Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001838A_C01 KMC001838A_c01
(639 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P37830|G6PD_SOLTU Glucose-6-phosphate 1-dehydrogenase, cytopl... 257 1e-67
emb|CAA04992.1| glucose-6-phosphate dehydrogenase [Nicotiana tab... 256 1e-67
gb|AAD11426.1| cytoplasmic glucose-6-phosphate 1-dehydrogenase [... 256 2e-67
sp|Q42919|G6PD_MEDSA Glucose-6-phosphate 1-dehydrogenase, cytopl... 255 3e-67
emb|CAA04993.1| glucose-6-phosphate dehydrogenase [Nicotiana tab... 253 2e-66
>sp|P37830|G6PD_SOLTU Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD)
gi|2129985|pir||S60287 glucose-6-phosphate
1-dehydrogenase (EC 1.1.1.49) - potato
gi|471345|emb|CAA52442.1| glucose-6-phosphate
1-dehydrogenase [Solanum tuberosum]
Length = 511
Score = 257 bits (656), Expect = 1e-67
Identities = 121/137 (88%), Positives = 131/137 (95%)
Frame = -2
Query: 638 DIFRCKKQGRNELVIRLQPLEAIYMKLTVKQPGLEMSTVQSELDLSYKQRYQGMIIPEAY 459
DIFRC+KQGRNE VIRLQP EA+YMKLTVK+PGLEMSTVQSELDLSY QRYQG++IPEAY
Sbjct: 375 DIFRCQKQGRNEFVIRLQPSEAMYMKLTVKKPGLEMSTVQSELDLSYGQRYQGVVIPEAY 434
Query: 458 ERLILDTIRGDQQHFVRRDELKASWKIFTPLLHKIDRGEFKPIPYKPGSRGPAEADQLLE 279
ERLILDTIRGDQQHFVRRDELKA+W+IFTPLLH+ID GE KPIPYKPGSRGPAEAD+LL+
Sbjct: 435 ERLILDTIRGDQQHFVRRDELKAAWEIFTPLLHRIDNGEVKPIPYKPGSRGPAEADELLQ 494
Query: 278 KAGYVQTHGYIWIPPTL 228
AGYVQTHGYIWIPPTL
Sbjct: 495 NAGYVQTHGYIWIPPTL 511
>emb|CAA04992.1| glucose-6-phosphate dehydrogenase [Nicotiana tabacum]
Length = 510
Score = 256 bits (655), Expect = 1e-67
Identities = 121/137 (88%), Positives = 130/137 (94%)
Frame = -2
Query: 638 DIFRCKKQGRNELVIRLQPLEAIYMKLTVKQPGLEMSTVQSELDLSYKQRYQGMIIPEAY 459
DIFRCKKQGRNE VIRLQP EA+YMKLTVK+PGLEMSTVQSELDLSY QRYQG++IPEAY
Sbjct: 374 DIFRCKKQGRNEFVIRLQPSEAMYMKLTVKKPGLEMSTVQSELDLSYGQRYQGVVIPEAY 433
Query: 458 ERLILDTIRGDQQHFVRRDELKASWKIFTPLLHKIDRGEFKPIPYKPGSRGPAEADQLLE 279
ERLILDTIRGDQQHFVRRDELKA+W+IFTPLLH+ID GE KPIPYKPGSRGPAEAD+LL+
Sbjct: 434 ERLILDTIRGDQQHFVRRDELKAAWEIFTPLLHRIDDGEIKPIPYKPGSRGPAEADELLQ 493
Query: 278 KAGYVQTHGYIWIPPTL 228
GYVQTHGYIWIPPTL
Sbjct: 494 NVGYVQTHGYIWIPPTL 510
>gb|AAD11426.1| cytoplasmic glucose-6-phosphate 1-dehydrogenase [Mesembryanthemum
crystallinum]
Length = 516
Score = 256 bits (653), Expect = 2e-67
Identities = 119/137 (86%), Positives = 131/137 (94%)
Frame = -2
Query: 638 DIFRCKKQGRNELVIRLQPLEAIYMKLTVKQPGLEMSTVQSELDLSYKQRYQGMIIPEAY 459
