Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001929A_C02 KMC001929A_c02
(568 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO13838.1|AF405326_1 peroxidase 2 [Lupinus albus] 163 2e-39
gb|AAD37428.1|AF149278_1 peroxidase 3 precursor [Phaseolus vulga... 151 6e-36
dbj|BAA82306.1| peroxidase [Nicotiana tabacum] 133 1e-30
gb|AAL93151.1|AF485265_1 gaiacol peroxidase [Gossypium hirsutum] 131 7e-30
gb|AAA96137.1| peroxidase 131 7e-30
>gb|AAO13838.1|AF405326_1 peroxidase 2 [Lupinus albus]
Length = 260
Score = 163 bits (412), Expect = 2e-39
Identities = 78/89 (87%), Positives = 82/89 (91%)
Frame = -3
Query: 566 RDNNVAVLDFKTPNXFDNLYYKNLINKKGLLHSDQVLFSGGSTDSLVRTYSNNQKAFEND 387
+DNNVAVLDFKTP FDNLYYKNLINKKGLLHSDQ LF+GGSTDSLV TYSNN+KAF +D
Sbjct: 172 KDNNVAVLDFKTPTHFDNLYYKNLINKKGLLHSDQELFNGGSTDSLVTTYSNNEKAFNSD 231
Query: 386 FVNAMIKMGNNKPLTGSNGQIRKHCRRAN 300
FV AMIKMGN KPLTGSNGQIRKHCRRAN
Sbjct: 232 FVTAMIKMGNIKPLTGSNGQIRKHCRRAN 260
>gb|AAD37428.1|AF149278_1 peroxidase 3 precursor [Phaseolus vulgaris]
Length = 324
Score = 151 bits (381), Expect = 6e-36
Identities = 73/89 (82%), Positives = 79/89 (88%)
Frame = -3
Query: 566 RDNNVAVLDFKTPNXFDNLYYKNLINKKGLLHSDQVLFSGGSTDSLVRTYSNNQKAFEND 387
+DNNVA L+FKTPN FDN YYKNLINKKGLLHSDQVLF GGSTDSLVR YSN+Q+AFE+D
Sbjct: 236 KDNNVAPLEFKTPNHFDNNYYKNLINKKGLLHSDQVLFDGGSTDSLVRAYSNDQRAFESD 295
Query: 386 FVNAMIKMGNNKPLTGSNGQIRKHCRRAN 300
FV AMIKMGN KPLTGSNGQIR+ C R N
Sbjct: 296 FVTAMIKMGNIKPLTGSNGQIRRLCGRPN 324
>dbj|BAA82306.1| peroxidase [Nicotiana tabacum]
Length = 321
Score = 133 bits (335), Expect = 1e-30
Identities = 61/88 (69%), Positives = 75/88 (84%)
Frame = -3
Query: 563 DNNVAVLDFKTPNXFDNLYYKNLINKKGLLHSDQVLFSGGSTDSLVRTYSNNQKAFENDF 384
DNN+A LD +TPN FDN Y+KNL++KKGLLHSDQ LF+GGS DS+V +YSNN +F +DF
Sbjct: 234 DNNLAPLDLQTPNKFDNNYFKNLVDKKGLLHSDQQLFNGGSADSIVTSYSNNPSSFSSDF 293
Query: 383 VNAMIKMGNNKPLTGSNGQIRKHCRRAN 300
V AMIKMG+ +PLTGSNG+IRK+CRR N
Sbjct: 294 VTAMIKMGDIRPLTGSNGEIRKNCRRLN 321
>gb|AAL93151.1|AF485265_1 gaiacol peroxidase [Gossypium hirsutum]
Length = 320
Score = 131 bits (329), Expect = 7e-30
Identities = 61/88 (69%), Positives = 75/88 (84%)
Frame = -3
Query: 563 DNNVAVLDFKTPNXFDNLYYKNLINKKGLLHSDQVLFSGGSTDSLVRTYSNNQKAFENDF 384
DNN+A LD TPN FD+ Y++NL+NKKGLLHSDQ LF+GGSTDSLV+TYS+N K F +DF
Sbjct: 233 DNNLAPLDLATPNSFDSKYFENLLNKKGLLHSDQELFNGGSTDSLVKTYSSNVKKFYSDF 292
Query: 383 VNAMIKMGNNKPLTGSNGQIRKHCRRAN 300
+ AMIKMG+ KPLTGSNG+IRK+C + N
Sbjct: 293 IAAMIKMGDIKPLTGSNGEIRKNCGKPN 320
>gb|AAA96137.1| peroxidase
Length = 136
Score = 131 bits (329), Expect = 7e-30
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = -3
Query: 563 DNNVAVLDFKTPNXFDNLYYKNLINKKGLLHSDQVLFSGGSTDSLVRTYSNNQKAFENDF 384
D+N+A LD +TP F+N YYKNLINKKGLLHSDQ LF+GGSTDSLV+TYS N KAF +DF
Sbjct: 49 DSNLAPLDLQTPTHFENNYYKNLINKKGLLHSDQELFNGGSTDSLVQTYSKNNKAFTSDF 108
Query: 383 VNAMIKMGNNKPLTGSNGQIRKHCRRAN 300
V MIKMG+ PLTGS G+IRK+CRR N
Sbjct: 109 VPGMIKMGDLLPLTGSKGEIRKNCRRMN 136
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 487,971,661
Number of Sequences: 1393205
Number of extensions: 10824399
Number of successful extensions: 23230
Number of sequences better than 10.0: 449
Number of HSP's better than 10.0 without gapping: 22169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23028
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
