Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001872A_C01 KMC001872A_c01
(1000 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC88764.1| serine acetyltransferase 7 [Nicotiana tabacum] 245 7e-64
pir||A57478 serine O-acetyltransferase (EC 2.3.1.30) - watermelo... 242 7e-63
dbj|BAA93050.1| serine acetyltransferase [Allium tuberosum] 241 1e-62
gb|AAF19000.1|AF212156_1 serine acetyltransferase [Allium cepa] 241 2e-62
pir||T09140 serine O-acetyltransferase (EC 2.3.1.30) - spinach g... 237 2e-61
>emb|CAC88764.1| serine acetyltransferase 7 [Nicotiana tabacum]
Length = 300
Score = 245 bits (626), Expect = 7e-64
Identities = 119/128 (92%), Positives = 124/128 (95%)
Frame = -2
Query: 999 ATIGKGILFDHATGVVVGETXVIGNNVSILHHFTLGGTGKIGGDRHPKIGDGVLIGAGAT 820
A IGKGILFDHATGVVVGET VIGNNVSILHH TLGGTGKIGGDRHPKIGDGVLIGAGAT
Sbjct: 173 AKIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKIGGDRHPKIGDGVLIGAGAT 232
Query: 819 ILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFM 640
ILGNV+IGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKE+P+KHE+ PGESMDHTSF+
Sbjct: 233 ILGNVRIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEQPTKHEECPGESMDHTSFI 292
Query: 639 SEWSDYII 616
SEWSDYII
Sbjct: 293 SEWSDYII 300
>pir||A57478 serine O-acetyltransferase (EC 2.3.1.30) - watermelon
gi|1350550|dbj|BAA12843.1| serine acetyltransferase
[Citrullus lanatus] gi|1841312|dbj|BAA08479.1| serine
acetyltransferase. [Citrullus lanatus]
gi|2337772|dbj|BAA21827.1| serine acetyltransferase
[Citrullus lanatus]
Length = 294
Score = 242 bits (617), Expect = 7e-63
Identities = 119/128 (92%), Positives = 123/128 (95%)
Frame = -2
Query: 999 ATIGKGILFDHATGVVVGETXVIGNNVSILHHFTLGGTGKIGGDRHPKIGDGVLIGAGAT 820
A IGKGILFDHATGVVVGET VIGNNVSILHH TLGGTGK+ GDRHPKIGDGVLIGAGAT
Sbjct: 167 ARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKMCGDRHPKIGDGVLIGAGAT 226
Query: 819 ILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFM 640
ILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPS+ ED+PGESMDHTSF+
Sbjct: 227 ILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSQLEDIPGESMDHTSFI 286
Query: 639 SEWSDYII 616
SEWSDYII
Sbjct: 287 SEWSDYII 294
>dbj|BAA93050.1| serine acetyltransferase [Allium tuberosum]
Length = 289
Score = 241 bits (616), Expect = 1e-62
Identities = 116/128 (90%), Positives = 121/128 (93%)
Frame = -2
Query: 999 ATIGKGILFDHATGVVVGETXVIGNNVSILHHFTLGGTGKIGGDRHPKIGDGVLIGAGAT 820
A IGKGIL DHATGVV+GET VIGNNVSILHH TLGGTGK GGDRHPKIGDGVLIGAGAT
Sbjct: 162 ARIGKGILLDHATGVVIGETAVIGNNVSILHHVTLGGTGKAGGDRHPKIGDGVLIGAGAT 221
Query: 819 ILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFM 640
ILGN++IG GAKIGAGSVVLIDVPPRTTAVGNPARL+GGKEKPS HEDVPGESMDHTSF+
Sbjct: 222 ILGNIRIGAGAKIGAGSVVLIDVPPRTTAVGNPARLIGGKEKPSMHEDVPGESMDHTSFI 281
Query: 639 SEWSDYII 616
SEWSDYII
Sbjct: 282 SEWSDYII 289
>gb|AAF19000.1|AF212156_1 serine acetyltransferase [Allium cepa]
Length = 289
Score = 241 bits (614), Expect = 2e-62
Identities = 115/128 (89%), Positives = 121/128 (93%)
Frame = -2
Query: 999 ATIGKGILFDHATGVVVGETXVIGNNVSILHHFTLGGTGKIGGDRHPKIGDGVLIGAGAT 820
A IGKGIL DHATGVV+GET VIGNNVSILHH TLGGTGK GGDRHPKIGDGVLIGAGAT
Sbjct: 162 ARIGKGILLDHATGVVIGETAVIGNNVSILHHVTLGGTGKAGGDRHPKIGDGVLIGAGAT 221
Query: 819 ILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFM 640
ILGN++IG GAK+GAGSVVLIDVPPRTTAVGNPARL+GGKEKPS HEDVPGESMDHTSF+
Sbjct: 222 ILGNIRIGAGAKVGAGSVVLIDVPPRTTAVGNPARLIGGKEKPSVHEDVPGESMDHTSFI 281
Query: 639 SEWSDYII 616
SEWSDYII
Sbjct: 282 SEWSDYII 289
>pir||T09140 serine O-acetyltransferase (EC 2.3.1.30) - spinach
gi|1657233|dbj|BAA13634.1| serine acetyltransferase
[Spinacia oleracea] gi|1657235|dbj|BAA13635.1| serine
acetyltransferase [Spinacia oleracea]
Length = 347
Score = 237 bits (604), Expect = 2e-61
Identities = 112/128 (87%), Positives = 122/128 (94%)
Frame = -2
Query: 999 ATIGKGILFDHATGVVVGETXVIGNNVSILHHFTLGGTGKIGGDRHPKIGDGVLIGAGAT 820
A IGKGILFDHATGVV+GET +IG+N SILHH TLGGTGK GGDRHPK+GDGVLIGAGAT
Sbjct: 220 ARIGKGILFDHATGVVIGETAIIGDNCSILHHVTLGGTGKAGGDRHPKVGDGVLIGAGAT 279
Query: 819 ILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFM 640
ILGNV+IG+GAKIGAGSVVLIDVPPRTTAVGNPARL+GGKEKPS++ DVPGESMDHTSF+
Sbjct: 280 ILGNVRIGDGAKIGAGSVVLIDVPPRTTAVGNPARLIGGKEKPSQNSDVPGESMDHTSFI 339
Query: 639 SEWSDYII 616
SEWSDYII
Sbjct: 340 SEWSDYII 347
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 895,609,656
Number of Sequences: 1393205
Number of extensions: 22122102
Number of successful extensions: 88858
Number of sequences better than 10.0: 1367
Number of HSP's better than 10.0 without gapping: 68839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83417
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 57393820016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
