Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001861A_C01 KMC001861A_c01
(1449 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194482.1| putative protein; protein id: At4g27520.1, supp... 205 1e-51
gb|AAM64815.1| unknown [Arabidopsis thaliana] 204 4e-51
ref|NP_200198.1| putative protein; protein id: At5g53870.1 [Arab... 201 2e-50
emb|CAD66637.1| phytocyanin protein, PUP2 [Arabidopsis thaliana] 196 1e-48
dbj|BAB32982.1| P0489A05.2 [Oryza sativa (japonica cultivar-grou... 156 9e-37
>ref|NP_194482.1| putative protein; protein id: At4g27520.1, supported by cDNA: 33380.,
supported by cDNA: gi_13358224 [Arabidopsis thaliana]
gi|7487504|pir||T05857 hypothetical protein T29A15.10 -
Arabidopsis thaliana gi|4469003|emb|CAB38264.1| putative
protein [Arabidopsis thaliana] gi|7269606|emb|CAB81402.1|
putative protein [Arabidopsis thaliana]
gi|11762218|gb|AAG40387.1|AF325035_1 AT4g27520
[Arabidopsis thaliana] gi|23397249|gb|AAN31906.1| unknown
protein [Arabidopsis thaliana] gi|24417234|gb|AAN60227.1|
unknown [Arabidopsis thaliana]
Length = 349
Score = 205 bits (522), Expect = 1e-51
Identities = 126/311 (40%), Positives = 166/311 (52%), Gaps = 29/311 (9%)
Frame = -2
Query: 1250 WIPNPSESYTLWAGRNRFQIKDTIVFKYTKGSDSVLEVKKEDFDNCNKANPIKKFEDGDT 1071
W+ NP E+Y W+G+NRF + DT+ F Y KG+DSVLEV K D+D CN NPIK+ +DGD+
Sbjct: 39 WVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDS 98
Query: 1070 EFTFDRSGPFYFISGKDGNCEKGQKMILVVISPR------------------GTQPPP-- 951
E + DR GPFYFISG + NC+KGQK+ +VVIS R G+ PP
Sbjct: 99 EISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTPGSMTPPGG 158
Query: 950 SPPPKSSPSPSPKASPPSGSPPTAGEPSPAGTPPSVLPSPAGAPVPAGGPSAGTPPSAST 771
+ PKSS SP SPP + P G SP S SPA +P + P +G+P S +T
Sbjct: 159 AHSPKSSSPVSPTTSPPGSTTPPGGAHSPKS---SSAVSPATSPPGSMAPKSGSPVSPTT 215
Query: 770 SP-------SP-SPVSAPPAASPAPGA-ESPSSSPTSNSPAGGPTATSPSPAGDSPAGGP 618
SP SP SP SAP + PAP A +S S+ P S++P P S +P SP
Sbjct: 216 SPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAPMTSPPG-SMAPKSSSPVSNS 274
Query: 617 PAPSPTTGDTPPSASGPDVSPSGTPSSLPADTPSSSSNNSTAPPPGKPVVHAVVPSSFLH 438
P SP+ ++S P SPSG+ D PS++ + ST P G P +
Sbjct: 275 PTVSPSLAPGGSTSSSPSDSPSGSAMGPSGDGPSAAGDIST--PAGAPGQKKSSANGMTV 332
Query: 437 YSVTIVVGAAL 405
S+T V+ L
Sbjct: 333 MSITTVLSLVL 343
>gb|AAM64815.1| unknown [Arabidopsis thaliana]
Length = 344
