Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001935A_C01 KMC001935A_c01
(630 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK92213.1| bZIP transcription factor BZI-2 [Nicotiana tabacum] 122 3e-27
gb|AAN61914.1|AF430372_1 bZIP transcription factor [Capsicum chi... 117 1e-25
gb|AAD21199.1| putative bZIP DNA-binding protein [Capsicum chine... 117 2e-25
emb|CAA68078.1| bZIP transcription factor [Arabidopsis thaliana]... 110 2e-23
gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max] 109 3e-23
>gb|AAK92213.1| bZIP transcription factor BZI-2 [Nicotiana tabacum]
Length = 170
Score = 122 bits (307), Expect = 3e-27
Identities = 70/132 (53%), Positives = 91/132 (68%), Gaps = 15/132 (11%)
Frame = -1
Query: 630 RESARRSRMRKQEHLEGMSAQVEQLKKENNQISTNIGVTTQMYLNVEAENAILRVQMAEL 451
RESARRSRMRKQ+HL+ + AQV L+KENNQI T++ VTTQ YLNVEAEN+ILR Q+AEL
Sbjct: 40 RESARRSRMRKQKHLDDLMAQVATLRKENNQILTSMNVTTQHYLNVEAENSILRAQLAEL 99
Query: 450 SNRLQSLNEIIHYIESSNN--------------YLFHEAQ-ETQFNDCGFMDTWNSLAVN 316
++RL+SLNEII +++++NN Y F+ AQ E + ++WN L N
Sbjct: 100 NHRLESLNEIIAFLDANNNCNGLANMDHNQEEPYSFNFAQNEPMVDGFNMTNSWNYLCAN 159
Query: 315 QSIMAAADMLMY 280
Q IM AD+L Y
Sbjct: 160 QPIM-TADVLQY 170
>gb|AAN61914.1|AF430372_1 bZIP transcription factor [Capsicum chinense]
Length = 170
Score = 117 bits (294), Expect = 1e-25
Identities = 66/127 (51%), Positives = 87/127 (67%), Gaps = 16/127 (12%)
Frame = -1
Query: 630 RESARRSRMRKQEHLEGMSAQVEQLKKENNQISTNIGVTTQMYLNVEAENAILRVQMAEL 451
RESARRSRMRKQ+HL+ + AQV L+KEN+QI T++ VTTQ YLNVEAEN+ILR Q++EL
Sbjct: 39 RESARRSRMRKQKHLDDLMAQVSTLRKENDQILTSMNVTTQHYLNVEAENSILRAQLSEL 98
Query: 450 SNRLQSLNEIIHYIESSNN---------------YLFHEAQ-ETQFNDCGFMDTWNSLAV 319
S+RL+SLNEII Y++++NN Y F+ AQ +T + ++WN
Sbjct: 99 SHRLESLNEIIAYMDANNNNNSCSNGLAMDHNEPYSFNFAQSDTVVDGFNMTNSWNYFCS 158
Query: 318 NQSIMAA 298
NQ IM A
Sbjct: 159 NQPIMTA 165
>gb|AAD21199.1| putative bZIP DNA-binding protein [Capsicum chinense]
Length = 167
Score = 117 bits (292), Expect = 2e-25
Identities = 65/124 (52%), Positives = 87/124 (69%), Gaps = 13/124 (10%)
Frame = -1
Query: 630 RESARRSRMRKQEHLEGMSAQVEQLKKENNQISTNIGVTTQMYLNVEAENAILRVQMAEL 451
RESARRSRMRKQ+HL+ + AQV L+KEN+QI T++ VTTQ YLNVEAEN+ILR Q++EL
Sbjct: 39 RESARRSRMRKQKHLDDLMAQVSTLRKENDQILTSMNVTTQHYLNVEAENSILRAQLSEL 98
Query: 450 SNRLQSLNEIIHYIESSNN------------YLFHEAQ-ETQFNDCGFMDTWNSLAVNQS 310
S+RL+SLNEII Y++++N+ Y F+ AQ +T + ++WN NQ
Sbjct: 99 SHRLESLNEIIAYMDANNSCSNGLAMDHNEPYSFNFAQSDTVVDGFNMTNSWNYFCSNQP 158
Query: 309 IMAA 298
IM A
Sbjct: 159 IMTA 162
>emb|CAA68078.1| bZIP transcription factor [Arabidopsis thaliana]
gi|1865679|emb|CAB04795.1| ATB2 [Arabidopsis thaliana]
gi|10443483|gb|AAG17475.1|AF053940_1 transcription
factor GBF6 [Arabidopsis thaliana]
Length = 160
Score = 110 bits (274), Expect = 2e-23
Identities = 62/125 (49%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
Frame = -1
Query: 630 RESARRSRMRKQEHLEGMSAQVEQLKKENNQISTNIGVTTQMYLNVEAENAILRVQMAEL 451
RESARRSRM+KQ+ L+ ++AQV LKKEN +I T++ +TTQ YL VEAEN++LR Q+ EL
Sbjct: 36 RESARRSRMKKQKLLDDLTAQVNHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDEL 95
Query: 450 SNRLQSLNEIIHYIESSNNYLFHEAQETQFN-------DCGFMDTWN-SLAVNQSIMAAA 295
++RLQSLN+II +++SSNN + N D F++ N S +NQ +MA++
Sbjct: 96 NHRLQSLNDIIEFLDSSNNNNNNNNMGMCSNPLVGLECDDFFVNQMNMSYIMNQPLMASS 155
Query: 294 DMLMY 280
D LMY
Sbjct: 156 DALMY 160
>gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max]
Length = 166
Score = 109 bits (273), Expect = 3e-23
Identities = 60/126 (47%), Positives = 83/126 (65%), Gaps = 9/126 (7%)
Frame = -1
Query: 630 RESARRSRMRKQEHLEGMSAQVEQLKKENNQISTNIGVTTQMYLNVEAENAILRVQMAEL 451
RESARRSRMRKQ+HL+ + +QV QL+KEN QI T++ +TTQ YL+VEAEN++LR Q+ EL
Sbjct: 41 RESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGEL 100
Query: 450 SNRLQSLNEIIHYIESSN---------NYLFHEAQETQFNDCGFMDTWNSLAVNQSIMAA 298
S+RL+SLNEI+ + ++ + F E N + N +NQ IMA+
Sbjct: 101 SHRLESLNEIVDVLNATTTVAGFGAAASSTFVEPMNNNNNSFFNFNPLNMGYLNQPIMAS 160
Query: 297 ADMLMY 280
AD+L Y
Sbjct: 161 ADILQY 166
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 527,882,157
Number of Sequences: 1393205
Number of extensions: 11168663
Number of successful extensions: 33367
Number of sequences better than 10.0: 272
Number of HSP's better than 10.0 without gapping: 30863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33308
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
