Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001753A_C03 KMC001753A_c03
(594 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD66064.1| carbonic anhydrase [Lotus japonicus] 164 9e-40
emb|CAB43571.1| carbonic anhydrase [Glycine max] 126 2e-28
pir||T09570 carbonate dehydratase (EC 4.2.1.1) - alfalfa gi|1938... 122 3e-27
emb|CAD67989.1| carbonic anhydrase [Phaseolus vulgaris] 103 2e-21
sp|P16016|CAHC_SPIOL CARBONIC ANHYDRASE, CHLOROPLAST PRECURSOR (... 91 1e-17
>emb|CAD66064.1| carbonic anhydrase [Lotus japonicus]
Length = 263
Score = 164 bits (416), Expect(2) = 9e-40
Identities = 77/87 (88%), Positives = 79/87 (90%)
Frame = -3
Query: 592 DDWVKIGLPAQIKVLKEHACCDSLEQRTLCEKESVNNSLVNLHTYPFVDRAIRSKGLGLF 413
DDWVKIGLPA+IKVLKEHA CDSLEQRTLCEKESVNNSLVNLHTYPFVD IRSKGLGLF
Sbjct: 174 DDWVKIGLPAKIKVLKEHASCDSLEQRTLCEKESVNNSLVNLHTYPFVDEQIRSKGLGLF 233
Query: 412 GGYYDFVNGEFKLWKYESHFTQHTFYP 332
G YYDFVNGEFKLWKYESH T+H P
Sbjct: 234 GVYYDFVNGEFKLWKYESHVTKHISIP 260
Score = 20.8 bits (42), Expect(2) = 9e-40
Identities = 6/7 (85%), Positives = 7/7 (99%)
Frame = -1
Query: 342 LSIPHCH 322
+SIPHCH
Sbjct: 257 ISIPHCH 263
>emb|CAB43571.1| carbonic anhydrase [Glycine max]
Length = 261
Score = 126 bits (316), Expect = 2e-28
Identities = 59/87 (67%), Positives = 68/87 (77%)
Frame = -3
Query: 592 DDWVKIGLPAQIKVLKEHACCDSLEQRTLCEKESVNNSLVNLHTYPFVDRAIRSKGLGLF 413
DDWVKIGLPA++KVLKE+ D EQ CEKESVNNSLVNL TYP+V++ IR+K + L
Sbjct: 171 DDWVKIGLPAKLKVLKEYEGYDFKEQCKFCEKESVNNSLVNLKTYPYVEKGIRNKNIALL 230
Query: 412 GGYYDFVNGEFKLWKYESHFTQHTFYP 332
GGYYDFV GEFKLWKYESH T+ P
Sbjct: 231 GGYYDFVIGEFKLWKYESHITEPISIP 257
>pir||T09570 carbonate dehydratase (EC 4.2.1.1) - alfalfa
gi|1938227|emb|CAA63712.1| Carbonic anhydrase [Medicago
sativa]
Length = 266
Score = 122 bits (307), Expect = 3e-27
Identities = 56/87 (64%), Positives = 66/87 (75%)
Frame = -3
Query: 592 DDWVKIGLPAQIKVLKEHACCDSLEQRTLCEKESVNNSLVNLHTYPFVDRAIRSKGLGLF 413
DDWVKIGL +++KVLK H C D EQ CE +SVNNSLVNL TYP+VD IR++ L L
Sbjct: 172 DDWVKIGLSSKVKVLKGHECNDFKEQCKFCEMDSVNNSLVNLKTYPYVDSEIRNENLALL 231
Query: 412 GGYYDFVNGEFKLWKYESHFTQHTFYP 332
GGYYDFVNGEFKLWKY++H T+ P
Sbjct: 232 GGYYDFVNGEFKLWKYKTHVTKSVTIP 258
>emb|CAD67989.1| carbonic anhydrase [Phaseolus vulgaris]
Length = 104
Score = 103 bits (257), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = -3
Query: 592 DDWVKIGLPAQIKVLKEHACCDSLEQRTLCEKESVNNSLVNLHTYPFVDRAIRSKGLGLF 413
DDWVKIGLPA+I VLKE+ D EQ CEKESVNNSLVNL TYP+V+R IR+K +GL
Sbjct: 35 DDWVKIGLPAKIDVLKEYEGYDFKEQCKFCEKESVNNSLVNLRTYPYVERGIRNKSIGLL 94
Query: 412 GGYYDFVN 389
GGYYDFVN
Sbjct: 95 GGYYDFVN 102
>sp|P16016|CAHC_SPIOL CARBONIC ANHYDRASE, CHLOROPLAST PRECURSOR (CARBONATE DEHYDRATASE)
gi|99567|pir||A35163 carbonate dehydratase (EC 4.2.1.1)
precursor, chloroplast - spinach
gi|170105|gb|AAA34027.1| carbonic anhydrase (EC 4.2.1.1)
Length = 319
Score = 90.5 bits (223), Expect = 1e-17
Identities = 47/77 (61%), Positives = 52/77 (67%)
Frame = -3
Query: 592 DDWVKIGLPAQIKVLKEHACCDSLEQRTLCEKESVNNSLVNLHTYPFVDRAIRSKGLGLF 413
+DWVKI LPA+ KVL EH EQ T CEKE+VN SL NL TYPFV + K L L
Sbjct: 234 EDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQ 293
Query: 412 GGYYDFVNGEFKLWKYE 362
GGYYDFVNG F+LW E
Sbjct: 294 GGYYDFVNGSFELWGLE 310
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 482,136,801
Number of Sequences: 1393205
Number of extensions: 9650186
Number of successful extensions: 18528
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 18137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18522
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