Score = 204 bits (518), Expect = 4e-51
Identities = 125/311 (40%), Positives = 165/311 (52%), Gaps = 29/311 (9%)
Frame = -2
Query: 1250 WIPNPSESYTLWAGRNRFQIKDTIVFKYTKGSDSVLEVKKEDFDNCNKANPIKKFEDGDT 1071
W+ NP E+Y W+G+NRF + DT+ F Y KG+DSVLEV K D+D CN NPIK+ +DGD+
Sbjct: 34 WVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDS 93
Query: 1070 EFTFDRSGPFYFISGKDGNCEKGQKMILVVISPR------------------GTQPPP-- 951
E + DR GPFYFISG + NC+KGQK+ +VVIS R G+ PP
Sbjct: 94 EISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTPGSMTPPGG 153
Query: 950 SPPPKSSPSPSPKASPPSGSPPTAGEPSPAGTPPSVLPSPAGAPVPAGGPSAGTPPSAST 771
+ PKSS SP SPP + P G SP S SPA +P + P +G+P S +T
Sbjct: 154 AHSPKSSSPVSPTTSPPGSTTPPGGAHSPKS---SSAVSPATSPPGSMAPKSGSPVSPTT 210
Query: 770 SP-------SP-SPVSAPPAASPAPGA-ESPSSSPTSNSPAGGPTATSPSPAGDSPAGGP 618
P SP SP SAP + PAP A +S S+ P S++P P S +P SP
Sbjct: 211 XPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAPMTSPPG-SMAPKSSSPVSNS 269
Query: 617 PAPSPTTGDTPPSASGPDVSPSGTPSSLPADTPSSSSNNSTAPPPGKPVVHAVVPSSFLH 438
P SP+ ++S P SPSG+ D PS++ + ST P G P +
Sbjct: 270 PTVSPSLAPGGSTSSSPSDSPSGSAMGPSGDGPSAAGDIST--PAGAPGQKKSSANGMTV 327
Query: 437 YSVTIVVGAAL 405
S+T V+ L
Sbjct: 328 MSITTVLSLVL 338
>ref|NP_200198.1| putative protein; protein id: At5g53870.1 [Arabidopsis thaliana]
gi|10177249|dbj|BAB10717.1| contains similarity to
phytocyanin/early nodulin-like protein~gene_id:K19P17.3
[Arabidopsis thaliana]
Length = 370
Score = 201 bits (512), Expect = 2e-50
Identities = 133/304 (43%), Positives = 163/304 (52%), Gaps = 48/304 (15%)
Frame = -2
Query: 1250 WIPNPSESYTLWAGRNRFQIKDTIVFKYTKGSDSVLEVKKEDFDNCNKANPIKKFEDGDT 1071
W+ NP E+Y WA RNRFQ+ D++ FKY KGSDSV +V K DFD CN NPIK FE+G++
Sbjct: 38 WVTNPQENYNTWAERNRFQVNDSLYFKYAKGSDSVQQVMKADFDGCNVRNPIKNFENGES 97
Query: 1070 EFTFDRSGPFYFISGKDGNCEKGQKMILVVISPRG--TQPPPSPPPKSSPSPSPK----- 912
T DRSG FYFISG +C+KGQK+I+VV++ R + P SP P SP+ PK
Sbjct: 98 VVTLDRSGAFYFISGNQDHCQKGQKLIVVVLAVRNQPSAPAHSPVPSVSPTQPPKSHSPV 157
Query: 911 -----ASPPSGSPPTAGEPSPAGTP---------PSVLPSPAGAPVPA-GGPSAGTPPSA 777
AS PS S P SPA P P++ PS A + PA PS +P
Sbjct: 158 SPVAPASAPSKSQPPRSSVSPAQPPKSSSPISHTPALSPSHATSHSPATPSPSPKSPSPV 217
Query: 776 STSPSPSPVSAP-------PAASPAPG-----AESPSSSPT---SNSPAGGP-----TAT 657
S SPS SP P P+ SPA A +PS SP S+SPA P T
