Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001847A_C01 KMC001847A_c01
(755 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB43602.1| phosphoribosyl pyrophosphate synthase isozyme 4 ... 80 3e-14
ref|NP_181819.1| putative ribose phosphate pyrophosphokinase; pr... 77 2e-13
gb|AAN04491.1| phosphoribosyl pyrophosphate synthetase [Saccharu... 76 5e-13
emb|CAB43601.1| phosphoribosyl pyrophosphate synthase isozyme 3 ... 75 8e-13
ref|NP_172540.1| phosphoribosyl diphosphate synthase; protein id... 75 8e-13
>emb|CAB43602.1| phosphoribosyl pyrophosphate synthase isozyme 4 [Spinacia oleracea]
Length = 318
Score = 80.1 bits (196), Expect = 3e-14
Identities = 44/63 (69%), Positives = 49/63 (76%), Gaps = 1/63 (1%)
Frame = -2
Query: 328 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSF-K*KEEGDVTTAFTLARML 152
FLA SSP FEQ + IYAL LFVASF LV PFFPTGSF + +EEGDV TAFT+AR+L
Sbjct: 63 FLAAFSSPAVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIL 122
Query: 151 SNI 143
SNI
Sbjct: 123 SNI 125
>ref|NP_181819.1| putative ribose phosphate pyrophosphokinase; protein id:
At2g42910.1, supported by cDNA: 35051. [Arabidopsis
thaliana] gi|25529014|pir||T52589 ribose-phosphate
diphosphokinase (EC 2.7.6.1) [imported] - Arabidopsis
thaliana gi|4512664|gb|AAD21718.1| putative ribose
phosphate pyrophosphokinase [Arabidopsis thaliana]
gi|4902472|emb|CAB43553.1| phosphoribosyl diphosphate
synthase [Arabidopsis thaliana]
gi|20197872|gb|AAM15296.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|21593006|gb|AAM64955.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|22136046|gb|AAM91605.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
gi|23197750|gb|AAN15402.1| putative ribose phosphate
pyrophosphokinase [Arabidopsis thaliana]
Length = 337
Score = 77.4 bits (189), Expect = 2e-13
Identities = 42/63 (66%), Positives = 48/63 (75%), Gaps = 1/63 (1%)
Frame = -2
Query: 328 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSF-K*KEEGDVTTAFTLARML 152
FLA SSP FEQ + IY L LFVASF LV PFFPTGSF + +EEGDV TAFT+AR++
Sbjct: 82 FLASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIV 141
Query: 151 SNI 143
SNI
Sbjct: 142 SNI 144
>gb|AAN04491.1| phosphoribosyl pyrophosphate synthetase [Saccharum hybrid cultivar]
Length = 328
Score = 76.3 bits (186), Expect = 5e-13
Identities = 42/63 (66%), Positives = 48/63 (75%), Gaps = 1/63 (1%)
Frame = -2
Query: 328 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSF-K*KEEGDVTTAFTLARML 152
FLA SSP FEQ + I+AL LF+ASF LV PFFPTGSF + +EEGDV TAFTLAR+L
Sbjct: 72 FLASFSSPAVIFEQISVIFALPKLFIASFTLVLPFFPTGSFERVEEEGDVATAFTLARIL 131
Query: 151 SNI 143
S I
Sbjct: 132 SMI 134
>emb|CAB43601.1| phosphoribosyl pyrophosphate synthase isozyme 3 [Spinacia oleracea]
Length = 406
Score = 75.5 bits (184), Expect = 8e-13
Identities = 43/63 (68%), Positives = 48/63 (75%), Gaps = 1/63 (1%)
Frame = -2
Query: 328 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTG-SFK*KEEGDVTTAFTLARML 152
FLA SSP FEQ + IYAL LFVASF LV PFFPTG S + ++EGDV TAFTLAR+L
Sbjct: 150 FLASFSSPGVIFEQLSVIYALPKLFVASFKLVLPFFPTGTSERMEDEGDVATAFTLARIL 209
Query: 151 SNI 143
SNI
Sbjct: 210 SNI 212
>ref|NP_172540.1| phosphoribosyl diphosphate synthase; protein id: At1g10700.1,
supported by cDNA: gi_16604385, supported by cDNA:
gi_19699209 [Arabidopsis thaliana]
gi|16604386|gb|AAL24199.1| At1g10700/F20B24.13
[Arabidopsis thaliana] gi|19699210|gb|AAL90971.1|
At1g10700/F20B24.13 [Arabidopsis thaliana]
Length = 411
Score = 75.5 bits (184), Expect = 8e-13
Identities = 42/63 (66%), Positives = 48/63 (75%), Gaps = 1/63 (1%)
Frame = -2
Query: 328 FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTG-SFK*KEEGDVTTAFTLARML 152
FLA SSP FEQ + IYAL LFV+SF LV PFFPTG S + ++EGDV TAFTLAR+L
Sbjct: 155 FLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARIL 214
Query: 151 SNI 143
SNI
Sbjct: 215 SNI 217
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 653,605,651
Number of Sequences: 1393205
Number of extensions: 14501428
Number of successful extensions: 37016
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 35550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36890
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36877108757
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
