHGGFKKDVP 406
Y+ +KEYI GGFK+DVP
Sbjct: 288 YNSLNLKEYIHGGGFKQDVP 307
Score = 50.8 bits (120), Expect(2) = 4e-34
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = -2
Query: 401 LEEVVVPEGVAHFNHPEAAEDVSHHIYDFIKKF 303
LE+V+V +GVAHFN+ EAAE++ ++IYDFI KF
Sbjct: 309 LEQVIVQKGVAHFNNQEAAEEIDNYIYDFINKF 341
>pir||T07145 epoxide hydrolase homolog - soybean gi|1304227|dbj|BAA09852.1|
Epoxide hydrolase [Glycine max]
gi|2764804|emb|CAA55293.1| epoxide hydrolase [Glycine
max]
Length = 341
Score = 116 bits (290), Expect(2) = 4e-34
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = -1
Query: 645 SWLSQQDLDYYVSQFNKTGFSGALNYYRNLNLNWELTAPWTGVPLTHVPVKFIVGDVDIA 466
SWL+++DL YYVS+F KTGF+G LNYYRN NLNWELTAPWTG + VPVK+I G++D+
Sbjct: 229 SWLTEEDLAYYVSKFEKTGFTGPLNYYRNFNLNWELTAPWTGGQI-KVPVKYITGELDMV 287
Query: 465 YHFSGMKEYIPHGGFKKDVP 406
Y+ +KEYI GGFK+DVP
Sbjct: 288 YNSLNLKEYIHGGGFKQDVP 307
Score = 50.8 bits (120), Expect(2) = 4e-34
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = -2
Query: 401 LEEVVVPEGVAHFNHPEAAEDVSHHIYDFIKKF 303
LE+V+V +GVAHFN+ EAAE++ ++IYDFI KF
Sbjct: 309 LEQVIVQKGVAHFNNQEAAEEIDNYIYDFINKF 341
>gb|AAM28292.1| epoxide hydrolase [Ananas comosus]
Length = 318
Score = 119 bits (297), Expect(2) = 4e-34
Identities = 50/80 (62%), Positives = 64/80 (79%)
Frame = -1
Query: 645 SWLSQQDLDYYVSQFNKTGFSGALNYYRNLNLNWELTAPWTGVPLTHVPVKFIVGDVDIA 466
SWLS++DLDYY S+F KTGF+G +NYYR +NLNWELTAPW G + VP KFIVGD+D+
Sbjct: 206 SWLSEEDLDYYASKFEKTGFTGGMNYYRCMNLNWELTAPWAGAKI-QVPTKFIVGDLDLT 264
Query: 465 YHFSGMKEYIPHGGFKKDVP 406
YH+ +++YI GGFK +VP
Sbjct: 265 YHYPNIQDYIHKGGFKNEVP 284
Score = 48.1 bits (113), Expect(2) = 4e-34
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -2
Query: 401 LEEVVVPEGVAHFNHPEAAEDVSHHIYDFIKKF 303
LEEVVV EGV HF E AE+V+ HIY+FIKKF
Sbjct: 286 LEEVVVLEGVGHFIQQERAEEVTDHIYNFIKKF 318
>gb|AAA81891.1| epoxide hydrolase
Length = 321
Score = 119 bits (297), Expect(2) = 2e-33
Identities = 51/80 (63%), Positives = 65/80 (80%)
Frame = -1
Query: 645 SWLSQQDLDYYVSQFNKTGFSGALNYYRNLNLNWELTAPWTGVPLTHVPVKFIVGDVDIA 466
SWLS+++LDYY ++F +TGF+G +NYYR L++NWELTAPWTG + VP KFIVG+ D+
Sbjct: 209 SWLSEEELDYYANKFEQTGFTGGVNYYRALSINWELTAPWTGAQV-KVPTKFIVGEFDLV 267
Query: 465 YHFSGMKEYIPHGGFKKDVP 406
YH G KEYI +GGFKKDVP
Sbjct: 268 YHIPGAKEYIHNGGFKKDVP 287
Score = 45.8 bits (107), Expect(2) = 2e-33
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = -2
Query: 401 LEEVVVPEGVAHFNHPEAAEDVSHHIYDFIKKF 303
LEEVVV EG AHF + E ++S HIYDFI+KF
Sbjct: 289 LEEVVVLEGAAHFVNQERPHEISKHIYDFIQKF 321
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 569,549,538
Number of Sequences: 1393205
Number of extensions: 13147381
Number of successful extensions: 36114
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 34504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36077
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
