Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001803A_C03 KMC001803A_c03
(582 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T11672 quinone oxidoreductase homolog - cowpea gi|1617036|e... 254 7e-67
ref|NP_200959.1| quinone oxidoreductase - like protein; protein ... 212 2e-54
gb|AAL79788.1|AC079874_11 putative quinone oxidoreductase [Oryza... 189 3e-47
gb|AAK31284.1|AC079890_20 putative quinone oxidoreductase [Oryza... 189 3e-47
dbj|BAA06460.1| TED2 [Zinnia elegans] 179 3e-44
>pir||T11672 quinone oxidoreductase homolog - cowpea gi|1617036|emb|CAA69914.1|
Ted2 [Vigna unguiculata]
Length = 324
Score = 254 bits (648), Expect = 7e-67
Identities = 132/138 (95%), Positives = 132/138 (95%)
Frame = -1
Query: 582 HHVIIYKEEDFVARVNEITSGNGVEVVYDSVEKDTFEGSLACLKQRGYMVSFGQSSGSPD 403
HHVIIYKEEDFVARVNEITSGNGVEVVYDSV KDTFEGSLACLK RGYMVSFGQSSGSPD
Sbjct: 187 HHVIIYKEEDFVARVNEITSGNGVEVVYDSVGKDTFEGSLACLKLRGYMVSFGQSSGSPD 246
Query: 402 PVSLSFLAAKSLFLTRPSLMQYVVTRDELLEAARELFAAVASGVLKVRVNHTYPLSEAAK 223
PV LS LAAKSLFLTRPSLMQYVVTRDELLEAA ELFA VASGVLKVRVNHTYPLSEAAK
Sbjct: 247 PVPLSSLAAKSLFLTRPSLMQYVVTRDELLEAAGELFANVASGVLKVRVNHTYPLSEAAK 306
Query: 222 AHEDLENRKTSGSIVLIP 169
AHEDLENRKTSGSIVLIP
Sbjct: 307 AHEDLENRKTSGSIVLIP 324
>ref|NP_200959.1| quinone oxidoreductase - like protein; protein id: At5g61510.1,
supported by cDNA: 37197. [Arabidopsis thaliana]
gi|9758467|dbj|BAB08996.1| quinone oxidoreductase
[Arabidopsis thaliana] gi|21618282|gb|AAM67332.1|
quinone oxidoreductase-like protein [Arabidopsis
thaliana] gi|28393593|gb|AAO42216.1| putative quinone
oxidoreductase [Arabidopsis thaliana]
Length = 324
Score = 212 bits (540), Expect = 2e-54
Identities = 106/138 (76%), Positives = 116/138 (83%)
Frame = -1
Query: 582 HHVIIYKEEDFVARVNEITSGNGVEVVYDSVEKDTFEGSLACLKQRGYMVSFGQSSGSPD 403
HHVI+YK EDFV+RVN+ITSG GV VVYDSV KDTF+GSLACLK RGYMVSFGQSSGSPD
Sbjct: 187 HHVIMYKNEDFVSRVNDITSGKGVNVVYDSVGKDTFKGSLACLKSRGYMVSFGQSSGSPD 246
Query: 402 PVSLSFLAAKSLFLTRPSLMQYVVTRDELLEAARELFAAVASGVLKVRVNHTYPLSEAAK 223
P+ LS LA KSLFLTRPS+M Y TRDELLE A E+FA V SG+LK RVNH YPLS A
Sbjct: 247 PIPLSDLAPKSLFLTRPSMMHYNETRDELLECAGEVFANVTSGILKARVNHKYPLSRVAD 306
Query: 222 AHEDLENRKTSGSIVLIP 169
AH DLENR TSGS+VL+P
Sbjct: 307 AHADLENRITSGSVVLLP 324
>gb|AAL79788.1|AC079874_11 putative quinone oxidoreductase [Oryza sativa]
Length = 337
