Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001731A_C01 KMC001731A_c01
(498 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T07793 uncoupling protein (clone StUCP7), mitochonrial - po... 72 3e-12
gb|AAL82482.1|AF472619_1 putative uncoupling protein [Lycopersic... 71 6e-12
pir||T52024 uncoupling protein [imported] - Arabidopsis thaliana... 68 6e-11
ref|NP_190979.1| uncoupling protein (ucp/PUMP); protein id: At3g... 68 6e-11
dbj|BAA92172.1| SfUCPa [Symplocarpus foetidus] 62 3e-09
>pir||T07793 uncoupling protein (clone StUCP7), mitochonrial - potato
gi|2398829|emb|CAA72107.1| mitochondrial uncoupling
protein [Solanum tuberosum] gi|6318246|emb|CAB60277.1|
UCP [Solanum tuberosum]
Length = 306
Score = 72.4 bits (176), Expect = 3e-12
Identities = 33/35 (94%), Positives = 34/35 (96%)
Frame = -3
Query: 496 FYRGFIPNFGRLGSWNVIMFLTLEQTKKFVKSLES 392
FY+GFIPNFGRLGSWNVIMFLTLEQ KKFVKSLES
Sbjct: 271 FYKGFIPNFGRLGSWNVIMFLTLEQAKKFVKSLES 305
>gb|AAL82482.1|AF472619_1 putative uncoupling protein [Lycopersicon esculentum]
Length = 306
Score = 71.2 bits (173), Expect = 6e-12
Identities = 32/35 (91%), Positives = 34/35 (96%)
Frame = -3
Query: 496 FYRGFIPNFGRLGSWNVIMFLTLEQTKKFVKSLES 392
FY+GFIPNFGRLGSWNVIMFLTLEQ KKFVK+LES
Sbjct: 271 FYKGFIPNFGRLGSWNVIMFLTLEQAKKFVKNLES 305
>pir||T52024 uncoupling protein [imported] - Arabidopsis thaliana
gi|3115108|emb|CAA11757.1| plant uncoupling
mitochondrial protein [Arabidopsis thaliana]
Length = 306
Score = 67.8 bits (164), Expect = 6e-11
Identities = 29/36 (80%), Positives = 34/36 (93%)
Frame = -3
Query: 496 FYRGFIPNFGRLGSWNVIMFLTLEQTKKFVKSLESS 389
FY+GFIPNFGRLGSWNVIMFLTLEQ KK+V+ L++S
Sbjct: 268 FYKGFIPNFGRLGSWNVIMFLTLEQAKKYVRELDAS 303
>ref|NP_190979.1| uncoupling protein (ucp/PUMP); protein id: At3g54110.1, supported
by cDNA: gi_15810466, supported by cDNA: gi_20259562,
supported by cDNA: gi_7673022 [Arabidopsis thaliana]
gi|11277068|pir||T47570 uncoupling protein [imported] -
Arabidopsis thaliana gi|3451392|emb|CAA04638.1|
mitochondrial uncoupling protein [Arabidopsis thaliana]
gi|4127446|emb|CAA77109.1| uncoupling protein
[Arabidopsis thaliana] gi|6822057|emb|CAB70985.1|
uncoupling protein (ucp/PUMP) [Arabidopsis thaliana]
gi|7673023|gb|AAF66705.1|AF146226_1 putative uncoupling
protein PUMP2 [Arabidopsis thaliana]
gi|15810467|gb|AAL07121.1| putative uncoupling protein
ucp/PUMP [Arabidopsis thaliana]
gi|20259563|gb|AAM14124.1| putative uncoupling protein
[Arabidopsis thaliana]
Length = 306
Score = 67.8 bits (164), Expect = 6e-11
Identities = 29/36 (80%), Positives = 34/36 (93%)
Frame = -3
Query: 496 FYRGFIPNFGRLGSWNVIMFLTLEQTKKFVKSLESS 389
FY+GFIPNFGRLGSWNVIMFLTLEQ KK+V+ L++S
Sbjct: 268 FYKGFIPNFGRLGSWNVIMFLTLEQAKKYVRELDAS 303
>dbj|BAA92172.1| SfUCPa [Symplocarpus foetidus]
Length = 303
Score = 62.4 bits (150), Expect = 3e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 496 FYRGFIPNFGRLGSWNVIMFLTLEQTKKF 410
FY+GFIPNFGRLGSWNVIMFLTLEQ KKF
Sbjct: 268 FYKGFIPNFGRLGSWNVIMFLTLEQVKKF 296
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 393,088,238
Number of Sequences: 1393205
Number of extensions: 7510112
Number of successful extensions: 15049
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 14762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15046
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
