Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001901A_C01 KMC001901A_c01
(729 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P35085|CBPA_DICDI CALCIUM-BINDING PROTEIN gi|416313|gb|AAA034... 59 9e-08
emb|CAA72125.1| annexin max4 [Oryzias latipes] 54 2e-06
ref|NP_609840.1| CG6639-PA [Drosophila melanogaster] gi|7298389|... 53 5e-06
ref|NP_568642.1| expressed protein; protein id: At5g45350.1, sup... 47 3e-04
ref|NP_608846.1| CG15635-PA [Drosophila melanogaster] gi|2294519... 47 3e-04
>sp|P35085|CBPA_DICDI CALCIUM-BINDING PROTEIN gi|416313|gb|AAA03471.1| calcium binding
protein
Length = 467
Score = 58.5 bits (140), Expect = 9e-08
Identities = 31/75 (41%), Positives = 33/75 (43%), Gaps = 4/75 (5%)
Frame = -3
Query: 718 GGYPPNSQAGVYPPNNQ-GVYPPNQNN--YAGRTPPNVGGAPPNSAY-GPNAGYPSNQNN 551
G YPP Q G YPP Q G YPP Q Y G+ PP P AY G YP Q
Sbjct: 237 GAYPPQGQPGAYPPQGQPGAYPPQQQQVAYPGQQPPMGAYPPQQGAYPGQQGAYPGQQGA 296
Query: 550 YAGNMEGVPTKPERG 506
Y G P +P G
Sbjct: 297 YPGQQGAYPGQPPMG 311
Score = 47.8 bits (112), Expect = 2e-04
Identities = 31/72 (43%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -3
Query: 724 QAGGYPPNS--QAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYPSNQNN 551
Q G YPP Q G YPP QG YPP Q G PP G P AY P G QN
Sbjct: 143 QPGQYPPQQPGQPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQP--GAYPPQQGV---QNT 197
Query: 550 YAGNMEGVPTKP 515
A G P +P
Sbjct: 198 LA--KTGAPGQP 207
Score = 41.6 bits (96), Expect = 0.012
Identities = 26/71 (36%), Positives = 28/71 (38%), Gaps = 7/71 (9%)
Frame = -3
Query: 715 GYPPNS--QAGVYPPNNQGV--YPPNQNNYAGRTPPNVGGA---PPNSAYGPNAGYPSNQ 557
GYPP Q+G YPP G YPP Q G+ PP G PP P P Q
Sbjct: 104 GYPPQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQYPPQQPGQPGQYPPQQQ 163
Query: 556 NNYAGNMEGVP 524
Y G P
Sbjct: 164 GQYPPQQPGQP 174
Score = 39.7 bits (91), Expect = 0.044
Identities = 25/74 (33%), Positives = 27/74 (35%), Gaps = 8/74 (10%)
Frame = -3
Query: 712 YPPNSQAGV------YPPNNQGVYPPNQNNYAGRTPPNVGGAP--PNSAYGPNAGYPSNQ 557
YP Q G YPP G YPP Q G+ PP G P P G + YP Q
Sbjct: 61 YPGTQQPGAPGAPGQYPPQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQ 120
Query: 556 NNYAGNMEGVPTKP 515
G P P
Sbjct: 121 PGQPGYPPQQPGAP 134
Score = 36.6 bits (83), Expect = 0.37
Identities = 25/76 (32%), Positives = 26/76 (33%), Gaps = 20/76 (26%)
Frame = -3
Query: 724 QAGGYPPNSQAGVYPPNNQ------------------GVYPPNQNNYAGR--TPPNVGGA 605
Q G YPP Q G YPP Q G YP Q Y G+ P GA
Sbjct: 244 QPGAYPPQGQPGAYPPQQQQVAYPGQQPPMGAYPPQQGAYPGQQGAYPGQQGAYPGQQGA 303