Score = 189 bits (479), Expect = 3e-47
Identities = 94/138 (68%), Positives = 110/138 (79%)
Frame = -1
Query: 582 HHVIIYKEEDFVARVNEITSGNGVEVVYDSVEKDTFEGSLACLKQRGYMVSFGQSSGSPD 403
HHVIIY EEDFVA+V EITS GV VVYD+V KDTF+GS+ CL RG M+S+GQ SG PD
Sbjct: 193 HHVIIYTEEDFVAQVAEITSRKGVHVVYDAVGKDTFKGSMECLMPRGCMISYGQCSGRPD 252
Query: 402 PVSLSFLAAKSLFLTRPSLMQYVVTRDELLEAARELFAAVASGVLKVRVNHTYPLSEAAK 223
PV +S LA+KSL L RP + Y TRDELL AA E+FA VA+GVL+VRVNH YPL EAA+
Sbjct: 253 PVPVSDLASKSLILGRPGMRHYTATRDELLHAAGEVFAGVAAGVLRVRVNHVYPLHEAAR 312
Query: 222 AHEDLENRKTSGSIVLIP 169
AH DLE R+TSGS+VL+P
Sbjct: 313 AHADLEARRTSGSVVLLP 330
>gb|AAK31284.1|AC079890_20 putative quinone oxidoreductase [Oryza sativa]
Length = 331
Score = 189 bits (479), Expect = 3e-47
Identities = 94/138 (68%), Positives = 110/138 (79%)
Frame = -1
Query: 582 HHVIIYKEEDFVARVNEITSGNGVEVVYDSVEKDTFEGSLACLKQRGYMVSFGQSSGSPD 403
HHVIIY EEDFVA+V EITS GV VVYD+V KDTF+GS+ CL RG M+S+GQ SG PD
Sbjct: 187 HHVIIYTEEDFVAQVAEITSRKGVHVVYDAVGKDTFKGSMECLMPRGCMISYGQCSGRPD 246
Query: 402 PVSLSFLAAKSLFLTRPSLMQYVVTRDELLEAARELFAAVASGVLKVRVNHTYPLSEAAK 223
PV +S LA+KSL L RP + Y TRDELL AA E+FA VA+GVL+VRVNH YPL EAA+
Sbjct: 247 PVPVSDLASKSLILGRPGMRHYTATRDELLHAAGEVFAGVAAGVLRVRVNHVYPLHEAAR 306
Query: 222 AHEDLENRKTSGSIVLIP 169
AH DLE R+TSGS+VL+P
Sbjct: 307 AHADLEARRTSGSVVLLP 324
>dbj|BAA06460.1| TED2 [Zinnia elegans]
Length = 325
Score = 179 bits (453), Expect = 3e-44
Identities = 86/138 (62%), Positives = 109/138 (78%)
Frame = -1
Query: 582 HHVIIYKEEDFVARVNEITSGNGVEVVYDSVEKDTFEGSLACLKQRGYMVSFGQSSGSPD 403
HHVIIYKEE+FV RV EITSG GV+VVYDS+ K TF+GS+ CLK RGY+V FG SG+P+
Sbjct: 188 HHVIIYKEENFVDRVMEITSGKGVDVVYDSIGKSTFQGSMECLKVRGYLVVFGMPSGAPE 247
Query: 402 PVSLSFLAAKSLFLTRPSLMQYVVTRDELLEAARELFAAVASGVLKVRVNHTYPLSEAAK 223
P S LA K ++ T PS+M Y R+EL+ A+ ELF+ + GVL+VRVNH YPLS+AA+
Sbjct: 248 PPSFQQLAEKGIYCTMPSVMLYTKERNELVAASEELFSNIEKGVLRVRVNHKYPLSQAAQ 307
Query: 222 AHEDLENRKTSGSIVLIP 169
AH D+E++KT+GSIVLIP
Sbjct: 308 AHSDIESQKTTGSIVLIP 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 479,480,855
Number of Sequences: 1393205
Number of extensions: 10403753
Number of successful extensions: 24355
Number of sequences better than 10.0: 363
Number of HSP's better than 10.0 without gapping: 23414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24189
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
