Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001855A_C01 KMC001855A_c01
(1033 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK63248.1|AF367434_1 phosphatidylinositol transfer-like prot... 249 5e-65
gb|AAC49692.1| late nodulin Nlj16 [Lotus japonicus] 247 3e-64
gb|AAK64378.1|AF366901_1 phosphatidylinositol transfer-like prot... 119 1e-25
ref|NP_179410.1| putative phosphatidylinositol/phophatidylcholin... 114 2e-24
pir||G85430 hypothetical protein AT4g36490 [imported] - Arabidop... 109 8e-23
>gb|AAK63248.1|AF367434_1 phosphatidylinositol transfer-like protein IV [Lotus japonicus]
Length = 482
Score = 249 bits (636), Expect = 5e-65
Identities = 127/127 (100%), Positives = 127/127 (100%)
Frame = -1
Query: 871 QVPAAKLSKNVDVIPVAIPVGVPVAVPAADKNASKKVGQNDTTSKEFTTVMKRMAELEEK 692
QVPAAKLSKNVDVIPVAIPVGVPVAVPAADKNASKKVGQNDTTSKEFTTVMKRMAELEEK
Sbjct: 356 QVPAAKLSKNVDVIPVAIPVGVPVAVPAADKNASKKVGQNDTTSKEFTTVMKRMAELEEK 415
Query: 691 MTTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEKKKQK 512
MTTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEKKKQK
Sbjct: 416 MTTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEKKKQK 475
Query: 511 KKTFFCC 491
KKTFFCC
Sbjct: 476 KKTFFCC 482
>gb|AAC49692.1| late nodulin Nlj16 [Lotus japonicus]
Length = 141
Score = 247 bits (631), Expect(2) = 3e-64
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = -1
Query: 868 VPAAKLSKNVDVIPVAIPVGVPVAVPAADKNASKKVGQNDTTSKEFTTVMKRMAELEEKM 689
VPAAKLSKNVDVIPVAIPVGVPVAVPAADKNASKKVGQNDTTSKEFTTVMKRMAELEEKM
Sbjct: 16 VPAAKLSKNVDVIPVAIPVGVPVAVPAADKNASKKVGQNDTTSKEFTTVMKRMAELEEKM 75
Query: 688 TTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEKKKQKK 509
TTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEKKKQKK
Sbjct: 76 TTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEKKKQKK 135
Query: 508 KTFFCC 491
KTFFCC
Sbjct: 136 KTFFCC 141
Score = 21.2 bits (43), Expect(2) = 3e-64
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 1001 VGPSEHIE 978
VGPSEHIE
Sbjct: 7 VGPSEHIE 14
>gb|AAK64378.1|AF366901_1 phosphatidylinositol transfer-like protein II [Lotus japonicus]
Length = 550
Score = 119 bits (297), Expect = 1e-25
Identities = 62/82 (75%), Positives = 70/82 (84%)
Frame = -1
Query: 745 TSKEFTTVMKRMAELEEKMTTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALED 566
+++EF TVMKRMAELEEKM MN+ MPPEKEEMLNA ISRAD LE++LM TKKALED
Sbjct: 467 SAQEFMTVMKRMAELEEKMGNMNYNTC-MPPEKEEMLNAAISRADALEQELMSTKKALED 525
Query: 565 SLAKQEVLSAYVEKKKQKKKTF 500
SLAKQE LSAY+EKKK+KKK F
Sbjct: 526 SLAKQEELSAYIEKKKKKKKLF 547
>ref|NP_179410.1| putative phosphatidylinositol/phophatidylcholine transfer protein;
protein id: At2g18180.1 [Arabidopsis thaliana]
gi|25411836|pir||C84561 hypothetical protein At2g18180
[imported] - Arabidopsis thaliana
gi|4874285|gb|AAD31348.1| putative
phosphatidylinositol/phophatidylcholine transfer protein
[Arabidopsis thaliana]
Length = 558
Score = 114 bits (285), Expect = 2e-24
Identities = 57/88 (64%), Positives = 71/88 (79%)
Frame = -1
Query: 769 KKVGQNDTTSKEFTTVMKRMAELEEKMTTMNHQPATMPPEKEEMLNATISRADVLEKQLM 590
KK+ + ++F VMKRMAELE+K+T ++ QPATMPPEKEEMLNA ISRAD LE++L
Sbjct: 454 KKMATTTISGEDFMAVMKRMAELEQKVTNLSAQPATMPPEKEEMLNAAISRADFLEQELA 513
Query: 589 DTKKALEDSLAKQEVLSAYVEKKKQKKK 506
TKKAL+DSL +QE L AYVE+KK+KKK
Sbjct: 514 ATKKALDDSLTRQEDLVAYVERKKKKKK 541
>pir||G85430 hypothetical protein AT4g36490 [imported] - Arabidopsis thaliana
gi|4006913|emb|CAB16843.1| hypothetical protein
[Arabidopsis thaliana] gi|7270597|emb|CAB80315.1|
hypothetical protein [Arabidopsis thaliana]
Length = 558
Score = 109 bits (272), Expect = 8e-23
Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 5/128 (3%)
Frame = -1
Query: 868 VPAAKLSKNVD-VIPVAIPVGVPVAVPAADKNASKKVGQNDT----TSKEFTTVMKRMAE 704
V K++KNV + + PV A N S + T + ++F +MKRMAE
Sbjct: 428 VTMIKVTKNVPRKLTESTLYSSPVYCDDASMNKSAMQSEKMTVPAISGEDFMAIMKRMAE 487
Query: 703 LEEKMTTMNHQPATMPPEKEEMLNATISRADVLEKQLMDTKKALEDSLAKQEVLSAYVEK 524
LE+K+T ++ QP MPP+KEEMLNA ISR++VLE++L TKKAL+DSL +QE L AY+EK
Sbjct: 488 LEQKVTVLSAQPTVMPPDKEEMLNAAISRSNVLEQELAATKKALDDSLGRQEELVAYIEK 547
Query: 523 KKQKKKTF 500
KK+KKK F
Sbjct: 548 KKKKKKLF 555
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 861,409,704
Number of Sequences: 1393205
Number of extensions: 19069264
Number of successful extensions: 48013
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 44560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47844
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 60429070113
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
