Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001806A_C01 KMC001806A_c01
(528 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA16118.1| phosphatase [Plasmodium yoelii yoelii] 36 0.24
ref|NP_700598.1| hypothetical protein [Plasmodium falciparum 3D7... 36 0.24
ref|NP_702125.1| hypothetical protein [Plasmodium falciparum 3D7... 35 0.54
ref|NP_113333.1| hypothetical protein [Guillardia theta] gi|2539... 33 1.6
dbj|BAC65248.1| brain factor 1 [Oryzias latipes] 32 4.6
>gb|EAA16118.1| phosphatase [Plasmodium yoelii yoelii]
Length = 744
Score = 36.2 bits (82), Expect = 0.24
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = -2
Query: 524 VNESSHVHRNLVRTQSFSLPDLVDDNVKDDNCKQSDHENNGKWIIADDAIISSSVQPVNK 345
+NE S + +N +T + + + V DN+++DN K+S + NN K I +D + +Q +NK
Sbjct: 50 INEDSVIQKN-EKTTNKHINNYVYDNIEEDNVKESQNINNLKNKINEDE-QNKYIQYINK 107
Query: 344 ISEKEN 327
EK++
Sbjct: 108 NKEKQS 113
>ref|NP_700598.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23494988|gb|AAN35322.1|AE014830_66 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1438
Score = 36.2 bits (82), Expect = 0.24
Identities = 28/131 (21%), Positives = 61/131 (46%)
Frame = -2
Query: 521 NESSHVHRNLVRTQSFSLPDLVDDNVKDDNCKQSDHENNGKWIIADDAIISSSVQPVNKI 342
N + + + ++ ++ D + N+ +DN QSDH+NN D +IS +K
Sbjct: 141 NNHNENNNDFIKDKNILTNDDKNKNIINDNDVQSDHKNNNVKKKEDTNVISLD----SKY 196
Query: 341 SEKENHGSMLWNMMAELELEDNVMN*AEPKLGTMDVNLHSRSAYLVHAQKQNASR**QLK 162
+EK+N + + N E+++N + G +++ + + ++ +N +L
Sbjct: 197 NEKKNVINFILNNRKNFEIKNNPIVLRSNNNGKINILKNDDNQEYIYINNEN-----ELL 251
Query: 161 CIIVEFKWKCN 129
C +++ KCN
Sbjct: 252 CEVIDV--KCN 260
>ref|NP_702125.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23497303|gb|AAN36849.1|AE014819_60 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1781
Score = 35.0 bits (79), Expect = 0.54
Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Frame = -2
Query: 524 VNESSHVHRNLVRT-----QSFSLPDLVDDNVKDDNC------------KQSDHENNGKW 396
+N+ ++H ++V+ + P+++ D + DDN + ++H NN KW
Sbjct: 915 INKDDYLHTDIVKNIDCVISPYKDPNIIMDRINDDNNINMDNLLFTYNEQMNNHHNNKKW 974
Query: 395 IIADDAIISSSVQPVNKISEKENH 324
+ +++II + + +K N+
Sbjct: 975 NVFNNSIILEKNEKITNSKKKNNY 998
>ref|NP_113333.1| hypothetical protein [Guillardia theta] gi|25396781|pir||B90095
hypothetical protein orf472 [imported] - Guillardia
theta nucleomorph gi|13794515|gb|AAK39890.1|AF165818_98
hypothetical protein [Guillardia theta]
Length = 472
Score = 33.5 bits (75), Expect = 1.6
Identities = 18/53 (33%), Positives = 32/53 (59%), Gaps = 1/53 (1%)
Frame = +1
Query: 7 KLFLLLFPAKHKLYTSILILVLDE-FHTVLVVHINYGENSDRLHFHLNSTIMH 162
++F L F +HKL +SI+ILV +E F +L +N+ +D ++ NS + +
Sbjct: 388 RIFNLCFKIEHKLNSSIIILVKNENFSVILTSLVNFKNIADLKEYNENSELFN 440
>dbj|BAC65248.1| brain factor 1 [Oryzias latipes]
Length = 187
Score = 32.0 bits (71), Expect = 4.6
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -2
Query: 494 LVRTQSFSLPDLVDDNVKDDNCKQSDHENNGKWIIADDAIISSSV---QPVNKISEK 333
++ SFS+ LV + V+ DN Q H+N+ + A+DA + + QP K+S K
Sbjct: 12 MISKSSFSINSLVPEAVQSDNQNQHHHQNHHRSGCAEDAEQKAPLQCAQPEGKVSLK 68
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 415,634,224
Number of Sequences: 1393205
Number of extensions: 8056647
Number of successful extensions: 18844
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18780
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
