Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001761A_C01 KMC001761A_c01
(749 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG16981.1|AF184164_1 transaldolase [Lycopersicon esculentum] 182 7e-56
dbj|BAB89667.1| putative transaldolase [Oryza sativa (japonica c... 179 2e-51
ref|NP_196846.1| transaldolase - like protein; protein id: At5g1... 175 4e-50
pir||T07790 transaldolase (EC 2.2.1.2) - potato gi|2078350|gb|AA... 184 1e-45
ref|NP_284829.1| transaldolase [Neisseria meningitidis Z2491] gi... 98 1e-19
>gb|AAG16981.1|AF184164_1 transaldolase [Lycopersicon esculentum]
Length = 437
Score = 182 bits (461), Expect(2) = 7e-56
Identities = 85/98 (86%), Positives = 94/98 (95%)
Frame = -3
Query: 747 RKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFI 568
+KFSGPRWEALVKKG +KQRLLWASTSVKNPAYPDTLYV PLIGPDTVSTMPDQALQAFI
Sbjct: 310 KKFSGPRWEALVKKGCQKQRLLWASTSVKNPAYPDTLYVDPLIGPDTVSTMPDQALQAFI 369
Query: 567 DHGTVSRTIDSNASEAEGIYNALQKVGVDWSFVGSQLE 454
DHG+V+RTID+N SEAEGIY+AL+K+G+DW FVGSQLE
Sbjct: 370 DHGSVARTIDANLSEAEGIYSALEKLGIDWGFVGSQLE 407
Score = 58.2 bits (139), Expect(2) = 7e-56
Identities = 29/32 (90%), Positives = 32/32 (99%)
Frame = -1
Query: 458 LKLEGVESFKKSFDSLLDSLQEKANSLKLVSL 363
L+LEGV+SFKKSFDSLLDSLQEKAN+LKLVSL
Sbjct: 406 LELEGVDSFKKSFDSLLDSLQEKANTLKLVSL 437
>dbj|BAB89667.1| putative transaldolase [Oryza sativa (japonica cultivar-group)]
gi|20805223|dbj|BAB92890.1| putative transaldolase
[Oryza sativa (japonica cultivar-group)]
Length = 517
Score = 179 bits (453), Expect(2) = 2e-51
Identities = 84/98 (85%), Positives = 92/98 (93%)
Frame = -3
Query: 747 RKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFI 568
+KFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYV PLIGPDTVSTMPDQAL AFI
Sbjct: 389 KKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVDPLIGPDTVSTMPDQALLAFI 448
Query: 567 DHGTVSRTIDSNASEAEGIYNALQKVGVDWSFVGSQLE 454
DHGTVSRTID+N S+AEG+Y+AL+K+G+DW VG QLE
Sbjct: 449 DHGTVSRTIDANVSDAEGVYSALEKLGIDWDEVGKQLE 486
Score = 46.6 bits (109), Expect(2) = 2e-51
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = -1
Query: 458 LKLEGVESFKKSFDSLLDSLQEKANSLK 375
L+LEGV+SFKK+FDSLL SL+EK NSLK
Sbjct: 485 LELEGVDSFKKAFDSLLGSLEEKGNSLK 512
>ref|NP_196846.1| transaldolase - like protein; protein id: At5g13420.1, supported by
cDNA: 32114., supported by cDNA: gi_21280862
[Arabidopsis thaliana] gi|11358882|pir||T48589
transaldolase-like protein - Arabidopsis thaliana
gi|7543909|emb|CAB87149.1| transaldolase-like protein
[Arabidopsis thaliana] gi|15810515|gb|AAL07145.1|
putative transaldolase [Arabidopsis thaliana]
gi|21280863|gb|AAM45123.1| putative transaldolase
[Arabidopsis thaliana] gi|21592744|gb|AAM64693.1|
transaldolase-like protein [Arabidopsis thaliana]
Length = 438
Score = 175 bits (444), Expect(2) = 4e-50
Identities = 83/98 (84%), Positives = 91/98 (92%)
Frame = -3
Query: 747 RKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFI 568
+KFSGPRWEALVKKGAKKQRLLWASTSVKNPAY DTLYVAPLIGPDTVSTMPDQAL+AF
Sbjct: 311 QKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYSDTLYVAPLIGPDTVSTMPDQALEAFA 370
Query: 567 DHGTVSRTIDSNASEAEGIYNALQKVGVDWSFVGSQLE 454
DHG V RTID+N SEAEGIY+AL+K+G+DW+ VG QLE
Sbjct: 371 DHGIVKRTIDANVSEAEGIYSALEKLGIDWNKVGEQLE 408
Score = 45.4 bits (106), Expect(2) = 4e-50
Identities = 22/31 (70%), Positives = 28/31 (89%)
Frame = -1
Query: 458 LKLEGVESFKKSFDSLLDSLQEKANSLKLVS 366
L+ EGV+SFKKSF+SLL +LQ+KAN+LKL S
Sbjct: 407 LEDEGVDSFKKSFESLLGTLQDKANTLKLAS 437
>pir||T07790 transaldolase (EC 2.2.1.2) - potato gi|2078350|gb|AAB54016.1|
transaldolase [Solanum tuberosum]
Length = 438
Score = 184 bits (467), Expect = 1e-45
Identities = 87/98 (88%), Positives = 95/98 (96%)
Frame = -3
Query: 747 RKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFI 568
+KFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYV PLIGPDTVSTMPDQALQAFI
Sbjct: 311 KKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVDPLIGPDTVSTMPDQALQAFI 370
Query: 567 DHGTVSRTIDSNASEAEGIYNALQKVGVDWSFVGSQLE 454
DHG+V+RTID+N SEAEGIY+AL+K+G+DW FVGSQLE
Sbjct: 371 DHGSVARTIDANLSEAEGIYSALEKLGIDWVFVGSQLE 408
Score = 59.7 bits (143), Expect = 4e-08
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = -1
Query: 491 WVLTGALLVPSLKLEGVESFKKSFDSLLDSLQEKANSLKLVSL 363
WV G+ L+LEGV+SFKKSFDSLLDSLQEKAN+LKLV+L
Sbjct: 400 WVFVGS----QLELEGVDSFKKSFDSLLDSLQEKANTLKLVNL 438
>ref|NP_284829.1| transaldolase [Neisseria meningitidis Z2491]
gi|17433189|sp|Q9JSU1|TAL_NEIMA Transaldolase
gi|11354184|pir||E81785 transaldolase (EC 2.2.1.2)
NMA2136 [imported] - Neisseria meningitidis (strain
Z2491 serogroup A) gi|7380757|emb|CAB85348.1|
transaldolase [Neisseria meningitidis Z2491]
Length = 351
Score = 98.2 bits (243), Expect = 1e-19
Identities = 47/96 (48%), Positives = 64/96 (65%)
Frame = -3
Query: 741 FSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFIDH 562
F+ P + AL +GA + +LLWAST VKNPAYPDTLYV LIG TV+T+PD L+AFIDH
Sbjct: 237 FTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSLIGAHTVNTVPDATLKAFIDH 296
Query: 561 GTVSRTIDSNASEAEGIYNALQKVGVDWSFVGSQLE 454
GT T+ A EA+ + +G+D + ++L+
Sbjct: 297 GTAKATLTEGADEAQAQLAEIAALGIDVETLAARLQ 332
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 623,998,266
Number of Sequences: 1393205
Number of extensions: 13080543
Number of successful extensions: 30310
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 29140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30302
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36314099463
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