Query: 604 PPNSAYGPNAGYPSNQ 557
P P YP Q
Sbjct: 304 YPGQP--PMGAYPGQQ 317
>emb|CAA72125.1| annexin max4 [Oryzias latipes]
Length = 508
Score = 54.3 bits (129), Expect = 2e-06
Identities = 36/77 (46%), Positives = 37/77 (47%), Gaps = 4/77 (5%)
Frame = -3
Query: 724 QAGGYPPNSQAGVYPPNNQGVYPPNQNNY---AGRTPPNVGGAPPNSAYGPNA-GYPSNQ 557
QAGGYPP QAG YPP G YPP Y AG PP GG P Y P A GYP
Sbjct: 37 QAGGYPP--QAGGYPPQAGG-YPPQAGGYPPAAGGYPPAAGGYPSAGGYPPQAGGYPPAA 93
Query: 556 NNYAGNMEGVPTKPERG 506
Y G P P+ G
Sbjct: 94 GGYPPAAGGFP--PQAG 108
Score = 53.5 bits (127), Expect = 3e-06
Identities = 34/76 (44%), Positives = 37/76 (47%), Gaps = 9/76 (11%)
Frame = -3
Query: 724 QAGGYPPNS-----QAGVYPPNNQGVYPPNQNNY---AGRTPPNVGGAPPNSAYGPNA-G 572
QAGGYPP + QAG YPP G YPP Y AG PP GG PP + P+A G
Sbjct: 23 QAGGYPPQAGGYPPQAGGYPP-QAGGYPPQAGGYPPQAGGYPPAAGGYPPAAGGYPSAGG 81
Query: 571 YPSNQNNYAGNMEGVP 524
YP Y G P
Sbjct: 82 YPPQAGGYPPAAGGYP 97
Score = 52.0 bits (123), Expect = 9e-06
Identities = 32/64 (50%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -3
Query: 724 QAGGYPPNSQAGVYPPNNQGVYPPNQNNY---AGRTPPNVGGAPPNSAYGPNA--GYPSN 560
QAGGYPP QAG YPP G YPP Y AG PP GG PP + P A GYP
Sbjct: 16 QAGGYPP--QAGGYPP-QAGGYPPQAGGYPPQAGGYPPQAGGYPPQAGGYPPAAGGYPPA 72
Query: 559 QNNY 548
Y
Sbjct: 73 AGGY 76
Score = 47.4 bits (111), Expect = 2e-04
Identities = 32/84 (38%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Frame = -3
Query: 724 QAGGYPPNSQAGVYPPN-----NQGVYPPNQNNY---AGRTPPNVGGAPPNSA--YGPNA 575
QAGGYPP AG YPP + G YPP Y AG PP GG PP + P+
Sbjct: 58 QAGGYPP--AAGGYPPAAGGYPSAGGYPPQAGGYPPAAGGYPPAAGGFPPQAGGYPAPSG 115
Query: 574 GYPSNQNNY-AGNMEGVPTKPERG 506
G+P + G P+ P G
Sbjct: 116 GFPPQAGGFPQPGAGGYPSMPPAG 139
Score = 39.3 bits (90), Expect = 0.057
Identities = 28/72 (38%), Positives = 31/72 (42%), Gaps = 2/72 (2%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNS-AYGPNA-GYPSNQNNYAG 542
GYPP Q+G YPP AG PP GG PP + Y P A GYP Y
Sbjct: 5 GYPP--QSGGYPPQ------------AGGYPPQAGGYPPQAGGYPPQAGGYPPQAGGYPP 50
Query: 541 NMEGVPTKPERG 506
G P P+ G
Sbjct: 51 QAGGYP--PQAG 60
Score = 34.3 bits (77), Expect = 1.8
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = -3
Query: 661 YPPNQNNYAGRTPPNVGGAPPNS-AYGPNA-GYPSNQNNYAGNMEGVPTKPERGRVFPK 491
YPP Y PP GG PP + Y P A GYP Y G P P+ G P+
Sbjct: 6 YPPQSGGY----PPQAGGYPPQAGGYPPQAGGYPPQAGGYPPQAGGYP--PQAGGYPPQ 58
>ref|NP_609840.1| CG6639-PA [Drosophila melanogaster] gi|7298389|gb|AAF53614.1|
CG6639-PA [Drosophila melanogaster]
gi|18447590|gb|AAL68356.1| RH50269p [Drosophila
