Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001881A_C01 KMC001881A_c01
(575 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S65069 chitinase (EC 3.2.1.14) class II - peanut gi|1237025... 221 3e-63
gb|AAF00131.1|AF147091_1 class II chitinase [Fragaria x ananassa] 222 1e-60
gb|AAD54935.1|AF141373_1 chitinase precursor [Petroselinum crispum] 218 3e-60
gb|AAD54936.1|AF141374_1 chitinase precursor [Petroselinum crispum] 218 3e-60
ref|NP_171738.1| glycosyl hydrolase family 19 (chitinase); prote... 210 3e-56
>pir||S65069 chitinase (EC 3.2.1.14) class II - peanut
gi|1237025|emb|CAA57773.1| chitinase (class II) [Arachis
hypogaea]
Length = 277
Score = 221 bits (562), Expect(2) = 3e-63
Identities = 98/118 (83%), Positives = 111/118 (94%)
Frame = -2
Query: 574 GKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVTNSSLVAFRTSLWFWMTERKPKPS 395
GKSYKGRGPIQLSWNYNYGPAGKALGFDGL+NP+IV+N+S++AF+T+LWFWMTE+KPKPS
Sbjct: 143 GKSYKGRGPIQLSWNYNYGPAGKALGFDGLKNPDIVSNNSVIAFKTALWFWMTEQKPKPS 202
Query: 394 CHNVMIGKYVPTQADIAANRTAGFGLVTNIINGGLECGLSDDGRVNDRIGYFERYAGL 221
CHNVM+G YVPT +D AANRT GFGLVTNIINGGLECG+ DD RVNDRIGYF+RYA L
Sbjct: 203 CHNVMVGNYVPTASDRAANRTLGFGLVTNIINGGLECGVPDDARVNDRIGYFQRYAKL 260
Score = 43.1 bits (100), Expect(2) = 3e-63
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -3
Query: 222 LFNVDTGPNLDCAYQKSF 169
LFNVDTGPNLDCAYQKSF
Sbjct: 260 LFNVDTGPNLDCAYQKSF 277
>gb|AAF00131.1|AF147091_1 class II chitinase [Fragaria x ananassa]
Length = 277
Score = 222 bits (565), Expect(2) = 1e-60
Identities = 99/118 (83%), Positives = 112/118 (94%)
Frame = -2
Query: 574 GKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVTNSSLVAFRTSLWFWMTERKPKPS 395
GKSYKGRGPIQLSWNYNYG AGKALGFDGL+NPE+V NSSL+AF+T+LWFWMTE+KPKPS
Sbjct: 143 GKSYKGRGPIQLSWNYNYGQAGKALGFDGLKNPEVVANSSLIAFKTALWFWMTEQKPKPS 202
Query: 394 CHNVMIGKYVPTQADIAANRTAGFGLVTNIINGGLECGLSDDGRVNDRIGYFERYAGL 221
CH+VM+G+YV TQADIAANRTAGFG+VTNIINGGLECG+ +D RVNDRIGYF+RYA L
Sbjct: 203 CHDVMVGRYVLTQADIAANRTAGFGMVTNIINGGLECGIGNDARVNDRIGYFKRYASL 260
Score = 33.5 bits (75), Expect(2) = 1e-60
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -3
Query: 237 KDMQGLFNVDTGPNLDCAYQKSF 169
K LF V TGPNLDC QKSF
Sbjct: 255 KRYASLFGVQTGPNLDCENQKSF 277
>gb|AAD54935.1|AF141373_1 chitinase precursor [Petroselinum crispum]
Length = 273
Score = 218 bits (554), Expect(2) = 3e-60
Identities = 97/117 (82%), Positives = 110/117 (93%)
Frame = -2
Query: 571 KSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVTNSSLVAFRTSLWFWMTERKPKPSC 392
K+Y+GRGPIQLSWNYNYGPAGKALGFDGL+NPEIV N+S++AF+T+LWFWMTE+KPKPSC
Sbjct: 140 KTYQGRGPIQLSWNYNYGPAGKALGFDGLKNPEIVANNSVIAFKTALWFWMTEQKPKPSC 199
