Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001831A_C02 KMC001831A_c02
(733 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max] 92 8e-18
ref|NP_195185.1| bZIP family transcription factor; protein id: A... 60 2e-08
ref|NP_177672.1| bZIP transcription factor ATB2, putative; prote... 59 7e-08
emb|CAA68078.1| bZIP transcription factor [Arabidopsis thaliana]... 59 7e-08
gb|AAD21199.1| putative bZIP DNA-binding protein [Capsicum chine... 54 2e-06
>gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max]
Length = 166
Score = 92.0 bits (227), Expect = 8e-18
Identities = 53/82 (64%), Positives = 61/82 (73%), Gaps = 11/82 (13%)
Frame = -2
Query: 732 LSVEAENSVLRAQMGELSNRLESLNEIIEVLNANS------AAFGTTFTEPSNG-----F 586
LSVEAENSVLRAQ+GELS+RLESLNEI++VLNA + AA +TF EP N F
Sbjct: 84 LSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTTVAGFGAAASSTFVEPMNNNNNSFF 143
Query: 585 FFNPLSMSYLNQQIMPSADMLQ 520
FNPL+M YLNQ IM SAD+LQ
Sbjct: 144 NFNPLNMGYLNQPIMASADILQ 165
>ref|NP_195185.1| bZIP family transcription factor; protein id: At4g34590.1
[Arabidopsis thaliana] gi|7488379|pir||T05279
transcription factor ATB2 - Arabidopsis thaliana
gi|3096928|emb|CAA18838.1| bZIP transcription factor
ATB2 [Arabidopsis thaliana] gi|7270409|emb|CAB80176.1|
bZIP transcription factor ATB2 [Arabidopsis thaliana]
gi|17381046|gb|AAL36335.1| putative bZIP transcription
factor ATB2 [Arabidopsis thaliana]
gi|20465863|gb|AAM20036.1| putative bZIP transcription
factor ATB2 [Arabidopsis thaliana]
Length = 159
Score = 60.5 bits (145), Expect = 2e-08
Identities = 37/79 (46%), Positives = 52/79 (64%), Gaps = 9/79 (11%)
Frame = -2
Query: 732 LSVEAENSVLRAQMGELSNRLESLNEIIEVLNANSAAFGTTFTEPSN--------GFFFN 577
L+VEAENSVLRAQ+ EL++RL+SLN+IIE L++++ SN FF N
Sbjct: 79 LTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNNNNMGMCSNPLVGLECDDFFVN 138
Query: 576 PLSMSY-LNQQIMPSADML 523
++MSY +NQ +M S+D L
Sbjct: 139 QMNMSYIMNQPLMASSDAL 157
>ref|NP_177672.1| bZIP transcription factor ATB2, putative; protein id: At1g75390.1
[Arabidopsis thaliana] gi|25345497|pir||D96784
hypothetical protein F1B16.8 [imported] - Arabidopsis
thaliana gi|10120439|gb|AAG13064.1|AC023754_2 similar to
DNA-binding protein [Arabidopsis thaliana]
gi|28466851|gb|AAO44034.1| At1g75390 [Arabidopsis
thaliana]
Length = 167
Score = 58.9 bits (141), Expect = 7e-08
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 12/84 (14%)
Frame = -2
Query: 732 LSVEAENSVLRAQMGELSNRLESLNEIIEVLNANSAAFGTTFTEPSNGFF--------FN 577
+++EAEN +LRAQ+ EL++RL+SLNEI++ + ++S+ FG E G F N
Sbjct: 87 VTIEAENDILRAQVLELNHRLQSLNEIVDFVESSSSGFG---METGQGLFDGGLFDGVMN 143
Query: 576 PLSMSYLNQQIMPSA----DMLQC 517
P+++ + NQ IM SA D+ C
Sbjct: 144 PMNLGFYNQPIMASASTAGDVFNC 167
>emb|CAA68078.1| bZIP transcription factor [Arabidopsis thaliana]
gi|1865679|emb|CAB04795.1| ATB2 [Arabidopsis thaliana]
gi|10443483|gb|AAG17475.1|AF053940_1 transcription
factor GBF6 [Arabidopsis thaliana]
Length = 160
Score = 58.9 bits (141), Expect = 7e-08
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 11/81 (13%)
Frame = -2
Query: 732 LSVEAENSVLRAQMGELSNRLESLNEIIEVL-----NANSAAFGTTFTEPSNG-----FF 583
L+VEAENSVLRAQ+ EL++RL+SLN+IIE L N N+ G + P G FF
Sbjct: 79 LTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNNNNNMGMC-SNPLVGLECDDFF 137
Query: 582 FNPLSMSY-LNQQIMPSADML 523
N ++MSY +NQ +M S+D L
Sbjct: 138 VNQMNMSYIMNQPLMASSDAL 158
>gb|AAD21199.1| putative bZIP DNA-binding protein [Capsicum chinense]
Length = 167
Score = 53.9 bits (128), Expect = 2e-06
Identities = 27/52 (51%), Positives = 38/52 (72%)
Frame = -2
Query: 732 LSVEAENSVLRAQMGELSNRLESLNEIIEVLNANSAAFGTTFTEPSNGFFFN 577
L+VEAENS+LRAQ+ ELS+RLESLNEII ++AN++ + + + FN
Sbjct: 82 LNVEAENSILRAQLSELSHRLESLNEIIAYMDANNSCSNGLAMDHNEPYSFN 133
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 579,853,989
Number of Sequences: 1393205
Number of extensions: 11956427
Number of successful extensions: 25150
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 24445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25142
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34625071581
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