Sbjct: 218 SHSPSHSPAHTPSHSPAHTPSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHSPATPK 277
Query: 656 SPSPAGDSPAGGPPAPSPTTGDTPPSASGPDVSPSGTPS--SLP-ADTPSS---SSNNST 495
SPSP+ SPA P PSP T +P S P S PS S P A +PS +++N T
Sbjct: 278 SPSPS-SSPAQSPATPSPMTPQSPSPVSSPSPDQSAAPSDQSTPLAPSPSETTPTADNIT 336
Query: 494 APPP 483
AP P
Sbjct: 337 APAP 340
Score = 42.4 bits (98), Expect = 0.019
Identities = 27/64 (42%), Positives = 32/64 (49%), Gaps = 2/64 (3%)
Frame = -2
Query: 977 SPRGTQP--PPSPPPKSSPSPSPKASPPSGSPPTAGEPSPAGTPPSVLPSPAGAPVPAGG 804
SP P P SP P SSPSP A+P S P A PSP+ T P+ A AP P
Sbjct: 288 SPATPSPMTPQSPSPVSSPSPDQSAAPSDQSTPLA--PSPSETTPTADNITAPAPSPRTN 345
Query: 803 PSAG 792
++G
Sbjct: 346 SASG 349
Score = 40.8 bits (94), Expect = 0.055
Identities = 32/101 (31%), Positives = 44/101 (42%)
Frame = -2
Query: 740 PAASPAPGAESPSSSPTSNSPAGGPTATSPSPAGDSPAGGPPAPSPTTGDTPPSASGPDV 561
PA SP P SP+ P S+SP SP +P+ P S + PP +S P
Sbjct: 137 PAHSPVPSV-SPTQPPKSHSPV------SPVAPASAPSKSQPPRSSVSPAQPPKSSSPI- 188
Query: 560 SPSGTPSSLPADTPSSSSNNSTAPPPGKPVVHAVVPSSFLH 438
S PA +PS ++++S A P P + V S H
Sbjct: 189 ------SHTPALSPSHATSHSPATPSPSPKSPSPVSHSPSH 223
>emb|CAD66637.1| phytocyanin protein, PUP2 [Arabidopsis thaliana]
Length = 370
Score = 196 bits (497), Expect = 1e-48
Identities = 132/304 (43%), Positives = 161/304 (52%), Gaps = 48/304 (15%)
Frame = -2
Query: 1250 WIPNPSESYTLWAGRNRFQIKDTIVFKYTKGSDSVLEVKKEDFDNCNKANPIKKFEDGDT 1071
W+ NP E+Y WA RNRFQ+ D+ FKY K SDSV +V K DFD CN NPIK FE+G++
Sbjct: 38 WVTNPQENYNTWAERNRFQVNDSPYFKYAKRSDSVQQVMKADFDGCNARNPIKNFENGES 97
Query: 1070 EFTFDRSGPFYFISGKDGNCEKGQKMILVVISPRG--TQPPPSPPPKSSPSPSPK----- 912
T DRSG FYFISG +C+KGQK+I+VV++ R + P SP P SP+ PK
Sbjct: 98 VVTLDRSGAFYFISGNQDHCQKGQKLIVVVLAVRNQPSAPAHSPVPSVSPTQPPKSHSPV 157
Query: 911 -----ASPPSGSPPTAGEPSPAGTPPSVLP---SPAGAPVPAGGPSAGTPPSASTSPSP- 759
AS PS S P SPA P S P +PA +P A S TP + SPSP
Sbjct: 158 SPVAPASAPSKSQPPRSSVSPAQPPKSSSPISHTPALSPSHATSHSPATPSPSPKSPSPV 217
Query: 758 --SPVSAP---PAASPA-----PGAESPSSSPT---SNSPAGGP-------------TAT 657
SP +P P+ SPA A +PS SP S+SPA P T
Sbjct: 218 SHSPSHSPAHTPSHSPAHTPSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSXSHSPATPK 277
Query: 656 SPSPAGDSPAGGPPAPSPTTGDTPPSASGPDVSPSGTPS--SLP-ADTPSS---SSNNST 495
SPSP+ SPA P PSP T +P S P S PS S P A +PS +++N T
Sbjct: 278 SPSPS-SSPAQSPATPSPMTPQSPSPVSSPSPDQSAAPSDQSTPLAPSPSETTPTADNIT 336
