Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001926A_C01 KMC001926A_c01
(594 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P52178|CPT2_BRAOL Triose phosphate/phosphate translocator, no... 147 1e-34
pir||T03836 phosphate/phosphoenolpyruvate translocator TABPPT10 ... 146 2e-34
gb|AAM63308.1| phosphate/phosphoenolpyruvate translocator precur... 144 8e-34
gb|AAF63704.1|AF209210_1 phosphate/phosphoenolpyruvate transloca... 144 8e-34
gb|AAB40646.1| phosphate/phosphoenolpyruvate translocator precur... 144 8e-34
>sp|P52178|CPT2_BRAOL Triose phosphate/phosphate translocator, non-green plastid,
chloroplast precursor (CTPT) gi|7488568|pir||T14438
phosphate/triose-phosphate translocator precursor,
non-green plastid - wild cabbage
gi|1143713|gb|AAA84892.1| non-green plastid
phosphate/triose-phosphate translocator precursor
Length = 402
Score = 147 bits (370), Expect = 1e-34
Identities = 72/82 (87%), Positives = 77/82 (93%)
Frame = -1
Query: 594 QLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNA 415
Q+Y +SL+AALCFHAYQQVSYMIL RVSPVTHSVGNCVKRVVVIVSSVIFF+TPVSPVNA
Sbjct: 317 QIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNA 376
Query: 414 MGTALALTGVFLYSRVKRIKPK 349
GT +AL GVFLYSRVKRIKPK
Sbjct: 377 FGTGIALAGVFLYSRVKRIKPK 398
>pir||T03836 phosphate/phosphoenolpyruvate translocator TABPPT10 precursor,
plastid - common tobacco gi|1778145|gb|AAB40648.1|
phosphate/phosphoenolpyruvate translocator precursor
Length = 411
Score = 146 bits (369), Expect = 2e-34
Identities = 70/82 (85%), Positives = 78/82 (94%)
Frame = -1
Query: 594 QLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNA 415
QLY RSL+AALCFHAYQQVSYMILQRVSPVTHS+GNCVKRVVVIV+SV+FF+TPVSP+N
Sbjct: 326 QLYTRSLIAALCFHAYQQVSYMILQRVSPVTHSLGNCVKRVVVIVTSVLFFRTPVSPING 385
Query: 414 MGTALALTGVFLYSRVKRIKPK 349
+GT +AL GVFLYSRVKRIKPK
Sbjct: 386 LGTGVALAGVFLYSRVKRIKPK 407
>gb|AAM63308.1| phosphate/phosphoenolpyruvate translocator precursor [Arabidopsis
thaliana]
Length = 408
Score = 144 bits (363), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = -1
Query: 594 QLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNA 415
Q+Y +SL+AALCFHAYQQVSYMIL RVSPVTHSVGNCVKRVVVIVSSVIFF+TPVSPVNA
Sbjct: 323 QIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNA 382
Query: 414 MGTALALTGVFLYSRVKRIKPK 349
GT +AL GVFLYSRVK IKPK
Sbjct: 383 FGTGIALAGVFLYSRVKGIKPK 404
>gb|AAF63704.1|AF209210_1 phosphate/phosphoenolpyruvate translocator [Arabidopsis thaliana]
Length = 408
Score = 144 bits (363), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = -1
Query: 594 QLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNA 415
Q+Y +SL+AALCFHAYQQVSYMIL RVSPVTHSVGNCVKRVVVIVSSVIFF+TPVSPVNA
Sbjct: 323 QIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNA 382
Query: 414 MGTALALTGVFLYSRVKRIKPK 349
GT +AL GVFLYSRVK IKPK
Sbjct: 383 FGTGIALAGVFLYSRVKGIKPK 404
>gb|AAB40646.1| phosphate/phosphoenolpyruvate translocator precursor; PPT
[Arabidopsis thaliana]
Length = 408
Score = 144 bits (363), Expect = 8e-34
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = -1
Query: 594 QLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNA 415
Q+Y +SL+AALCFHAYQQVSYMIL RVSPVTHSVGNCVKRVVVIVSSVIFF+TPVSPVNA
Sbjct: 323 QIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNA 382
Query: 414 MGTALALTGVFLYSRVKRIKPK 349
GT +AL GVFLYSRVK IKPK
Sbjct: 383 FGTGIALAGVFLYSRVKGIKPK 404
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,877,925
Number of Sequences: 1393205
Number of extensions: 10684476
Number of successful extensions: 32190
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 29918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32073
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