melanogaster]
Length = 494
Score = 52.8 bits (125), Expect = 5e-06
Identities = 32/68 (47%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -3
Query: 718 GGYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGP--NAGYPSNQNNYA 545
GGYP N+ G YP NN G YP N Y P N GG P N+ P N GYP+N Y
Sbjct: 132 GGYPVNN--GGYPVNNGG-YPSNNGGY----PSNNGGYPVNNGGYPVNNGGYPANNGGYP 184
Query: 544 GNMEGVPT 521
N G PT
Sbjct: 185 ANNGGYPT 192
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/69 (43%), Positives = 32/69 (45%), Gaps = 3/69 (4%)
Frame = -3
Query: 718 GGYPPNSQAGVYPPNNQGVYPPNQNNYA---GRTPPNVGGAPPNSAYGPNAGYPSNQNNY 548
GGYP N+ G YP NN G YP N Y G P N GG P N N GYP+
Sbjct: 146 GGYPSNN--GGYPSNNGG-YPVNNGGYPVNNGGYPANNGGYPAN-----NGGYPTTNVGN 197
Query: 547 AGNMEGVPT 521
N G PT
Sbjct: 198 PTNNGGNPT 206
Score = 39.7 bits (91), Expect = 0.044
Identities = 23/54 (42%), Positives = 25/54 (45%), Gaps = 2/54 (3%)
Frame = -3
Query: 679 PNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGP--NAGYPSNQNNYAGNMEGVP 524
P N P + N G T PN GG P N+ P N GYPSN Y N G P
Sbjct: 111 PTNNERNPATEPNNGGYTTPN-GGYPVNNGGYPVNNGGYPSNNGGYPSNNGGYP 163
Score = 33.1 bits (74), Expect = 4.1
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -3
Query: 655 PNQNNYAGRTPPNVGG-APPNSAYG-PNAGYPSNQNNYAGNMEGVPT 521
P N T PN GG PN Y N GYP N Y N G P+
Sbjct: 111 PTNNERNPATEPNNGGYTTPNGGYPVNNGGYPVNNGGYPSNNGGYPS 157
>ref|NP_568642.1| expressed protein; protein id: At5g45350.1, supported by cDNA:
22538., supported by cDNA: gi_15529251 [Arabidopsis
thaliana] gi|2129603|pir||S65780 glycine/proline-rich
protein GPRP - Arabidopsis thaliana
gi|1465364|emb|CAA59059.1| GPRP [Arabidopsis thaliana]
gi|9758725|dbj|BAB09163.1| gene_id:MFC19.1~unknown
protein [Arabidopsis thaliana]
gi|15529252|gb|AAK97720.1| AT5g45350/MFC19_1
[Arabidopsis thaliana] gi|16974403|gb|AAL31127.1|
AT5g45350/MFC19_1 [Arabidopsis thaliana]
gi|21592344|gb|AAM64295.1| unknown [Arabidopsis
thaliana]
Length = 177
Score = 47.0 bits (110), Expect = 3e-04
Identities = 29/66 (43%), Positives = 36/66 (53%), Gaps = 3/66 (4%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTP-PNVGGAPPNSAYG--PNAGYPSNQNNYA 545
GYPP G YPP G YPP Y G P P GG PP +G P AGYP++ + +A
Sbjct: 48 GYPP----GAYPPAPGG-YPPAPG-YGGYPPAPGYGGYPPAPGHGGYPPAGYPAHHSGHA 101
Query: 544 GNMEGV 527
G + G+
Sbjct: 102 GGIGGM 107
Score = 32.0 bits (71), Expect = 9.2
Identities = 27/59 (45%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 564 EGYP----AFGP*ALLGGA-PPTLGGVLPA*LFWFGGYTPWL-LGG*TPAWLLGGYPPA 722
