Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001909A_C01 KMC001909A_c01
(516 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191281.1| UDP-GlcNAc:dolichol phosphate N-acetylglucosami... 161 2e-42
ref|NP_565950.1| UDP-GlcNAc:dolichol phosphate N-acetylglucosami... 160 6e-39
gb|AAM61102.1| putative UDP-N-acetylglucosamine-dolichyl-phospha... 160 6e-39
pir||T02444 UDP-N-acetylglucosamine-dolichyl-phosphate-N-acetylg... 147 5e-35
dbj|BAC16065.1| putative UDP-N-acetylglucosamine--dolichyl-phosp... 134 4e-34
>ref|NP_191281.1| UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate
transferase, putative; protein id: At3g57220.1,
supported by cDNA: 99839. [Arabidopsis thaliana]
gi|11280187|pir||T45800
UDP-N-acetylglucosamine-dolichyl-phosphate
N-acetylglucosaminephosphotransferase (EC 2.7.8.15)
F28O9.70 [similarity] - Arabidopsis thaliana
gi|6735301|emb|CAB68128.1| UDP-GlcNAc:dolichol phosphate
N-acetylglucosamine-1-phosphate transferase-like protein
[Arabidopsis thaliana] gi|21618187|gb|AAM67237.1|
UDP-GlcNAc:dolichol phosphate
N-acetylglucosamine-1-phosphate transferase-like protein
[Arabidopsis thaliana]
Length = 426
Score = 161 bits (407), Expect(2) = 2e-42
Identities = 75/95 (78%), Positives = 85/95 (88%)
Frame = -2
Query: 515 TMAVAGILGHFSETLLIFFLPQVLNFLLSLPQLSGYIPCPRHRLPRFDPQTGLLTGTNDG 336
TMAV GILGHFSETLLIFFLPQVLNFLLSLPQL+G + CPRHRLP++DP TGLLTGT DG
Sbjct: 322 TMAVVGILGHFSETLLIFFLPQVLNFLLSLPQLAGIVKCPRHRLPKYDPATGLLTGTKDG 381
Query: 335 TLVNFFLRTLGRKSEKALCVYLLVFQALACCFLFL 231
TLVN +LR GRK+EK+LC++LLVFQALAC F F+
Sbjct: 382 TLVNVYLRIFGRKTEKSLCIHLLVFQALACAFCFM 416
Score = 32.7 bits (73), Expect(2) = 2e-42
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 244 AFCFFLRYLLAGWYK 200
AFCF LR+ LAGWYK
Sbjct: 412 AFCFMLRHFLAGWYK 426
>ref|NP_565950.1| UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate
transferase; protein id: At2g41490.1, supported by cDNA:
111048., supported by cDNA: gi_15724327, supported by
cDNA: gi_19699117, supported by cDNA: gi_5804771
[Arabidopsis thaliana] gi|11280186|pir||T50678
UDP-N-acetylglucosamine-dolichyl-phosphate
N-acetylglucosaminephosphotransferase (EC 2.7.8.15)
[validated] - Arabidopsis thaliana
gi|5804772|dbj|BAA83586.1| UDP-GlcNAc:dolichol phosphate
N-acetylglucosamine-1-phosphate transferase [Arabidopsis
thaliana] gi|5804774|dbj|BAA83587.1| UDP-GlcNAc:dolichol
phosphate N-acetylglucosamine-1-phosphate transferase
[Arabidopsis thaliana]
gi|15724328|gb|AAL06557.1|AF412104_1 T26J13.8/T26J13.8
[Arabidopsis thaliana] gi|19699118|gb|AAL90925.1|
T26J13.8/T26J13.8 [Arabidopsis thaliana]
gi|20196950|gb|AAB84331.2| putative
UDP-N-acetylglucosamine--dolichyl-phosphate
N-acetylglucosaminephosphotransferase [Arabidopsis
thaliana] gi|20197201|gb|AAM14968.1| putative
UDP-N-acetylglucosamine--dolichyl-phosphate
N-acetylglucosaminephosphotransferase [Arabidopsis
thaliana]
Length = 431
Score = 160 bits (406), Expect = 6e-39
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = -2
