Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001754A_C01 KMC001754A_c01
(616 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42800|DAPA_SOYBN Dihydrodipicolinate synthase, chloroplast p... 248 6e-65
pir||S50750 dihydrodipicolinate synthase (EC 4.2.1.52) [similari... 248 6e-65
gb|AAL36299.1| putative dihydrodipicolinate synthase precursor [... 220 1e-56
ref|NP_191647.1| dihydrodipicolinate synthase precursor; protein... 220 1e-56
pir||S46304 dihydrodipicolinate synthase (EC 4.2.1.52) precursor... 219 2e-56
>sp|Q42800|DAPA_SOYBN Dihydrodipicolinate synthase, chloroplast precursor (DHDPS)
gi|548321|gb|AAA73555.1| dihydrodipicolinate synthase
Length = 332
Score = 248 bits (632), Expect = 6e-65
Identities = 117/128 (91%), Positives = 123/128 (95%)
Frame = -2
Query: 615 IVVWSGNDDQCHDARWGYGATGVISVASNLIPGLMRELMFRGENPLLNSRLLPLIDWLFH 436
IVVWSGNDDQCHDARWGYGATGV+SVASNL+PGLMRELMF G NP LNS+LLPLIDWLFH
Sbjct: 205 IVVWSGNDDQCHDARWGYGATGVVSVASNLVPGLMRELMFGGVNPTLNSKLLPLIDWLFH 264
Query: 435 MPNPIGLNTALAQLGVVRPVFRLPFVPLPVDKRIEFANLVKAIGREHFVGDRDVEVLDDD 256
MPNPIGLNTALAQLGV+RPVFRLPFVPLPVDKRIEFANLVK IGREHFVG++ VEVLDDD
Sbjct: 265 MPNPIGLNTALAQLGVIRPVFRLPFVPLPVDKRIEFANLVKEIGREHFVGNKVVEVLDDD 324
Query: 255 DFFLVSRY 232
DFFLVSRY
Sbjct: 325 DFFLVSRY 332
>pir||S50750 dihydrodipicolinate synthase (EC 4.2.1.52) [similarity] - soybean
Length = 326
Score = 248 bits (632), Expect = 6e-65
Identities = 117/128 (91%), Positives = 123/128 (95%)
Frame = -2
Query: 615 IVVWSGNDDQCHDARWGYGATGVISVASNLIPGLMRELMFRGENPLLNSRLLPLIDWLFH 436
IVVWSGNDDQCHDARWGYGATGV+SVASNL+PGLMRELMF G NP LNS+LLPLIDWLFH
Sbjct: 199 IVVWSGNDDQCHDARWGYGATGVVSVASNLVPGLMRELMFGGVNPTLNSKLLPLIDWLFH 258
Query: 435 MPNPIGLNTALAQLGVVRPVFRLPFVPLPVDKRIEFANLVKAIGREHFVGDRDVEVLDDD 256
MPNPIGLNTALAQLGV+RPVFRLPFVPLPVDKRIEFANLVK IGREHFVG++ VEVLDDD
Sbjct: 259 MPNPIGLNTALAQLGVIRPVFRLPFVPLPVDKRIEFANLVKEIGREHFVGNKVVEVLDDD 318
Query: 255 DFFLVSRY 232
DFFLVSRY
Sbjct: 319 DFFLVSRY 326
>gb|AAL36299.1| putative dihydrodipicolinate synthase precursor [Arabidopsis
thaliana] gi|20465357|gb|AAM20082.1| putative
dihydrodipicolinate synthase precursor [Arabidopsis
thaliana]
Length = 365
Score = 220 bits (560), Expect = 1e-56
Identities = 101/128 (78%), Positives = 113/128 (87%)
Frame = -2
Query: 615 IVVWSGNDDQCHDARWGYGATGVISVASNLIPGLMRELMFRGENPLLNSRLLPLIDWLFH 436
IVVWSGNDDQCHD+RW +GATGVISV SNL+PGLMR+LMF G N LN++LLPL+DWLF
Sbjct: 238 IVVWSGNDDQCHDSRWDHGATGVISVTSNLVPGLMRKLMFEGRNSALNAKLLPLMDWLFQ 297