+GYP A+ P GA PP GG PA +GGY P GG PA GGYPPA
Sbjct: 35 QGYPPPPGAYPPAGYPPGAYPPAPGGYPPAP--GYGGYPPAPGYGGYPPAPGHGGYPPA 91
>ref|NP_608846.1| CG15635-PA [Drosophila melanogaster] gi|22945199|gb|AAF50995.3|
CG15635-PA [Drosophila melanogaster]
Length = 1118
Score = 47.0 bits (110), Expect = 3e-04
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAG-YP 566
G+PP SQ P N G+YPP+ + PPN GG PP S PN G YP
Sbjct: 861 GHPPGSQK----PPNVGIYPPSTGSIPPLRPPNQGGHPPGSQKPPNVGIYP 907
Score = 46.6 bits (109), Expect = 4e-04
Identities = 29/79 (36%), Positives = 35/79 (43%), Gaps = 5/79 (6%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYPSNQNNYAG-- 542
G+PP SQ P N G+YPP+ + P GG PP S PN G PS G
Sbjct: 743 GHPPGSQK----PPNSGIYPPSTGSIPPSGPLTQGGHPPGSLLPPNTGLPSGSIPPLGSP 798
Query: 541 NMEGVP---TKPERGRVFP 494
N G P KP ++P
Sbjct: 799 NQIGHPPGSQKPPNSGIYP 817
Score = 46.2 bits (108), Expect = 5e-04
Identities = 30/80 (37%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = -3
Query: 718 GGYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYPSNQNNYAG- 542
GG+PP SQ P N G+YPP+ P GG PP S PN G PS G
Sbjct: 683 GGHPPGSQK----PPNVGIYPPSTGWIPPSGPLTQGGHPPGSLLPPNTGLPSGSIPPLGS 738
Query: 541 -NMEGVP---TKPERGRVFP 494
N G P KP ++P
Sbjct: 739 PNQIGHPPGSQKPPNSGIYP 758
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYP 566
G+PP SQ P N G+YPP+ + P GG PP S PN G P
Sbjct: 979 GHPPGSQK----PPNSGIYPPSTGSIPPSGPLTQGGHPPGSLLPPNTGLP 1024
Score = 42.7 bits (99), Expect = 0.005
Identities = 28/79 (35%), Positives = 34/79 (42%), Gaps = 5/79 (6%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYPSNQNNYAG-- 542
G+PP SQ P N G+YPP+ P GG PP S PN G P + G
Sbjct: 802 GHPPGSQK----PPNSGIYPPSTGWIPPSGPLTQGGHPPGSLLPPNTGLPPGSISPLGSP 857
Query: 541 NMEGVP---TKPERGRVFP 494
N G P KP ++P
Sbjct: 858 NQIGHPPGSQKPPNVGIYP 876
Score = 42.4 bits (98), Expect(2) = 8e-04
Identities = 22/51 (43%), Positives = 25/51 (48%)
Frame = -3
Query: 718 GGYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYP 566
GG+PP SQ P N G+YPP+ P GG PP S PN G P
Sbjct: 506 GGHPPGSQK----PPNVGIYPPSTGWIPPFGPLTQGGHPPGSLLPPNTGLP 552
Score = 41.2 bits (95), Expect(2) = 0.002
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPN----VGGAPPNSAYGPNAGYP 566
G+PP SQ P N G+YPP+ G TPP+ GG PP S PN G P
Sbjct: 566 GHPPGSQK----PPNVGIYPPS----TGWTPPSGPLTQGGHPPGSLLPPNTGLP 611
Score = 39.7 bits (91), Expect = 0.044
Identities = 32/104 (30%), Positives = 39/104 (36%), Gaps = 29/104 (27%)
Frame = -3
Query: 718 GGYPPNSQ----AGVYPPNN----------QGVYPPNQNNYAGRT----------PPNVG 611