Query: 494 APPP 483
AP P
Sbjct: 337 APAP 340
Score = 42.4 bits (98), Expect = 0.019
Identities = 27/64 (42%), Positives = 32/64 (49%), Gaps = 2/64 (3%)
Frame = -2
Query: 977 SPRGTQP--PPSPPPKSSPSPSPKASPPSGSPPTAGEPSPAGTPPSVLPSPAGAPVPAGG 804
SP P P SP P SSPSP A+P S P A PSP+ T P+ A AP P
Sbjct: 288 SPATPSPMTPQSPSPVSSPSPDQSAAPSDQSTPLA--PSPSETTPTADNITAPAPSPRTN 345
Query: 803 PSAG 792
++G
Sbjct: 346 SASG 349
Score = 40.8 bits (94), Expect = 0.055
Identities = 32/101 (31%), Positives = 44/101 (42%)
Frame = -2
Query: 740 PAASPAPGAESPSSSPTSNSPAGGPTATSPSPAGDSPAGGPPAPSPTTGDTPPSASGPDV 561
PA SP P SP+ P S+SP SP +P+ P S + PP +S P
Sbjct: 137 PAHSPVPSV-SPTQPPKSHSPV------SPVAPASAPSKSQPPRSSVSPAQPPKSSSPI- 188
Query: 560 SPSGTPSSLPADTPSSSSNNSTAPPPGKPVVHAVVPSSFLH 438
S PA +PS ++++S A P P + V S H
Sbjct: 189 ------SHTPALSPSHATSHSPATPSPSPKSPSPVSHSPSH 223
>dbj|BAB32982.1| P0489A05.2 [Oryza sativa (japonica cultivar-group)]
gi|20804529|dbj|BAB92223.1| B1015E06.24 [Oryza sativa
(japonica cultivar-group)]
Length = 254
Score = 156 bits (394), Expect = 9e-37
Identities = 93/221 (42%), Positives = 121/221 (54%), Gaps = 6/221 (2%)
Frame = -2
Query: 1250 WIPNPSESYTLWAGRNRFQIKDTIVFKYTKGSDSVLEVKKEDFDNCNKANPIKKFEDGDT 1071
W NP+E Y WA RNRFQ+ D +VF+Y K DSV+ V + +D CN +P+ + GD+
Sbjct: 41 WTTNPAEPYNRWAERNRFQVNDRLVFRYNK-EDSVVVVSQGHYDGCNATDPLLRDAGGDS 99
Query: 1070 EFTFDRSGPFYFISGKDGNCEKGQKMILVVISPRG------TQPPPSPPPKSSPSPSPKA 909
F FD SGPF+FISG C+ G+++I+VV++ RG T P P PPP +P+P+
Sbjct: 100 TFVFDSSGPFFFISGDPARCQAGERLIVVVLAVRGNATATPTTPSPPPPPTVPAAPTPRP 159
Query: 908 SPPSGSPPTAGEPSPAGTPPSVLPSPAGAPVPAGGPSAGTPPSASTSPSPSPVSAPPAAS 729
SPP PP AG A P SP PVPA P AG+PP P P P
Sbjct: 160 SPP---PPAAGTNGTARAP-----SP---PVPAPAP-AGSPP-----PPPPP-------- 194
Query: 728 PAPGAESPSSSPTSNSPAGGPTATSPSPAGDSPAGGPPAPS 606
PA G + T+ SPAGG T+P+P + A PP PS
Sbjct: 195 PAGG------NFTAPSPAGGMNFTAPAPGTNGTAAPPPRPS 229
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,487,489,216
Number of Sequences: 1393205
Number of extensions: 47531515
Number of successful extensions: 1182793
Number of sequences better than 10.0: 26991
Number of HSP's better than 10.0 without gapping: 209143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589740
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 96472035260
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