DIF+C KQGRNE VIRLQP EA+YMKLTVKQPGLEMST+QSELDLSY QRYQG++IPEAY
Sbjct: 380 DIFKCNKQGRNEFVIRLQPSEALYMKLTVKQPGLEMSTIQSELDLSYGQRYQGVVIPEAY 439
Query: 458 ERLILDTIRGDQQHFVRRDELKASWKIFTPLLHKIDRGEFKPIPYKPGSRGPAEADQLLE 279
ERLILDTI+GDQQHFVRRDELKA+W+IFTPLLH+ID+GEFKPI YKPG+RGPAEAD+LL
Sbjct: 440 ERLILDTIKGDQQHFVRRDELKAAWEIFTPLLHRIDKGEFKPISYKPGTRGPAEADELLA 499
Query: 278 KAGYVQTHGYIWIPPTL 228
KAGYVQTHGYIWIPPTL
Sbjct: 500 KAGYVQTHGYIWIPPTL 516
>sp|Q42919|G6PD_MEDSA Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD)
gi|1362053|pir||S57785 glucose-6-phosphate
1-dehydrogenase (EC 1.1.1.49) - alfalfa
gi|603219|gb|AAB41552.1| glucose-6-phosphate
dehydrogenase
Length = 515
Score = 255 bits (652), Expect = 3e-67
Identities = 124/137 (90%), Positives = 128/137 (92%)
Frame = -2
Query: 638 DIFRCKKQGRNELVIRLQPLEAIYMKLTVKQPGLEMSTVQSELDLSYKQRYQGMIIPEAY 459
DIFR KKQGRNE VIRLQP EAIYMKLTVKQPGLEMS VQSELDLSY QRYQG+ IPEAY
Sbjct: 379 DIFRSKKQGRNEFVIRLQPSEAIYMKLTVKQPGLEMSAVQSELDLSYGQRYQGITIPEAY 438
Query: 458 ERLILDTIRGDQQHFVRRDELKASWKIFTPLLHKIDRGEFKPIPYKPGSRGPAEADQLLE 279
ERLILDTIRGDQQHFVRRDELKASW+IFTPLLHKIDRGE KP+PY PGSRGPAEAD+LLE
Sbjct: 439 ERLILDTIRGDQQHFVRRDELKASWQIFTPLLHKIDRGELKPVPYNPGSRGPAEADELLE 498
Query: 278 KAGYVQTHGYIWIPPTL 228
KAGYVQT GYIWIPPTL
Sbjct: 499 KAGYVQTPGYIWIPPTL 515
>emb|CAA04993.1| glucose-6-phosphate dehydrogenase [Nicotiana tabacum]
Length = 511
Score = 253 bits (645), Expect = 2e-66
Identities = 120/137 (87%), Positives = 130/137 (94%)
Frame = -2
Query: 638 DIFRCKKQGRNELVIRLQPLEAIYMKLTVKQPGLEMSTVQSELDLSYKQRYQGMIIPEAY 459
DIFRCKKQGRNE VIRLQP EA+YMKLTVK+PGLEMSTVQSELDLSY+QRYQG++IPEAY
Sbjct: 375 DIFRCKKQGRNEFVIRLQPSEAMYMKLTVKKPGLEMSTVQSELDLSYRQRYQGVVIPEAY 434
Query: 458 ERLILDTIRGDQQHFVRRDELKASWKIFTPLLHKIDRGEFKPIPYKPGSRGPAEADQLLE 279
ERLILDTIRGDQQHFVRRDELKA+W+IFTPLLH+ID GE KPIPYKPGSRGPAEAD+LL+
Sbjct: 435 ERLILDTIRGDQQHFVRRDELKAAWEIFTPLLHRIDDGEVKPIPYKPGSRGPAEADELLQ 494
Query: 278 KAGYVQTHGYIWIPPTL 228
GYVQTHGYI IPPTL
Sbjct: 495 NVGYVQTHGYICIPPTL 511
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 541,514,210
Number of Sequences: 1393205
Number of extensions: 11582026
Number of successful extensions: 29632
Number of sequences better than 10.0: 279
Number of HSP's better than 10.0 without gapping: 28600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29424
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
