Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001817A_C01 KMC001817A_c01
(630 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08124 ferritin 2 precursor - cowpea gi|2970654|gb|AAC06027... 168 6e-41
dbj|BAB64536.1| ferritin [Glycine max] 165 5e-40
dbj|BAB64537.1| ferritin [Glycine max] 160 1e-38
emb|CAA65771.1| ferritin [Medicago sativa] 153 2e-36
ref|NP_181559.1| putative ferritin; protein id: At2g40300.1, sup... 153 2e-36
>pir||T08124 ferritin 2 precursor - cowpea gi|2970654|gb|AAC06027.1| ferritin
subunit cowpea2 precursor [Vigna unguiculata]
Length = 250
Score = 168 bits (425), Expect = 6e-41
Identities = 83/93 (89%), Positives = 89/93 (95%)
Frame = -3
Query: 628 VMPLSEFDHADKGDALHAMELALSLEKLVSEKLLNLHNVASKTGDVQLADFVESEFLVEQ 449
VMPLSEFDHADKGDALHAMELALSLEKL +EKLL+LH+VA+K GDVQLADFVESEFL EQ
Sbjct: 153 VMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQ 212
Query: 448 VEAIKKISEYVAQLRLVGKGHGVWHFDQMLLHE 350
VE+IK+ISEYVAQLR VGKGHGVWHFDQMLLHE
Sbjct: 213 VESIKRISEYVAQLRRVGKGHGVWHFDQMLLHE 245
>dbj|BAB64536.1| ferritin [Glycine max]
Length = 256
Score = 165 bits (417), Expect = 5e-40
Identities = 82/93 (88%), Positives = 87/93 (93%)
Frame = -3
Query: 628 VMPLSEFDHADKGDALHAMELALSLEKLVSEKLLNLHNVASKTGDVQLADFVESEFLVEQ 449
VMPLSEFDH +KGDAL+AMELALSLEKL +EKLLNLH+VASK DVQLADF+ESEFL EQ
Sbjct: 159 VMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQ 218
Query: 448 VEAIKKISEYVAQLRLVGKGHGVWHFDQMLLHE 350
VEAIKKISEYVAQLR VGKGHGVWHFDQMLLHE
Sbjct: 219 VEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHE 251
>dbj|BAB64537.1| ferritin [Glycine max]
Length = 247
Score = 160 bits (406), Expect = 1e-38
Identities = 79/93 (84%), Positives = 87/93 (92%)
Frame = -3
Query: 628 VMPLSEFDHADKGDALHAMELALSLEKLVSEKLLNLHNVASKTGDVQLADFVESEFLVEQ 449
VMPLS+FDHADKGDALHAMELALSLEKL +EKLLNLH+VA+K GDVQLADFVE+E+L EQ
Sbjct: 150 VMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQ 209
Query: 448 VEAIKKISEYVAQLRLVGKGHGVWHFDQMLLHE 350
VEAIK+ISEYVAQLR +GHGVWHFDQMLLHE
Sbjct: 210 VEAIKRISEYVAQLRKSWQGHGVWHFDQMLLHE 242
>emb|CAA65771.1| ferritin [Medicago sativa]
Length = 250
Score = 153 bits (387), Expect = 2e-36
Identities = 75/92 (81%), Positives = 84/92 (90%)
Frame = -3
Query: 628 VMPLSEFDHADKGDALHAMELALSLEKLVSEKLLNLHNVASKTGDVQLADFVESEFLVEQ 449
V P SEFDHA+KGDAL+AMELALSLEKLV+EKLLN+H+VA + D QLA+F+ESEFLVEQ
Sbjct: 159 VSPPSEFDHAEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQLANFIESEFLVEQ 218
Query: 448 VEAIKKISEYVAQLRLVGKGHGVWHFDQMLLH 353
VE+IKKISEYV QLRLVGKGHGVWHFDQ LLH
Sbjct: 219 VESIKKISEYVTQLRLVGKGHGVWHFDQTLLH 250
>ref|NP_181559.1| putative ferritin; protein id: At2g40300.1, supported by cDNA:
gi_17065437, supported by cDNA: gi_20148572 [Arabidopsis
thaliana] gi|25295920|pir||G84827 probable ferritin
[imported] - Arabidopsis thaliana
gi|4586047|gb|AAD25665.1| putative ferritin [Arabidopsis
thaliana] gi|4588004|gb|AAD25945.1|AF085279_18
hypothetical ferritin subunit [Arabidopsis thaliana]
gi|17065438|gb|AAL32873.1| putative ferritin
[Arabidopsis thaliana] gi|18072930|emb|CAC85400.1|
ferritin subunit 4 [Arabidopsis thaliana]
gi|20148573|gb|AAM10177.1| putative ferritin
[Arabidopsis thaliana]
Length = 259
Score = 153 bits (387), Expect = 2e-36
Identities = 76/91 (83%), Positives = 82/91 (89%)
Frame = -3
Query: 628 VMPLSEFDHADKGDALHAMELALSLEKLVSEKLLNLHNVASKTGDVQLADFVESEFLVEQ 449
VMPLSEF+H DKGDAL+ MELALSLEKLV+EKLLNLH+VASK DV LADF+ESEFL EQ
Sbjct: 167 VMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQ 226
Query: 448 VEAIKKISEYVAQLRLVGKGHGVWHFDQMLL 356
VEAIK ISEYVAQLR VGKGHG WHF+QMLL
Sbjct: 227 VEAIKLISEYVAQLRRVGKGHGTWHFNQMLL 257
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 491,593,250
Number of Sequences: 1393205
Number of extensions: 9559407
Number of successful extensions: 21502
Number of sequences better than 10.0: 243
Number of HSP's better than 10.0 without gapping: 20843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21484
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
