Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001825A_C01 KMC001825A_c01
(590 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA63894.1| aspartate aminotransferase [Lotus japonicus] 119 4e-26
gb|AAL09704.1|AF419301_1 aspartate aminotransferase [Securigera ... 111 8e-24
ref|NP_196713.1| aspartate aminotransferase (Asp3); protein id: ... 110 2e-23
gb|AAA33408.1| aspartate aminotransferase P1 110 2e-23
gb|AAA50160.1| aspartate aminotransferase P1 110 2e-23
>emb|CAA63894.1| aspartate aminotransferase [Lotus japonicus]
Length = 418
Score = 119 bits (297), Expect = 4e-26
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = -1
Query: 590 IKSIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTRAS 414
IKSIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTRAS
Sbjct: 360 IKSIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTRAS 418
>gb|AAL09704.1|AF419301_1 aspartate aminotransferase [Securigera parviflora]
Length = 341
Score = 111 bits (277), Expect = 8e-24
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = -1
Query: 590 IKSIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTR 420
IK IGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTV HLADAIHAAVTR
Sbjct: 283 IKQIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVSHLADAIHAAVTR 339
>ref|NP_196713.1| aspartate aminotransferase (Asp3); protein id: At5g11520.1,
supported by cDNA: gi_15292662, supported by cDNA:
gi_19310620, supported by cDNA: gi_693691 [Arabidopsis
thaliana] gi|1168258|sp|P46644|AAT3_ARATH Aspartate
aminotransferase, chloroplast precursor (Transaminase A)
gi|11258882|pir||T48511 aspartate transaminase (EC
2.6.1.1) Asp3 F15N18.110 [similarity] - Arabidopsis
thaliana gi|693692|gb|AAA79371.1| aspartate
aminotransferase gi|7573409|emb|CAB87712.1| aspartate
aminotransferase (Asp3) [Arabidopsis thaliana]
gi|15292663|gb|AAK92700.1| putative aspartate
aminotransferase Asp3 [Arabidopsis thaliana]
gi|19310621|gb|AAL85041.1| putative aspartate
aminotransferase ASP3 [Arabidopsis thaliana]
Length = 449
Score = 110 bits (274), Expect = 2e-23
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = -1
Query: 590 IKSIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTRA 417
IK IGMFTFTGLNP QVSFMTKEYHIY+TSDGRISMAGLSSKTVPHLADAIHA VT+A
Sbjct: 391 IKQIGMFTFTGLNPAQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAVVTKA 448
>gb|AAA33408.1| aspartate aminotransferase P1
Length = 420
Score = 110 bits (274), Expect = 2e-23
Identities = 54/57 (94%), Positives = 55/57 (95%)
Frame = -1
Query: 590 IKSIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTR 420
IK IGMFTFTGLN EQVSF+TKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTR
Sbjct: 362 IKQIGMFTFTGLNAEQVSFLTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTR 418
>gb|AAA50160.1| aspartate aminotransferase P1
Length = 420
Score = 110 bits (274), Expect = 2e-23
Identities = 54/57 (94%), Positives = 55/57 (95%)
Frame = -1
Query: 590 IKSIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTR 420
IK IGMFTFTGLN EQVSF+TKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTR
Sbjct: 362 IKQIGMFTFTGLNAEQVSFLTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAAVTR 418
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,631,415
Number of Sequences: 1393205
Number of extensions: 10159602
Number of successful extensions: 21090
Number of sequences better than 10.0: 223
Number of HSP's better than 10.0 without gapping: 20557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21083
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
