Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001933A_C02 KMC001933A_c02
(674 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177122.2| acid phosphatase, putative; protein id: At1g696... 219 3e-56
pir||B96718 probable sterol desaturase T6C23.16 [imported] - Ara... 219 3e-56
ref|NP_563944.1| acid phosphatase, putative; protein id: At1g142... 208 6e-53
pir||A86277 F14L17.5 protein - Arabidopsis thaliana gi|7262670|g... 208 6e-53
dbj|BAC22345.1| similar to acid phosphatase [Oryza sativa (japon... 188 7e-47
>ref|NP_177122.2| acid phosphatase, putative; protein id: At1g69640.1, supported by
cDNA: gi_17979534 [Arabidopsis thaliana]
gi|17979535|gb|AAL50102.1| At1g69640/F24J1.22
[Arabidopsis thaliana] gi|23505995|gb|AAN28857.1|
At1g69640/F24J1.22 [Arabidopsis thaliana]
Length = 260
Score = 219 bits (557), Expect = 3e-56
Identities = 98/116 (84%), Positives = 106/116 (90%)
Frame = -3
Query: 651 NHPVEGLLNDTVGGALSFLISGMSARASIFFFSFATIKTVDDHCGLWLPGNLFQMFFQNN 472
NHPVEGLL DT+GGALSFL+SGMS R SIFFFSFATIKTVDDHCGLWLPGNLF M F+NN
Sbjct: 145 NHPVEGLLLDTIGGALSFLVSGMSPRTSIFFFSFATIKTVDDHCGLWLPGNLFHMVFKNN 204
Query: 471 CAYHDVHHQLYGNKYNFSQPFFVMWDRILGTYMPYRLEKREGGGFESRPCKDYKDE 304
AYHD+HHQLYG KYNFSQPFFVMWDRILGTYMPY LEKRE GGFE+RP K++KD+
Sbjct: 205 SAYHDIHHQLYGTKYNFSQPFFVMWDRILGTYMPYSLEKREDGGFEARPTKEFKDD 260
>pir||B96718 probable sterol desaturase T6C23.16 [imported] - Arabidopsis
thaliana gi|10092291|gb|AAG12703.1|AC021046_4 acid
phosphatase, putative; 5376-6903 [Arabidopsis thaliana]
gi|12325199|gb|AAG52550.1|AC013289_17 putative sterol
desaturase; 75442-76969 [Arabidopsis thaliana]
Length = 258
Score = 219 bits (557), Expect = 3e-56
Identities = 98/116 (84%), Positives = 106/116 (90%)
Frame = -3
Query: 651 NHPVEGLLNDTVGGALSFLISGMSARASIFFFSFATIKTVDDHCGLWLPGNLFQMFFQNN 472
NHPVEGLL DT+GGALSFL+SGMS R SIFFFSFATIKTVDDHCGLWLPGNLF M F+NN
Sbjct: 143 NHPVEGLLLDTIGGALSFLVSGMSPRTSIFFFSFATIKTVDDHCGLWLPGNLFHMVFKNN 202
Query: 471 CAYHDVHHQLYGNKYNFSQPFFVMWDRILGTYMPYRLEKREGGGFESRPCKDYKDE 304
AYHD+HHQLYG KYNFSQPFFVMWDRILGTYMPY LEKRE GGFE+RP K++KD+
Sbjct: 203 SAYHDIHHQLYGTKYNFSQPFFVMWDRILGTYMPYSLEKREDGGFEARPTKEFKDD 258
>ref|NP_563944.1| acid phosphatase, putative; protein id: At1g14290.1, supported by
cDNA: gi_13605749 [Arabidopsis thaliana]
gi|13605750|gb|AAK32868.1|AF361856_1 At1g14290/F14L17_4
[Arabidopsis thaliana] gi|24797014|gb|AAN64519.1|
At1g14290/F14L17_4 [Arabidopsis thaliana]
Length = 259
Score = 208 bits (529), Expect = 6e-53
Identities = 95/116 (81%), Positives = 101/116 (86%)
Frame = -3
Query: 651 NHPVEGLLNDTVGGALSFLISGMSARASIFFFSFATIKTVDDHCGLWLPGNLFQMFFQNN 472
NHP+EGLL DT+GGALSFL SGMS R +IFFFSFATIKTVDDHCGLWLPGN F +FF NN
Sbjct: 144 NHPLEGLLLDTIGGALSFLFSGMSPRTAIFFFSFATIKTVDDHCGLWLPGNPFHIFFSNN 203
Query: 471 CAYHDVHHQLYGNKYNFSQPFFVMWDRILGTYMPYRLEKREGGGFESRPCKDYKDE 304
AYHDVHHQLYG KYNFSQPFFVMWDRILGTY+PY LEKR GGFE+RP K KDE
Sbjct: 204 SAYHDVHHQLYGTKYNFSQPFFVMWDRILGTYLPYSLEKRANGGFETRPIKVSKDE 259
>pir||A86277 F14L17.5 protein - Arabidopsis thaliana
gi|7262670|gb|AAF43928.1|AC012188_5 Contains similarity
to acid phosphatase from Lupinus albus gb|AB023385 and
contains a Sterol desaturase PF|01598 domain. EST
gb|AI995340 comes from this gene. [Arabidopsis thaliana]
Length = 258
Score = 208 bits (529), Expect = 6e-53
Identities = 95/116 (81%), Positives = 101/116 (86%)
Frame = -3
Query: 651 NHPVEGLLNDTVGGALSFLISGMSARASIFFFSFATIKTVDDHCGLWLPGNLFQMFFQNN 472
NHP+EGLL DT+GGALSFL SGMS R +IFFFSFATIKTVDDHCGLWLPGN F +FF NN
Sbjct: 143 NHPLEGLLLDTIGGALSFLFSGMSPRTAIFFFSFATIKTVDDHCGLWLPGNPFHIFFSNN 202
Query: 471 CAYHDVHHQLYGNKYNFSQPFFVMWDRILGTYMPYRLEKREGGGFESRPCKDYKDE 304
AYHDVHHQLYG KYNFSQPFFVMWDRILGTY+PY LEKR GGFE+RP K KDE
Sbjct: 203 SAYHDVHHQLYGTKYNFSQPFFVMWDRILGTYLPYSLEKRANGGFETRPIKVSKDE 258
>dbj|BAC22345.1| similar to acid phosphatase [Oryza sativa (japonica
cultivar-group)]
Length = 246
Score = 188 bits (477), Expect = 7e-47
Identities = 82/112 (73%), Positives = 97/112 (86%)
Frame = -3
Query: 651 NHPVEGLLNDTVGGALSFLISGMSARASIFFFSFATIKTVDDHCGLWLPGNLFQMFFQNN 472
NHP+EGLL DTVGGA+SFL+SGM+ R S+FFF FA +KTVDDHCGLWLP N+FQ FQNN
Sbjct: 135 NHPLEGLLLDTVGGAISFLVSGMTPRTSVFFFCFAVLKTVDDHCGLWLPYNIFQSLFQNN 194
Query: 471 CAYHDVHHQLYGNKYNFSQPFFVMWDRILGTYMPYRLEKREGGGFESRPCKD 316
AYHDVHHQL G+KYN+SQPFF +WDRILGT+MPY L +R+ GGFE+RP +D
Sbjct: 195 TAYHDVHHQLQGSKYNYSQPFFSIWDRILGTHMPYNLVRRKEGGFEARPLRD 246
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 628,716,921
Number of Sequences: 1393205
Number of extensions: 14788008
Number of successful extensions: 37118
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 35769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37089
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29704274460
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
