Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001952A_C01 KMC001952A_c01
(696 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL66290.1|AF452450_1 adenosine 5'-phosphosulfate reductase [... 127 1e-28
gb|AAB05871.2| PAPS-reductase-like protein [Catharanthus roseus] 124 1e-27
pir||T10065 phosphoadenylyl-sulfate reductase (thioredoxin) (EC ... 121 1e-26
gb|AAB57688.1| APS reductase [Arabidopsis thaliana] gi|21617937|... 117 2e-25
gb|AAC49563.1| PRH43 [Arabidopsis thaliana] 117 2e-25
>gb|AAL66290.1|AF452450_1 adenosine 5'-phosphosulfate reductase [Glycine max]
Length = 470
Score = 127 bits (320), Expect = 1e-28
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = -3
Query: 694 MEESYVDLADKLAESGVKVGKFRADGEQKEFAKRELGLGSFPTIMFFPKHSSRPIKYPSE 515
MEESYVDLA+KLA SGVKV KFRADG+QKE+AK EL LGSFPTI+ FPKHSS+PIKYPSE
Sbjct: 396 MEESYVDLAEKLAGSGVKVAKFRADGDQKEYAKTELQLGSFPTILLFPKHSSQPIKYPSE 455
Query: 514 NRDVDSLMAFVNALR 470
RDVDSL AFVNALR
Sbjct: 456 KRDVDSLTAFVNALR 470
>gb|AAB05871.2| PAPS-reductase-like protein [Catharanthus roseus]
Length = 464
Score = 124 bits (311), Expect = 1e-27
Identities = 60/75 (80%), Positives = 69/75 (92%)
Frame = -3
Query: 694 MEESYVDLADKLAESGVKVGKFRADGEQKEFAKRELGLGSFPTIMFFPKHSSRPIKYPSE 515
ME SY++LA+KLA SGVKVGKF+ADG+QK FA++EL L SFPTI+FFPKHSS+PIKYPSE
Sbjct: 390 MEGSYLELAEKLAGSGVKVGKFKADGDQKAFAQQELQLNSFPTILFFPKHSSKPIKYPSE 449
Query: 514 NRDVDSLMAFVNALR 470
RDVDSLMAFVNALR
Sbjct: 450 KRDVDSLMAFVNALR 464
>pir||T10065 phosphoadenylyl-sulfate reductase (thioredoxin) (EC 1.8.4.8)
precursor, chloroplast - Madagascar periwinkle
Length = 463
Score = 121 bits (303), Expect = 1e-26
Identities = 59/75 (78%), Positives = 68/75 (90%)
Frame = -3
Query: 694 MEESYVDLADKLAESGVKVGKFRADGEQKEFAKRELGLGSFPTIMFFPKHSSRPIKYPSE 515
ME SY++LA+KLA SGVKVGKF+ADG+QK FA++EL L S PTI+FFPKHSS+PIKYPSE
Sbjct: 389 MEGSYLELAEKLAGSGVKVGKFKADGDQKAFAQQELQLNSSPTILFFPKHSSKPIKYPSE 448
Query: 514 NRDVDSLMAFVNALR 470
RDVDSLMAFVNALR
Sbjct: 449 KRDVDSLMAFVNALR 463
>gb|AAB57688.1| APS reductase [Arabidopsis thaliana] gi|21617937|gb|AAM66987.1|
5'-adenylylphosphosulfate reductase, putative
[Arabidopsis thaliana]
Length = 455
Score = 117 bits (293), Expect = 2e-25
Identities = 58/75 (77%), Positives = 65/75 (86%)
Frame = -3
Query: 694 MEESYVDLADKLAESGVKVGKFRADGEQKEFAKRELGLGSFPTIMFFPKHSSRPIKYPSE 515
ME SYV+LA+KLA GVKV KFRADGEQKEFAK+EL LGSFPTI+ FPK + R IKYPSE
Sbjct: 381 MEASYVELAEKLAGKGVKVAKFRADGEQKEFAKQELQLGSFPTILLFPKRAPRAIKYPSE 440
Query: 514 NRDVDSLMAFVNALR 470
+RDVDSLM+FVN LR
Sbjct: 441 HRDVDSLMSFVNLLR 455
>gb|AAC49563.1| PRH43 [Arabidopsis thaliana]
Length = 453
Score = 117 bits (292), Expect = 2e-25
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = -3
Query: 694 MEESYVDLADKLAESGVKVGKFRADGEQKEFAKRELGLGSFPTIMFFPKHSSRPIKYPSE 515
ME SY++LA+KLA GVKV KFRADGEQKEFAK+EL LGSFPTI+ FPK + R IKYPSE
Sbjct: 379 MEASYIELAEKLAGKGVKVAKFRADGEQKEFAKQELQLGSFPTILLFPKRAPRAIKYPSE 438
Query: 514 NRDVDSLMAFVNALR 470
+RDVDSLM+FVN LR
Sbjct: 439 HRDVDSLMSFVNLLR 453
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 609,148,164
Number of Sequences: 1393205
Number of extensions: 13430720
Number of successful extensions: 39462
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 37944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39441
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31684559424
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