GG+PP SQ G+YPP+ QG +PP + PPN G
Sbjct: 891 GGHPPGSQKPPNVGIYPPSTGWIPPSGPLTQGGHPPGSQVPSNSVLPPGSIPPLRPPNQG 950
Query: 610 GAPPNSAYGPNAGYPSNQNNYAG--NMEGVP---TKPERGRVFP 494
PP S PN G P G N G P KP ++P
Sbjct: 951 RHPPGSQVPPNTGLPPGSIPPLGSPNQIGHPPGSQKPPNSGIYP 994
Score = 38.9 bits (89), Expect = 0.075
Identities = 26/80 (32%), Positives = 32/80 (39%), Gaps = 6/80 (7%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYPSNQ------N 554
G+PP SQ P N G+YPP+ P G PP S PN G P
Sbjct: 625 GHPPGSQK----PPNVGIYPPSTGWIPPSGPLTQSGHPPGSLLPPNTGLPPGSIPPLRPP 680
Query: 553 NYAGNMEGVPTKPERGRVFP 494
N G+ G P G ++P
Sbjct: 681 NQGGHPPGSQKPPNVG-IYP 699
Score = 38.5 bits (88), Expect = 0.098
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Frame = -3
Query: 712 YPP-------NSQAGVYPPNNQGVYPPNQNNYAGRTPP----NVGGAPPNSAYGPNAGYP 566
YPP Q G + P N G+YPP+ G PP + GG PP S PN+G P
Sbjct: 261 YPPFGQQNQIGHQPGSHKPPNSGIYPPS----TGWIPPSGSLSQGGHPPGSQLPPNSGLP 316
Score = 38.1 bits (87), Expect(2) = 0.017
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -3
Query: 727 SQAGGYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYPS 563
S GG+PP S + PPN G+YPP+ P GG PP S PN P+
Sbjct: 385 SNQGGHPPGS---LLPPN-VGIYPPSTGWIPPSGPLTQGGHPPGSQVPPNFVLPA 435
Score = 37.0 bits (84), Expect = 0.28
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -3
Query: 718 GGYPPNSQAGVYPPNN---QGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAG-YP 566
GG+PP S +YPPN+ G PP + P N GG PP S PN G YP
Sbjct: 360 GGHPPGS---LYPPNSVLAPGSIPPLR-------PSNQGGHPPGSLLPPNVGIYP 404
Score = 37.0 bits (84), Expect = 0.28
Identities = 24/65 (36%), Positives = 34/65 (51%), Gaps = 9/65 (13%)
Frame = -3
Query: 715 GYPPNSQA----GVYPPN---NQGVYPPNQ--NNYAGRTPPNVGGAPPNSAYGPNAGYPS 563
G+PP SQA G PP N PPN N +TPPN G PP + + P+ G P+
Sbjct: 178 GHPPESQAPTNSGFVPPPAIWNPPYGPPNPDGNPPESQTPPNSGFVPPPAIWSPSVG-PT 236
Query: 562 NQNNY 548
+++ +
Sbjct: 237 SEDGH 241
Score = 36.6 bits (83), Expect = 0.37
Identities = 31/83 (37%), Positives = 35/83 (41%), Gaps = 9/83 (10%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGY---------PS 563
G PP SQ PPN++ V PP N A PPN G PP S N+G+ P
Sbjct: 147 GNPPGSQT---PPNSELVPPPAIWNPA-YEPPNQIGHPPESQAPTNSGFVPPPAIWNPPY 202
Query: 562 NQNNYAGNMEGVPTKPERGRVFP 494
N GN T P G V P
Sbjct: 203 GPPNPDGNPPESQTPPNSGFVPP 225
Score = 36.2 bits (82), Expect = 0.49
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 22/96 (22%)
Frame = -3
Query: 715 GYPPNSQAGVYPPN------------NQGVYPPNQNNYAGRTPPN----VGGAPPNSAYG 584
G PP S + PPN N G+YPP+ G PP+ GG PP S Y
