Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001873A_C07 KMC001873A_c07
(641 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CA... 44 3e-07
ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [... 35 0.19
sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF0... 34 0.19
pir||S56674 annexin homolog RJ4 (clone RJ4) - garden strawberry ... 34 0.19
emb|CAC42899.1| annexin-like protein [Arabidopsis thaliana] 35 0.19
>emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CAD29698.1| annexin
[Medicago truncatula]
Length = 313
Score = 43.5 bits (101), Expect(2) = 3e-07
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2
Query: 352 LVGLVASFTYIGEVINEKLAQTEAEILHRGPWRRK 248
LVGLV +F Y+G+ IN KLAQTEA ILH +K
Sbjct: 147 LVGLVTAFRYVGDEINPKLAQTEAGILHESVKEKK 181
Score = 32.7 bits (73), Expect(2) = 3e-07
Identities = 15/17 (88%), Positives = 16/17 (93%)
Frame = -1
Query: 257 EKKGSHGESIRILTTRS 207
EKKGSH E+IRILTTRS
Sbjct: 179 EKKGSHEEAIRILTTRS 195
>ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [Arabidopsis
thaliana]
Length = 316
Score = 34.7 bits (78), Expect(2) = 0.19
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -2
Query: 352 LVGLVASFTYIGEVINEKLAQTEAEILH 269
LV +V+++ Y GE I+E LAQ+EA ILH
Sbjct: 148 LVAMVSAYKYDGEEIDEMLAQSEAAILH 175
Score = 21.6 bits (44), Expect(2) = 0.19
Identities = 9/16 (56%), Positives = 12/16 (74%)
Frame = -1
Query: 254 KKGSHGESIRILTTRS 207
K H E+IR+L+TRS
Sbjct: 181 KAVDHEETIRVLSTRS 196
>sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF01250.1| annexin
[Fragaria x ananassa]
Length = 314
Score = 34.3 bits (77), Expect(2) = 0.19
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 352 LVGLVASFTYIGEVINEKLAQTEAEILH 269
LV LV ++ Y G IN KLA +EA+ILH
Sbjct: 148 LVALVTAYRYDGHEINAKLANSEADILH 175
Score = 21.9 bits (45), Expect(2) = 0.19
Identities = 10/17 (58%), Positives = 13/17 (75%)
Frame = -1
Query: 257 EKKGSHGESIRILTTRS 207
+K +H E IRIL+TRS
Sbjct: 180 DKAFNHEEIIRILSTRS 196
>pir||S56674 annexin homolog RJ4 (clone RJ4) - garden strawberry (fragment)
gi|643076|gb|AAA79922.1| annexin
Length = 271
Score = 34.3 bits (77), Expect(2) = 0.19
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 352 LVGLVASFTYIGEVINEKLAQTEAEILH 269
LV LV ++ Y G IN KLA +EA+ILH
Sbjct: 105 LVALVTAYRYDGHEINAKLANSEADILH 132
Score = 21.9 bits (45), Expect(2) = 0.19
Identities = 10/17 (58%), Positives = 13/17 (75%)
Frame = -1
Query: 257 EKKGSHGESIRILTTRS 207
+K +H E IRIL+TRS
Sbjct: 137 DKAFNHEEIIRILSTRS 153
>emb|CAC42899.1| annexin-like protein [Arabidopsis thaliana]
Length = 257
Score = 34.7 bits (78), Expect(2) = 0.19
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -2
Query: 352 LVGLVASFTYIGEVINEKLAQTEAEILH 269
LV +V+++ Y GE I+E LAQ+EA ILH
Sbjct: 89 LVAMVSAYKYDGEEIDEMLAQSEAAILH 116
Score = 21.6 bits (44), Expect(2) = 0.19
Identities = 9/16 (56%), Positives = 12/16 (74%)
Frame = -1
Query: 254 KKGSHGESIRILTTRS 207
K H E+IR+L+TRS
Sbjct: 122 KAVDHEETIRVLSTRS 137
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,196,295
Number of Sequences: 1393205
Number of extensions: 10763536
Number of successful extensions: 25669
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25655
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