Query: 435 MPNPIGLNTALAQLGVVRPVFRLPFVPLPVDKRIEFANLVKAIGREHFVGDRDVEVLDDD 256
PNPIG+NTALAQLGV RPVFRLP+VPLP+ KRIEF LVK IGREHFVGDRDV+VLDDD
Sbjct: 298 EPNPIGVNTALAQLGVARPVFRLPYVPLPLSKRIEFVKLVKEIGREHFVGDRDVQVLDDD 357
Query: 255 DFFLVSRY 232
DF L+ RY
Sbjct: 358 DFILIGRY 365
>ref|NP_191647.1| dihydrodipicolinate synthase precursor; protein id: At3g60880.1,
supported by cDNA: 37907. [Arabidopsis thaliana]
gi|14547977|sp|Q9LZX6|DAP1_ARATH Dihydrodipicolinate
synthase 1, chloroplast precursor (DHDPS 1)
gi|11268200|pir||T47899 dihydrodipicolinate synthase
precursor - Arabidopsis thaliana
gi|7329698|emb|CAB82692.1| dihydrodipicolinate synthase
precursor [Arabidopsis thaliana]
gi|21593306|gb|AAM65255.1| Dihydrodipicolinate synthase
1, chloroplast precursor (DHDPS 1) [Arabidopsis
thaliana]
Length = 364
Score = 220 bits (560), Expect = 1e-56
Identities = 101/128 (78%), Positives = 113/128 (87%)
Frame = -2
Query: 615 IVVWSGNDDQCHDARWGYGATGVISVASNLIPGLMRELMFRGENPLLNSRLLPLIDWLFH 436
IVVWSGNDDQCHD+RW +GATGVISV SNL+PGLMR+LMF G N LN++LLPL+DWLF
Sbjct: 237 IVVWSGNDDQCHDSRWDHGATGVISVTSNLVPGLMRKLMFEGRNSALNAKLLPLMDWLFQ 296
Query: 435 MPNPIGLNTALAQLGVVRPVFRLPFVPLPVDKRIEFANLVKAIGREHFVGDRDVEVLDDD 256
PNPIG+NTALAQLGV RPVFRLP+VPLP+ KRIEF LVK IGREHFVGDRDV+VLDDD
Sbjct: 297 EPNPIGVNTALAQLGVARPVFRLPYVPLPLSKRIEFVKLVKEIGREHFVGDRDVQVLDDD 356
Query: 255 DFFLVSRY 232
DF L+ RY
Sbjct: 357 DFILIGRY 364
>pir||S46304 dihydrodipicolinate synthase (EC 4.2.1.52) precursor [similarity] -
Arabidopsis thaliana gi|5139329|emb|CAB45642.1|
dihydrodipicolinate synthase [Arabidopsis thaliana]
Length = 364
Score = 219 bits (559), Expect = 2e-56
Identities = 101/128 (78%), Positives = 112/128 (86%)
Frame = -2
Query: 615 IVVWSGNDDQCHDARWGYGATGVISVASNLIPGLMRELMFRGENPLLNSRLLPLIDWLFH 436
IVVWSGNDDQCHD+RW +GATGVISV SNL+PGLMR+LMF G N LN +LLPL+DWLF
Sbjct: 237 IVVWSGNDDQCHDSRWDHGATGVISVTSNLVPGLMRKLMFEGRNSALNEKLLPLMDWLFQ 296
Query: 435 MPNPIGLNTALAQLGVVRPVFRLPFVPLPVDKRIEFANLVKAIGREHFVGDRDVEVLDDD 256
PNPIG+NTALAQLGV RPVFRLP+VPLP+ KRIEF LVK IGREHFVGDRDV+VLDDD
Sbjct: 297 EPNPIGVNTALAQLGVARPVFRLPYVPLPLSKRIEFVKLVKEIGREHFVGDRDVQVLDDD 356
Query: 255 DFFLVSRY 232
DF L+ RY
Sbjct: 357 DFILIGRY 364
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 505,607,692
Number of Sequences: 1393205
Number of extensions: 10536335
Number of successful extensions: 24068
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 23102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24002
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