Query: 515 TMAVAGILGHFSETLLIFFLPQVLNFLLSLPQLSGYIPCPRHRLPRFDPQTGLLTGTNDG 336
TMAV GILGHFSETLLIFFLPQVLNFLLSLPQL+G + CPRHRLPR+DP TGLLTGT DG
Sbjct: 327 TMAVVGILGHFSETLLIFFLPQVLNFLLSLPQLAGIVKCPRHRLPRYDPATGLLTGTKDG 386
Query: 335 TLVNFFLRTLGRKSEKALCVYLLVFQALACCFLFL 231
TLVN +LR G KSEK+LC++LLVFQALAC F F+
Sbjct: 387 TLVNVYLRLFGPKSEKSLCIHLLVFQALACAFCFI 421
Score = 33.1 bits (74), Expect = 1.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 298 SLKRRFVFIFLFSRLWHAAFCFFLRYLLAGWYK 200
S K + + +F L AFCF LR+ LAGWYK
Sbjct: 400 SEKSLCIHLLVFQAL-ACAFCFILRHFLAGWYK 431
>gb|AAM61102.1| putative UDP-N-acetylglucosamine-dolichyl-phosphate
N-acetylglucosaminephosphotransferase [Arabidopsis
thaliana]
Length = 431
Score = 160 bits (406), Expect = 6e-39
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = -2
Query: 515 TMAVAGILGHFSETLLIFFLPQVLNFLLSLPQLSGYIPCPRHRLPRFDPQTGLLTGTNDG 336
TMAV GILGHFSETLLIFFLPQVLNFLLSLPQL+G + CPRHRLPR+DP TGLLTGT DG
Sbjct: 327 TMAVVGILGHFSETLLIFFLPQVLNFLLSLPQLAGIVKCPRHRLPRYDPATGLLTGTKDG 386
Query: 335 TLVNFFLRTLGRKSEKALCVYLLVFQALACCFLFL 231
TLVN +LR G KSEK+LC++LLVFQALAC F F+
Sbjct: 387 TLVNVYLRLFGPKSEKSLCIHLLVFQALACAFCFI 421
Score = 33.1 bits (74), Expect = 1.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 298 SLKRRFVFIFLFSRLWHAAFCFFLRYLLAGWYK 200
S K + + +F L AFCF LR+ LAGWYK
Sbjct: 400 SEKSLCIHLLVFQAL-ACAFCFILRHFLAGWYK 431
>pir||T02444 UDP-N-acetylglucosamine-dolichyl-phosphate-N-acetylglucosami
nephosphotransferase homolog T32G6.1 - Arabidopsis
thaliana
Length = 417
Score = 147 bits (372), Expect = 5e-35
Identities = 70/86 (81%), Positives = 77/86 (89%)
Frame = -2
Query: 515 TMAVAGILGHFSETLLIFFLPQVLNFLLSLPQLSGYIPCPRHRLPRFDPQTGLLTGTNDG 336
TMAV GILGHFSETLLIFFLPQVLNFLLSLPQL+G + CPRHRLPR+DP TGLLTGT DG
Sbjct: 320 TMAVVGILGHFSETLLIFFLPQVLNFLLSLPQLAGIVKCPRHRLPRYDPATGLLTGTKDG 379
Query: 335 TLVNFFLRTLGRKSEKALCVYLLVFQ 258
TLVN +LR G KSEK+LC++LLVFQ
Sbjct: 380 TLVNVYLRLFGPKSEKSLCIHLLVFQ 405
>dbj|BAC16065.1| putative UDP-N-acetylglucosamine--dolichyl-phosp hate
N-acetylglucosaminephosphotransferase [Oryza sativa
(japonica cultivar-group)]
Length = 424
Score = 134 bits (337), Expect(2) = 4e-34
Identities = 65/93 (69%), Positives = 76/93 (80%)
Frame = -2
Query: 512 MAVAGILGHFSETLLIFFLPQVLNFLLSLPQLSGYIPCPRHRLPRFDPQTGLLTGTNDGT 333
+AV GILGHF ETLL+FFLP+VLNFL S+PQL ++PCPRHRLP FDP TGLLTGT DG
Sbjct: 323 LAVVGILGHF-ETLLLFFLPEVLNFLCSVPQLFKFVPCPRHRLP-FDPHTGLLTGTKDGN 380
Query: 332 LVNFFLRTLGRKSEKALCVYLLVFQALACCFLF 234
LVN FLR GR +E+ LC+ LL+FQAL+C F F
Sbjct: 381 LVNIFLRIFGRCTERTLCIRLLIFQALSCLFCF 413
Score = 32.0 bits (71), Expect(2) = 4e-34
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -3
Query: 241 FCFFLRYLLAGWYK 200
FCF+LRY++ GWYK
Sbjct: 411 FCFWLRYMITGWYK 424
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,001,559
Number of Sequences: 1393205
Number of extensions: 8810777
Number of successful extensions: 22310
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 21811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22294
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
