Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001840A_C01 KMC001840A_c01
(579 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA06819.1| cysteine synthase, O-acetyl-L-serine (thiol)-lya... 161 5e-39
gb|AAL66291.1|AF452451_1 cysteine synthase [Glycine max] 160 1e-38
sp|Q43317|CYSK_CITLA Cysteine synthase (O-acetylserine sulfhydry... 151 6e-36
sp|Q00834|CYSK_SPIOL Cysteine synthase (O-acetylserine sulfhydry... 149 3e-35
sp|O81154|CYSK_SOLTU Cysteine synthase (O-acetylserine sulfhydry... 149 3e-35
>emb|CAA06819.1| cysteine synthase, O-acetyl-L-serine (thiol)-lyase [Cicer
arietinum]
Length = 266
Score = 161 bits (408), Expect = 5e-39
Identities = 85/89 (95%), Positives = 89/89 (99%)
Frame = -1
Query: 579 GVLDVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIV 400
GVL+VNL+DEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIV
Sbjct: 177 GVLEVNLIDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIV 236
Query: 399 VVFPSFGERYLSSVLFESVRREAESMTFE 313
VVFPSFGERYLSSVLFESVRR+AE+MTFE
Sbjct: 237 VVFPSFGERYLSSVLFESVRRQAETMTFE 265
>gb|AAL66291.1|AF452451_1 cysteine synthase [Glycine max]
Length = 325
Score = 160 bits (404), Expect = 1e-38
Identities = 85/89 (95%), Positives = 87/89 (97%)
Frame = -1
Query: 579 GVLDVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIV 400
GVL+VNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAA +IAKRPENAGKLIV
Sbjct: 236 GVLEVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAFQIAKRPENAGKLIV 295
Query: 399 VVFPSFGERYLSSVLFESVRREAESMTFE 313
VFPSFGERYLSSVLFESVRREAESMTFE
Sbjct: 296 AVFPSFGERYLSSVLFESVRREAESMTFE 324
>sp|Q43317|CYSK_CITLA Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase) (OAS-TL) gi|1071911|pir||S46438
cysteine synthase (EC 4.2.99.8) - watermelon
gi|540497|dbj|BAA05965.1| cysteine synthase [Citrullus
lanatus]
Length = 325
Score = 151 bits (381), Expect = 6e-36
Identities = 78/89 (87%), Positives = 85/89 (94%)
Frame = -1
Query: 579 GVLDVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIV 400
GVLDVNLLDEVIQ+SS+E+IETAKLLALKEGL VGISSGAAAAAAI+IAKRPENAGKLIV
Sbjct: 236 GVLDVNLLDEVIQVSSEESIETAKLLALKEGLLVGISSGAAAAAAIRIAKRPENAGKLIV 295
Query: 399 VVFPSFGERYLSSVLFESVRREAESMTFE 313
VFPSFGERYLS+VLFESV+RE E+M FE
Sbjct: 296 AVFPSFGERYLSTVLFESVKRETENMVFE 324
>sp|Q00834|CYSK_SPIOL Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase A) (OAS-TL A)
gi|421796|pir||S35094 cysteine synthase (EC 4.2.99.8) A
- spinach gi|218277|dbj|BAA01279.1|
O-acetylserine(thiol) lyase [Spinacia oleracea]
Length = 325
Score = 149 bits (375), Expect = 3e-35
Identities = 76/90 (84%), Positives = 85/90 (94%)
Frame = -1
Query: 579 GVLDVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIV 400
GVLDVN++DEV+QISS+E+IE AKLLALKEGL VGISSGAAAAAAIK+AKRPENAGKLIV
Sbjct: 236 GVLDVNIIDEVVQISSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIV 295
Query: 399 VVFPSFGERYLSSVLFESVRREAESMTFET 310
VFPSFGERYLSSVLF+SVR+EAESM E+
Sbjct: 296 AVFPSFGERYLSSVLFDSVRKEAESMVIES 325
>sp|O81154|CYSK_SOLTU Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A)
gi|7436946|pir||T07001 cysteine synthase (EC 4.2.99.8),
cytosolic - potato gi|3290020|gb|AAC25635.1| cysteine
synthase; CS-A; O-acetylserine (thiol) lyase; cytosolic
isoform [Solanum tuberosum]
Length = 325
Score = 149 bits (375), Expect = 3e-35
Identities = 75/89 (84%), Positives = 86/89 (96%)
Frame = -1
Query: 579 GVLDVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIV 400
GVL+VNL+D+V+Q+SS+E+IE AKLLALKEGL VGISSGAAAAAAIK+AKRPENAGKLIV
Sbjct: 236 GVLEVNLIDDVVQVSSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIV 295
Query: 399 VVFPSFGERYLSSVLFESVRREAESMTFE 313
V+FPSFGERYLSSVLFE+VRREAE+MT E
Sbjct: 296 VIFPSFGERYLSSVLFETVRREAENMTVE 324
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,674,752
Number of Sequences: 1393205
Number of extensions: 9015051
Number of successful extensions: 20538
Number of sequences better than 10.0: 476
Number of HSP's better than 10.0 without gapping: 19834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20439
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
