Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001846A_C01 KMC001846A_c01
(647 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO72565.1| inositol phosphatase-like protein [Oryza sativa (... 153 2e-36
gb|AAM64943.1| unknown [Arabidopsis thaliana] 150 1e-35
ref|NP_565491.1| expressed protein; protein id: At2g20890.1, sup... 149 2e-35
ref|NP_484690.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 55 1e-06
ref|ZP_00073147.1| hypothetical protein [Trichodesmium erythraeu... 54 2e-06
>gb|AAO72565.1| inositol phosphatase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 287
Score = 153 bits (386), Expect = 2e-36
Identities = 74/91 (81%), Positives = 84/91 (91%)
Frame = -2
Query: 646 GKGDFSYSRFFAIGLFRLLELGNAMEPAILEKLCAALNVDKRSVDRDLDVYRNLLSKLVQ 467
GKG FSYSRFFA+GLFRLLEL NA EP IL+KLCAALN++KRSVDRDLDVYRN+LSKLVQ
Sbjct: 187 GKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNILSKLVQ 246
Query: 466 AKELLKEYADREKKKQEERAEPQKANEAITK 374
AKELLKEY +REKKK+EER+E K+NEA+TK
Sbjct: 247 AKELLKEYVEREKKKREERSETPKSNEAVTK 277
>gb|AAM64943.1| unknown [Arabidopsis thaliana]
Length = 300
Score = 150 bits (379), Expect = 1e-35
Identities = 72/98 (73%), Positives = 86/98 (87%)
Frame = -2
Query: 643 KGDFSYSRFFAIGLFRLLELGNAMEPAILEKLCAALNVDKRSVDRDLDVYRNLLSKLVQA 464
K FSYSRFFA+GLFRLLEL +A +P +L+KLCA+LN++K+SVDRDLDVYRNLLSKLVQA
Sbjct: 194 KEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQA 253
Query: 463 KELLKEYADREKKKQEERAEPQKANEAITKCLGQEQFS 350
ELLKEY +REKKKQEERA+ QKANE I+KCLG ++
Sbjct: 254 NELLKEYVEREKKKQEERAQSQKANETISKCLGDTLYN 291
>ref|NP_565491.1| expressed protein; protein id: At2g20890.1, supported by cDNA:
34875., supported by cDNA: gi_17065445, supported by
cDNA: gi_20148534 [Arabidopsis thaliana]
gi|25412000|pir||F84594 hypothetical protein At2g20890
[imported] - Arabidopsis thaliana
gi|4454459|gb|AAD20906.1| expressed protein [Arabidopsis
thaliana] gi|17065446|gb|AAL32877.1| Unknown protein
[Arabidopsis thaliana] gi|20148535|gb|AAM10158.1|
unknown protein [Arabidopsis thaliana]
Length = 300
Score = 149 bits (377), Expect = 2e-35
Identities = 72/98 (73%), Positives = 86/98 (87%)
Frame = -2
Query: 643 KGDFSYSRFFAIGLFRLLELGNAMEPAILEKLCAALNVDKRSVDRDLDVYRNLLSKLVQA 464
K FSYSRFFA+GLFRLLEL +A +P +L+KLCA+LN++K+SVDRDLDVYRNLLSKLVQA
Sbjct: 194 KEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQA 253
Query: 463 KELLKEYADREKKKQEERAEPQKANEAITKCLGQEQFS 350
KELLKEY +REKKKQ ERA+ QKANE I+KCLG ++
Sbjct: 254 KELLKEYVEREKKKQGERAQSQKANETISKCLGDTLYN 291
>ref|NP_484690.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25381738|pir||AE1887
hypothetical protein all0646 [imported] - Nostoc sp.
(strain PCC 7120) gi|17129992|dbj|BAB72604.1|
ORF_ID:all0646~hypothetical protein [Nostoc sp. PCC
7120]
Length = 233
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Frame = -2
Query: 637 DFSYSRFFAIGLFRLLELGNA-------MEPAILEKLCAALNVDKRSVDRDLDVYRNLLS 479
+F YSR FAIGLF LLE N L+ + A L++ +DL++YR+ L
Sbjct: 138 NFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKSIAAGLHLSDDKFSKDLELYRSNLD 197
Query: 478 KLVQAKELLKEYADREKKKQEERAE 404
K+ QA ++ + ++KK+E+R +
Sbjct: 198 KMTQALAVMADMLTADRKKREQRQQ 222
>ref|ZP_00073147.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 239
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/83 (33%), Positives = 50/83 (59%), Gaps = 7/83 (8%)
Frame = -2
Query: 634 FSYSRFFAIGLFRLLELGNA-------MEPAILEKLCAALNVDKRSVDRDLDVYRNLLSK 476
F YSR FAIGLF LLE+ + L+K+C +LN+ + + +D+D+Y + L +
Sbjct: 139 FRYSRLFAIGLFTLLEIVDTELIKEQEKRTEALKKICQSLNLVEEKLLKDIDLYLSNLER 198
Query: 475 LVQAKELLKEYADREKKKQEERA 407
+ QA+ +++ +KK+E+R+
Sbjct: 199 VAQARSAMEDTLAAMRKKREKRS 221
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,933,082
Number of Sequences: 1393205
Number of extensions: 11264798
Number of successful extensions: 31366
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 29813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31255
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27576232529
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