Sbjct: 314 GLPPGSIPPLRPPNQIGDPPGSQMPSNLGIYPPSM----GWIPPSGSLIQGGHPPGSLYP 369
Query: 583 PNAGY------PSNQNNYAGNMEGVPTKPERGRVFP 494
PN+ P +N G+ G P G ++P
Sbjct: 370 PNSVLAPGSIPPLRPSNQGGHPPGSLLPPNVG-IYP 404
Score = 36.2 bits (82), Expect = 0.49
Identities = 28/81 (34%), Positives = 35/81 (42%), Gaps = 11/81 (13%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPP--------NQNNYAGRTPPNVGGAPPNSA-YGPNAGY-- 569
G+PP SQA P+N G PP Q N G P + PPNS Y P+ G+
Sbjct: 240 GHPPESQA----PSNSGFVPPLAICYPPFGQQNQIGHQPGS--HKPPNSGIYPPSTGWIP 293
Query: 568 PSNQNNYAGNMEGVPTKPERG 506
PS + G+ G P G
Sbjct: 294 PSGSLSQGGHPPGSQLPPNSG 314
Score = 34.7 bits (78), Expect = 1.4
Identities = 26/80 (32%), Positives = 32/80 (39%), Gaps = 6/80 (7%)
Frame = -3
Query: 715 GYPPNSQAGVYPPNNQGVYPPNQNNYAGRTPPNVGGAPPNSAYGPNAGYPSNQ------N 554
G PP S + PPN G+YPP+ P GG P S PN G P
Sbjct: 448 GQPPGS---LLPPN-VGIYPPSTGWIPPSGPLTQGGHPTGSLLPPNTGLPPGSIPPLRPP 503
Query: 553 NYAGNMEGVPTKPERGRVFP 494
N G+ G P G ++P
Sbjct: 504 NQGGHPPGSQKPPNVG-IYP 522
Score = 32.3 bits (72), Expect = 7.0
Identities = 25/81 (30%), Positives = 36/81 (43%), Gaps = 6/81 (7%)
Frame = -3
Query: 718 GGYPPNS----QAGVYPPNNQGVYPPNQNNY--AGRTPPNVGGAPPNSAYGPNAGYPSNQ 557
GG+PP S G+ P + + PNQ + + PPNVG PP++ P P
Sbjct: 832 GGHPPGSLLPPNTGLPPGSISPLGSPNQIGHPPGSQKPPNVGIYPPSTGSIP----PLRP 887
Query: 556 NNYAGNMEGVPTKPERGRVFP 494
N G+ G P G ++P
Sbjct: 888 PNQGGHPPGSQKPPNVG-IYP 907
Score = 22.3 bits (46), Expect(2) = 8e-04
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 4/22 (18%)
Frame = -1
Query: 531 GCPPNQ----NVGGYSPNAGWS 478
G PP NVG Y P+ GW+
Sbjct: 566 GHPPGSQKPPNVGIYPPSTGWT 587
Score = 21.9 bits (45), Expect(2) = 0.002
Identities = 10/21 (47%), Positives = 11/21 (51%), Gaps = 4/21 (19%)
Frame = -1
Query: 531 GCPPNQ----NVGGYSPNAGW 481
G PP NVG Y P+ GW
Sbjct: 625 GHPPGSQKPPNVGIYPPSTGW 645
Score = 21.9 bits (45), Expect(2) = 0.017
Identities = 10/21 (47%), Positives = 11/21 (51%), Gaps = 4/21 (19%)
Frame = -1
Query: 531 GCPPNQ----NVGGYSPNAGW 481
G PP NVG Y P+ GW
Sbjct: 448 GQPPGSLLPPNVGIYPPSTGW 468
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 647,778,659
Number of Sequences: 1393205
Number of extensions: 15872845
Number of successful extensions: 51416
Number of sequences better than 10.0: 289
Number of HSP's better than 10.0 without gapping: 43089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50253
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34343566934
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
