Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001758A_C02 KMC001758A_c02
(542 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sanderso... 231 3e-60
gb|AAL69389.1|AF462226_1 putative cysteine proteinase [Narcissus... 226 1e-58
pir||T12040 cysteine proteinase (EC 3.4.22.-) 2 precursor - kidn... 224 5e-58
gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas] 223 1e-57
gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform... 223 1e-57
>gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sandersonia aurantiaca]
Length = 360
Score = 231 bits (590), Expect = 3e-60
Identities = 104/122 (85%), Positives = 115/122 (94%)
Frame = -1
Query: 542 SKIAASASNFSVVSVDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPYICGKHLDHGV 363
+KI+A ASNFSVVS+DEDQIAANLVKHGPLA+GINAVFMQTY+GGVSCPYICGKHLDHGV
Sbjct: 239 AKISAVASNFSVVSIDEDQIAANLVKHGPLAVGINAVFMQTYVGGVSCPYICGKHLDHGV 298
Query: 362 LLVGYGAGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVAAIQT 183
LLVGYG+ ++PIR KEKPYWIIKNSWGE WGENGYYKICRGRNVCGVDSMVS+V+A T
Sbjct: 299 LLVGYGSAGFAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSSVSAFHT 358
Query: 182 NH 177
+H
Sbjct: 359 SH 360
>gb|AAL69389.1|AF462226_1 putative cysteine proteinase [Narcissus pseudonarcissus]
Length = 136
Score = 226 bits (576), Expect = 1e-58
Identities = 104/120 (86%), Positives = 111/120 (91%)
Frame = -1
Query: 542 SKIAASASNFSVVSVDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPYICGKHLDHGV 363
SKIAAS SNFSVVS+DE+QIAANLV+HGPLAIGINA FMQTYIGGVSCPYICGKHLDHGV
Sbjct: 13 SKIAASVSNFSVVSIDEEQIAANLVQHGPLAIGINAAFMQTYIGGVSCPYICGKHLDHGV 72
Query: 362 LLVGYGAGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVAAIQT 183
LLVGYG+ ++PIR KEKPYWIIKNSWGE WGE GYYKIC+GRNVCGVDSMVSTV AI T
Sbjct: 73 LLVGYGSSGWAPIRFKEKPYWIIKNSWGENWGEKGYYKICKGRNVCGVDSMVSTVTAIHT 132
>pir||T12040 cysteine proteinase (EC 3.4.22.-) 2 precursor - kidney bean
gi|2511691|emb|CAB17075.1| cysteine proteinase precursor
[Phaseolus vulgaris]
Length = 365
Score = 224 bits (571), Expect = 5e-58
Identities = 102/121 (84%), Positives = 112/121 (92%)
Frame = -1
Query: 542 SKIAASASNFSVVSVDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPYICGKHLDHGV 363
SKIAAS SN+SV+S+DE+QIAANLVK+GPLA+ INAV+MQTY+GGVSCPYICGKHLDHGV
Sbjct: 243 SKIAASVSNYSVISLDEEQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYICGKHLDHGV 302
Query: 362 LLVGYGAGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVAAIQT 183
LLVGYG GAY+PIR KEKPYWIIKNSWGE WG NGYYKICRGRNVCGVDSMVSTV AI
Sbjct: 303 LLVGYGEGAYAPIRFKEKPYWIIKNSWGENWGGNGYYKICRGRNVCGVDSMVSTVGAIHA 362
Query: 182 N 180
+
Sbjct: 363 S 363
>gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas]
Length = 366
Score = 223 bits (568), Expect = 1e-57
Identities = 102/120 (85%), Positives = 112/120 (93%)
Frame = -1
Query: 542 SKIAASASNFSVVSVDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPYICGKHLDHGV 363
+KIAA +NFSVVS+DEDQIAANLVK+GPLA+ INAVFMQTYIGGVSCPYIC K LDHGV
Sbjct: 243 TKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGV 302
Query: 362 LLVGYGAGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVAAIQT 183
LLVGYG+ Y+PIR+KEKPYWIIKNSWGE+WGENGYYKICRGRNVCGVDSMVSTVAA+ T
Sbjct: 303 LLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAVST 362
>gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine
proteinase isoform III [Ipomoea batatas]
Length = 366
Score = 223 bits (568), Expect = 1e-57
Identities = 102/120 (85%), Positives = 112/120 (93%)
Frame = -1
Query: 542 SKIAASASNFSVVSVDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPYICGKHLDHGV 363
+KIAA +NFSVVS+DEDQIAANLVK+GPLA+ INAVFMQTYIGGVSCPYIC K LDHGV
Sbjct: 243 TKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGV 302
Query: 362 LLVGYGAGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVAAIQT 183
LLVGYG+ Y+PIR+KEKPYWIIKNSWGE+WGENGYYKICRGRNVCGVDSMVSTVAA+ T
Sbjct: 303 LLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAVST 362
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,251,235
Number of Sequences: 1393205
Number of extensions: 11882836
Number of successful extensions: 34263
Number of sequences better than 10.0: 1045
Number of HSP's better than 10.0 without gapping: 31804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33477
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