Query: 391 HNVMIGKYVPTQADIAANRTAGFGLVTNIINGGLECGLSDDGRVNDRIGYFERYAGL 221
H+VMIG+Y PT ADIAANRTAGFGLVTNIINGGLECG+ D RVNDRIGYF+RYA L
Sbjct: 200 HDVMIGRYKPTAADIAANRTAGFGLVTNIINGGLECGIGSDSRVNDRIGYFQRYAKL 256
Score = 36.2 bits (82), Expect(2) = 3e-60
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 222 LFNVDTGPNLDCAYQKSF 169
LFNVDTG NLDCA QKSF
Sbjct: 256 LFNVDTGRNLDCASQKSF 273
>gb|AAD54936.1|AF141374_1 chitinase precursor [Petroselinum crispum]
Length = 271
Score = 218 bits (554), Expect(2) = 3e-60
Identities = 97/117 (82%), Positives = 110/117 (93%)
Frame = -2
Query: 571 KSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVTNSSLVAFRTSLWFWMTERKPKPSC 392
K+Y+GRGPIQLSWNYNYGPAGKALGFDGL+NPEIV N+S++AF+T+LWFWMTE+KPKPSC
Sbjct: 138 KTYQGRGPIQLSWNYNYGPAGKALGFDGLKNPEIVANNSVIAFKTALWFWMTEQKPKPSC 197
Query: 391 HNVMIGKYVPTQADIAANRTAGFGLVTNIINGGLECGLSDDGRVNDRIGYFERYAGL 221
H+VMIG+Y PT ADIAANRTAGFGLVTNIINGGLECG+ D RVNDRIGYF+RYA L
Sbjct: 198 HDVMIGRYKPTAADIAANRTAGFGLVTNIINGGLECGIGSDSRVNDRIGYFQRYAKL 254
Score = 36.2 bits (82), Expect(2) = 3e-60
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 222 LFNVDTGPNLDCAYQKSF 169
LFNVDTG NLDCA QKSF
Sbjct: 254 LFNVDTGRNLDCASQKSF 271
>ref|NP_171738.1| glycosyl hydrolase family 19 (chitinase); protein id: At1g02360.1
[Arabidopsis thaliana] gi|25289339|pir||H86153 probable
chitinase [imported] - Arabidopsis thaliana
gi|9857532|gb|AAG00887.1|AC064879_5 Putative chitinase
[Arabidopsis thaliana]
Length = 272
Score = 210 bits (534), Expect(2) = 3e-56
Identities = 92/117 (78%), Positives = 107/117 (90%)
Frame = -2
Query: 571 KSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVTNSSLVAFRTSLWFWMTERKPKPSC 392
K+Y+GRGPIQLSWNYNYGPAG+ALGFDGLRNPE V+N+S++AF+T+LWFWMT + PKPSC
Sbjct: 138 KTYQGRGPIQLSWNYNYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPKPSC 197
Query: 391 HNVMIGKYVPTQADIAANRTAGFGLVTNIINGGLECGLSDDGRVNDRIGYFERYAGL 221
H+VMIGKY PT AD+AANRT GFGL TNIINGGLECG+ DGRVNDRIG+F+RY GL
Sbjct: 198 HDVMIGKYRPTAADLAANRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGL 254
Score = 30.4 bits (67), Expect(2) = 3e-56
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 225 GLFNVDTGPNLDCAYQKSF 169
GLF V TGPNLDC Q+ +
Sbjct: 253 GLFKVATGPNLDCENQRPY 271
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 511,906,787
Number of Sequences: 1393205
Number of extensions: 11346649
Number of successful extensions: 30536
Number of sequences better than 10.0: 353
Number of HSP's better than 10.0 without gapping: 29190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30390
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
